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. 1988;16(Suppl):r71–r85. doi: 10.1093/nar/16.suppl.r71

Compilation of small RNA sequences

Ram Reddy 1
PMCID: PMC340910  PMID: 2453028

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Selected References

These references are in PubMed. This may not be the complete list of references from this article.

  1. Adams D. S., Herrera R. J., Luhrmann R., Lizardi P. M. Isolation and partial characterization of U1-U6 small RNAs from Bombyx mori. Biochemistry. 1985 Jan 1;24(1):117–125. doi: 10.1021/bi00322a017. [DOI] [PubMed] [Google Scholar]
  2. Adams D. S., Noonan D., Burn T. C., Skinner H. B. A library of trimethylguanosine-capped small RNAs in Physarum polycephalum. Gene. 1987;54(1):93–103. doi: 10.1016/0378-1119(87)90351-9. [DOI] [PubMed] [Google Scholar]
  3. Alonso A., Jorcano J. L., Beck E., Spiess E. Isolation and characterization of Drosophila melanogaster U2 small nuclear RNA genes. J Mol Biol. 1983 Sep 25;169(3):691–705. doi: 10.1016/s0022-2836(83)80165-x. [DOI] [PubMed] [Google Scholar]
  4. Ares M., Jr U2 RNA from yeast is unexpectedly large and contains homology to vertebrate U4, U5, and U6 small nuclear RNAs. Cell. 1986 Oct 10;47(1):49–59. doi: 10.1016/0092-8674(86)90365-x. [DOI] [PubMed] [Google Scholar]
  5. Balmain A., Krumlauf R., Vass J. K., Birnie G. D. Cloning and characterisation of the abundant cytoplasmic 7S RNA from mouse cells. Nucleic Acids Res. 1982 Jul 24;10(14):4259–4277. doi: 10.1093/nar/10.14.4259. [DOI] [PMC free article] [PubMed] [Google Scholar]
  6. Bothwell A. L., Garber R. L., Altman S. Nucleotide sequence and in vitro processing of a precursor molecule to Escherichia coli 4.5 S RNA. J Biol Chem. 1976 Dec 10;251(23):7709–7716. [PubMed] [Google Scholar]
  7. Branlant C., Krol A., Ebel J. P., Lazar E., Haendler B., Jacob M. U2 RNA shares a structural domain with U1, U4, and U5 RNAs. EMBO J. 1982;1(10):1259–1265. doi: 10.1002/j.1460-2075.1982.tb00022.x. [DOI] [PMC free article] [PubMed] [Google Scholar]
  8. Branlant C., Krol A., Lazar E., Haendler B., Jacob M., Galego-Dias L., Pousada C. High evolutionary conservation of the secondary structure and of certain nucleotide sequences of U5 RNA. Nucleic Acids Res. 1983 Dec 10;11(23):8359–8367. doi: 10.1093/nar/11.23.8359. [DOI] [PMC free article] [PubMed] [Google Scholar]
  9. Brownlee G. G. Sequence of 6S RNA of E. coli. Nat New Biol. 1971 Feb 3;229(5):147–149. doi: 10.1038/newbio229147a0. [DOI] [PubMed] [Google Scholar]
  10. Celma M. L., Pan J., Weissman S. M. Studies of low molecular weight RNA from cells infected with adenovirus 2. I. The sequences at the 3' end of VA-RNA I. J Biol Chem. 1977 Dec 25;252(24):9032–9042. [PubMed] [Google Scholar]
  11. Das G., Henning D., Reddy R. Structure, organization, and transcription of Drosophila U6 small nuclear RNA genes. J Biol Chem. 1987 Jan 25;262(3):1187–1193. [PubMed] [Google Scholar]
  12. De Lorenzi M., Rohrer U., Birnstiel M. L. Analysis of a sea urchin gene cluster coding for the small nuclear U7 RNA, a rare RNA species implicated in the 3' editing of histone precursor mRNAs. Proc Natl Acad Sci U S A. 1986 May;83(10):3243–3247. doi: 10.1073/pnas.83.10.3243. [DOI] [PMC free article] [PubMed] [Google Scholar]
  13. Dhundale A., Lampson B., Furuichi T., Inouye M., Inouye S. Structure of msDNA from Myxococcus xanthus: evidence for a long, self-annealing RNA precursor for the covalently linked, branched RNA. Cell. 1987 Dec 24;51(6):1105–1112. doi: 10.1016/0092-8674(87)90596-4. [DOI] [PubMed] [Google Scholar]
  14. Earley J. M., 3rd, Roebuck K. A., Stumph W. E. Three linked chicken U1 RNA genes have limited flanking DNA sequence homologies that reveal potential regulatory signals. Nucleic Acids Res. 