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Acta Crystallographica Section E: Structure Reports Online logoLink to Acta Crystallographica Section E: Structure Reports Online
. 2012 Jun 30;68(Pt 7):o2295. doi: 10.1107/S1600536812028619

Diimidazolium phthalate monohydrate

Chua-Hua Yu a,*
PMCID: PMC3394071  PMID: 22798936

Abstract

In the title compound, 2C3H5N2 +·C8H4O4 2−·H2O, the cations, anion and water mol­ecule are connected by N—H⋯O and O—H⋯O hydrogen bonds, forming a three-dimensional network.

Related literature  

The title compound was synthesized during a search for ferroelectric materials. For background to ferroelectric organic materials with framework structures, see: Zhang et al. (2009, 2010); Zhang & Xiong (2012). For related structures, see: Yu & Zhu (2012); Zhu & Yu (2011).graphic file with name e-68-o2295-scheme1.jpg

Experimental  

Crystal data  

  • 2C3H5N2 +·C8H4O4 2−·H2O

  • M r = 320.31

  • Monoclinic, Inline graphic

  • a = 9.1250 (18) Å

  • b = 12.979 (3) Å

  • c = 13.549 (3) Å

  • β = 103.85 (3)°

  • V = 1558.0 (6) Å3

  • Z = 4

  • Mo Kα radiation

  • μ = 0.11 mm−1

  • T = 293 K

  • 0.32 × 0.28 × 0.26 mm

Data collection  

  • Rigaku SCXmini diffractometer

  • Absorption correction: multi-scan (CrystalClear; Rigaku, 2005) T min = 0.967, T max = 0.973

  • 15753 measured reflections

  • 3567 independent reflections

  • 2758 reflections with I > 2σ(I)

  • R int = 0.044

  • 3 standard reflections every 180 reflections intensity decay: none

Refinement  

  • R[F 2 > 2σ(F 2)] = 0.058

  • wR(F 2) = 0.141

  • S = 1.10

  • 3567 reflections

  • 208 parameters

  • H-atom parameters constrained

  • Δρmax = 0.32 e Å−3

  • Δρmin = −0.50 e Å−3

Data collection: CrystalClear (Rigaku, 2005); cell refinement: CrystalClear; data reduction: CrystalClear; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008); molecular graphics: DIAMOND (Brandenburg & Putz, 2005); software used to prepare material for publication: SHELXL97.

Supplementary Material

Crystal structure: contains datablock(s) I, global. DOI: 10.1107/S1600536812028619/go2058sup1.cif

e-68-o2295-sup1.cif (17.6KB, cif)

Structure factors: contains datablock(s) I. DOI: 10.1107/S1600536812028619/go2058Isup2.hkl

e-68-o2295-Isup2.hkl (174.8KB, hkl)

Supplementary material file. DOI: 10.1107/S1600536812028619/go2058Isup3.cml

Additional supplementary materials: crystallographic information; 3D view; checkCIF report

Table 1. Hydrogen-bond geometry (Å, °).

D—H⋯A D—H H⋯A DA D—H⋯A
N1—H1A⋯O1 0.96 1.71 2.665 (2) 170
N2—H2A⋯O2i 0.91 1.75 2.655 (2) 172
N3—H3A⋯O3 0.95 1.80 2.747 (2) 177
N3—H3A⋯O4 0.95 2.56 3.191 (2) 124
N4—H4A⋯O3ii 0.86 1.93 2.774 (2) 168
O1W—H1WA⋯O4 0.86 1.98 2.834 (2) 170
O1W—H1WB⋯O2iii 0.90 1.94 2.8326 (19) 172

Symmetry codes: (i) Inline graphic; (ii) Inline graphic; (iii) Inline graphic.

Acknowledgments

The author thanks the Ordered Matter Science Research Center, Southeast University.

supplementary crystallographic information

Comment

In our search for potential ferroelectric phase change materials, the title compound was synthesized. This search is carried out by measurement of the dielectric constant of compounds on the basis of temperature, for eaxmple, (Zhang, Chen et al., 2009; Zhang, Ye et al., 2010; Zhang & Xiong, 2012), this has been carried out for C3H5N2+.C2HO4- (Yu & Zhu, 2012) and C5H9N2+.C8H5O4- (Zhu & Yu, 2011). In the case of the title compound no dielectric anomaly was observed ranging from 130 K to 375 K.

The crystal structure of the title compound contains two protonated imidazolium cations, one phthalate anion, losing two H atoms, and one molecule of water molecule is shown in Fig. 1. The asymmetric unit was selected with the cations, anion and water molecule connected by the intramolecular hydrogen bonds, N1–1A···O1, N3–H3A···O3, N3–H3A···O4 and O1W–H1WA···O4 all of which connect the cations and the water molecule to the anion, Table 1. These units are connected by the intermolecular hydrogen bonds, N2–H2A···O2(-1+x,y,z), N4-H4A···O3(-x+1/2,y-1/2,-z+1/2) and O1W–H1WB···O2(-x+2,-y+1,-z+1), to form a three-dimensional network Table2 and Figure 1.

Experimental

0.83 g (5 mmol) of phthalic acid was added to in 10 ml water which was heated. A few drops of ethanol and 0.68 g (10 mmol) imidazole were added to the solution. The mixture was stirreduntil it reached ambient temperature, the liquid was filtered to give a clear solution. Colourless crystals suitable for X-ray structure analysis were obtained by the slow evaporation of the solution after several days at the ambient temperature.

Refinement

H atoms attached to C were placed in calculated positions (C—H = 0.93 Å for Csp2 atoms) while those attached to N and O were found in positions derived from a difference electron density map, with Uiso(H) = 1.2 Uiso(C, N), Uiso(H) = 1.5 Uiso(O). The -2 0 2 reflection was omitted since its measured value appear to be anomalous.

Figures

Fig. 1.

Fig. 1.

A diagram of the title compound, with displacement ellipsoids drawn at the 30% probability level. The atomic numbering scheme is shown.

Fig. 2.

Fig. 2.

A view of the packing diagram of the title compound, stacking along the b axis. Hydrogen bonds are shown as dashed lines.

Crystal data

2C3H5N2+·C8H4O42·H2O F(000) = 672
Mr = 320.31 Dx = 1.366 Mg m3
Monoclinic, P21/n Mo Kα radiation, λ = 0.71073 Å
Hall symbol: -P 2yn Cell parameters from 3567 reflections
a = 9.1250 (18) Å θ = 3.1–27.5°
b = 12.979 (3) Å µ = 0.11 mm1
c = 13.549 (3) Å T = 293 K
β = 103.85 (3)° Block, colourless
V = 1558.0 (6) Å3 0.32 × 0.28 × 0.26 mm
Z = 4

Data collection

Rigaku SCXmini diffractometer 2758 reflections with I > 2σ(I)
Radiation source: fine-focus sealed tube Rint = 0.044
Graphite monochromator θmax = 27.5°, θmin = 3.1°
ω scans h = −11→11
Absorption correction: multi-scan (CrystalClear; Rigaku, 2005) k = −16→16
Tmin = 0.967, Tmax = 0.973 l = −17→17
15753 measured reflections 3 standard reflections every 180 reflections
3567 independent reflections intensity decay: none

Refinement

Refinement on F2 Primary atom site location: structure-invariant direct methods
Least-squares matrix: full Secondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.058 Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.141 H-atom parameters constrained
S = 1.10 w = 1/[σ2(Fo2) + (0.0667P)2 + 0.3812P] where P = (Fo2 + 2Fc2)/3
3567 reflections (Δ/σ)max < 0.001
208 parameters Δρmax = 0.32 e Å3
0 restraints Δρmin = −0.50 e Å3

Special details

Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.

Fractional atomic coordinates and isotropic or equivalent isotropic displacement parameters (Å2)

x y z Uiso*/Ueq
O1 0.67631 (14) 0.59458 (9) 0.53305 (10) 0.0375 (3)
O2 0.92261 (14) 0.61977 (10) 0.57079 (11) 0.0423 (3)
O3 0.45616 (13) 0.66464 (9) 0.28714 (10) 0.0386 (3)
O4 0.67947 (15) 0.59102 (10) 0.30286 (12) 0.0466 (4)
C1 0.66990 (17) 0.75577 (12) 0.37728 (12) 0.0242 (3)
C2 0.64193 (19) 0.85209 (13) 0.33196 (13) 0.0310 (4)
H2 0.5809 0.8575 0.2665 0.037*
C3 0.7038 (2) 0.93997 (13) 0.38309 (14) 0.0385 (4)
H3 0.6833 1.0041 0.3523 0.046*
C4 0.7959 (2) 0.93247 (13) 0.47976 (15) 0.0417 (5)
H4 0.8372 0.9915 0.5144 0.050*
C5 0.8267 (2) 0.83681 (14) 0.52503 (13) 0.0353 (4)
H5 0.8898 0.8319 0.5899 0.042*
C6 0.76452 (17) 0.74796 (12) 0.47483 (12) 0.0254 (3)
C7 0.79001 (18) 0.64612 (13) 0.52933 (12) 0.0266 (4)
C8 0.59838 (19) 0.66201 (12) 0.31870 (12) 0.0275 (4)
N1 0.41475 (17) 0.68481 (12) 0.53530 (12) 0.0390 (4)
H1A 0.5080 0.6559 0.5268 0.047*
N2 0.18863 (17) 0.69028 (12) 0.55394 (12) 0.0375 (4)
H2A 0.0940 0.6703 0.5552 0.045*
C9 0.2907 (2) 0.63160 (14) 0.52810 (15) 0.0385 (4)
H9 0.2770 0.5631 0.5079 0.046*
C10 0.2510 (2) 0.78435 (16) 0.58006 (18) 0.0499 (5)
H10 0.2043 0.8406 0.6021 0.060*
C11 0.3926 (2) 0.78088 (16) 0.5680 (2) 0.0548 (6)
H11 0.4625 0.8344 0.5799 0.066*
N3 0.37146 (18) 0.46491 (12) 0.23556 (11) 0.0375 (4)
H3A 0.4030 0.5339 0.2521 0.045*
N4 0.24322 (18) 0.32527 (12) 0.20991 (12) 0.0403 (4)
H4A 0.1710 0.2820 0.2070 0.048*
C12 0.2391 (2) 0.42411 (14) 0.23263 (15) 0.0398 (4)
H12 0.1560 0.4590 0.2446 0.048*
C13 0.3841 (2) 0.30217 (16) 0.19825 (16) 0.0446 (5)
H13 0.4179 0.2383 0.1820 0.053*
C14 0.4641 (2) 0.39014 (16) 0.21490 (16) 0.0452 (5)
H14 0.5645 0.3983 0.2127 0.054*
O1W 0.99551 (16) 0.57033 (11) 0.32839 (11) 0.0479 (4)
H1WA 0.9020 0.5841 0.3250 0.072*
H1WB 1.0210 0.5131 0.3660 0.072*

Atomic displacement parameters (Å2)

U11 U22 U33 U12 U13 U23
O1 0.0274 (6) 0.0290 (6) 0.0568 (8) −0.0006 (5) 0.0116 (6) 0.0092 (6)
O2 0.0250 (6) 0.0430 (8) 0.0569 (8) 0.0060 (6) 0.0058 (6) 0.0199 (6)
O3 0.0273 (7) 0.0295 (7) 0.0526 (8) −0.0025 (5) −0.0032 (6) −0.0047 (6)
O4 0.0372 (8) 0.0359 (7) 0.0664 (9) 0.0010 (6) 0.0118 (7) −0.0221 (6)
C1 0.0216 (7) 0.0219 (8) 0.0291 (8) −0.0012 (6) 0.0060 (6) −0.0019 (6)
C2 0.0316 (9) 0.0288 (9) 0.0295 (9) 0.0003 (7) 0.0015 (7) 0.0029 (7)
C3 0.0500 (12) 0.0205 (8) 0.0423 (10) −0.0005 (8) 0.0057 (8) 0.0041 (7)
C4 0.0529 (12) 0.0236 (9) 0.0434 (11) −0.0073 (8) 0.0016 (9) −0.0066 (7)
C5 0.0380 (10) 0.0323 (9) 0.0307 (9) −0.0044 (8) −0.0013 (7) −0.0039 (7)
C6 0.0219 (8) 0.0242 (8) 0.0299 (8) 0.0000 (6) 0.0056 (6) 0.0003 (6)
C7 0.0257 (8) 0.0252 (8) 0.0293 (8) 0.0029 (7) 0.0075 (6) 0.0009 (6)
C8 0.0265 (8) 0.0255 (8) 0.0288 (8) −0.0020 (7) 0.0037 (6) −0.0015 (6)
N1 0.0283 (8) 0.0405 (9) 0.0500 (9) 0.0023 (7) 0.0129 (7) 0.0026 (7)
N2 0.0290 (8) 0.0320 (8) 0.0522 (9) −0.0025 (6) 0.0113 (7) −0.0003 (7)
C9 0.0351 (10) 0.0295 (9) 0.0501 (11) 0.0001 (8) 0.0083 (8) −0.0045 (8)
C10 0.0416 (12) 0.0293 (10) 0.0811 (16) −0.0004 (9) 0.0194 (11) −0.0093 (10)
C11 0.0416 (12) 0.0357 (11) 0.0872 (17) −0.0119 (9) 0.0155 (11) −0.0056 (11)
N3 0.0434 (9) 0.0313 (8) 0.0373 (8) −0.0099 (7) 0.0088 (7) −0.0018 (6)
N4 0.0394 (9) 0.0317 (8) 0.0490 (10) −0.0117 (7) 0.0088 (7) −0.0040 (7)
C12 0.0403 (11) 0.0346 (10) 0.0458 (11) −0.0065 (8) 0.0126 (9) −0.0049 (8)
C13 0.0446 (11) 0.0375 (10) 0.0508 (12) 0.0022 (9) 0.0100 (9) −0.0068 (9)
C14 0.0340 (10) 0.0504 (12) 0.0527 (12) −0.0067 (9) 0.0131 (9) −0.0013 (10)
O1W 0.0393 (8) 0.0419 (8) 0.0624 (10) 0.0004 (6) 0.0116 (7) 0.0079 (7)

Geometric parameters (Å, º)

O1—C7 1.246 (2) N2—C9 1.314 (2)
O2—C7 1.253 (2) N2—C10 1.358 (2)
O3—C8 1.266 (2) N2—H2A 0.9055
O4—C8 1.232 (2) C9—H9 0.9300
C1—C2 1.389 (2) C10—C11 1.342 (3)
C1—C6 1.399 (2) C10—H10 0.9300
C1—C8 1.513 (2) C11—H11 0.9300
C2—C3 1.383 (2) N3—C12 1.310 (2)
C2—H2 0.9300 N3—C14 1.360 (3)
C3—C4 1.380 (3) N3—H3A 0.9507
C3—H3 0.9300 N4—C12 1.322 (2)
C4—C5 1.384 (3) N4—C13 1.365 (3)
C4—H4 0.9300 N4—H4A 0.8591
C5—C6 1.389 (2) C12—H12 0.9300
C5—H5 0.9300 C13—C14 1.345 (3)
C6—C7 1.505 (2) C13—H13 0.9300
N1—C9 1.309 (2) C14—H14 0.9300
N1—C11 1.355 (3) O1W—H1WA 0.8623
N1—H1A 0.9615 O1W—H1WB 0.8997
C2—C1—C6 119.30 (14) C9—N2—H2A 125.4
C2—C1—C8 118.78 (14) C10—N2—H2A 126.5
C6—C1—C8 121.91 (14) N1—C9—N2 109.25 (16)
C3—C2—C1 120.73 (15) N1—C9—H9 125.4
C3—C2—H2 119.6 N2—C9—H9 125.4
C1—C2—H2 119.6 C11—C10—N2 107.09 (18)
C4—C3—C2 120.01 (16) C11—C10—H10 126.5
C4—C3—H3 120.0 N2—C10—H10 126.5
C2—C3—H3 120.0 C10—C11—N1 107.11 (18)
C3—C4—C5 119.80 (16) C10—C11—H11 126.4
C3—C4—H4 120.1 N1—C11—H11 126.4
C5—C4—H4 120.1 C12—N3—C14 108.62 (16)
C4—C5—C6 120.81 (16) C12—N3—H3A 127.8
C4—C5—H5 119.6 C14—N3—H3A 123.5
C6—C5—H5 119.6 C12—N4—C13 108.66 (16)
C5—C6—C1 119.34 (15) C12—N4—H4A 125.5
C5—C6—C7 119.47 (14) C13—N4—H4A 125.7
C1—C6—C7 121.02 (14) N3—C12—N4 108.79 (18)
O1—C7—O2 124.02 (15) N3—C12—H12 125.6
O1—C7—C6 117.34 (14) N4—C12—H12 125.6
O2—C7—C6 118.61 (14) C14—C13—N4 106.43 (18)
O4—C8—O3 124.83 (15) C14—C13—H13 126.8
O4—C8—C1 119.42 (15) N4—C13—H13 126.8
O3—C8—C1 115.72 (14) C13—C14—N3 107.50 (18)
C9—N1—C11 108.42 (17) C13—C14—H14 126.2
C9—N1—H1A 124.0 N3—C14—H14 126.2
C11—N1—H1A 127.1 H1WA—O1W—H1WB 108.6
C9—N2—C10 108.12 (16)
C6—C1—C2—C3 −1.4 (3) C2—C1—C8—O4 122.83 (18)
C8—C1—C2—C3 179.38 (16) C6—C1—C8—O4 −56.3 (2)
C1—C2—C3—C4 0.8 (3) C2—C1—C8—O3 −55.5 (2)
C2—C3—C4—C5 0.3 (3) C6—C1—C8—O3 125.37 (17)
C3—C4—C5—C6 −0.7 (3) C11—N1—C9—N2 0.7 (2)
C4—C5—C6—C1 0.1 (3) C10—N2—C9—N1 −0.9 (2)
C4—C5—C6—C7 −175.09 (17) C9—N2—C10—C11 0.7 (3)
C2—C1—C6—C5 1.0 (2) N2—C10—C11—N1 −0.3 (3)
C8—C1—C6—C5 −179.85 (16) C9—N1—C11—C10 −0.2 (3)
C2—C1—C6—C7 176.10 (15) C14—N3—C12—N4 −0.5 (2)
C8—C1—C6—C7 −4.7 (2) C13—N4—C12—N3 0.2 (2)
C5—C6—C7—O1 125.27 (18) C12—N4—C13—C14 0.1 (2)
C1—C6—C7—O1 −49.8 (2) N4—C13—C14—N3 −0.4 (2)
C5—C6—C7—O2 −52.5 (2) C12—N3—C14—C13 0.6 (2)
C1—C6—C7—O2 132.45 (17)

Hydrogen-bond geometry (Å, º)

D—H···A D—H H···A D···A D—H···A
N1—H1A···O1 0.96 1.71 2.665 (2) 170
N2—H2A···O2i 0.91 1.75 2.655 (2) 172
N3—H3A···O3 0.95 1.80 2.747 (2) 177
N3—H3A···O4 0.95 2.56 3.191 (2) 124
N4—H4A···O3ii 0.86 1.93 2.774 (2) 168
O1W—H1WA···O4 0.86 1.98 2.834 (2) 170
O1W—H1WB···O2iii 0.90 1.94 2.8326 (19) 172

Symmetry codes: (i) x−1, y, z; (ii) −x+1/2, y−1/2, −z+1/2; (iii) −x+2, −y+1, −z+1.

Footnotes

Supplementary data and figures for this paper are available from the IUCr electronic archives (Reference: GO2058).

References

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  2. Rigaku (2005). CrystalClear. Rigaku Corporation, Tokyo, Japan.
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  4. Yu, C.-H. & Zhu, R.-Q. (2012). Acta Cryst. E68, o1911. [DOI] [PMC free article] [PubMed]
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Associated Data

This section collects any data citations, data availability statements, or supplementary materials included in this article.

Supplementary Materials

Crystal structure: contains datablock(s) I, global. DOI: 10.1107/S1600536812028619/go2058sup1.cif

e-68-o2295-sup1.cif (17.6KB, cif)

Structure factors: contains datablock(s) I. DOI: 10.1107/S1600536812028619/go2058Isup2.hkl

e-68-o2295-Isup2.hkl (174.8KB, hkl)

Supplementary material file. DOI: 10.1107/S1600536812028619/go2058Isup3.cml

Additional supplementary materials: crystallographic information; 3D view; checkCIF report


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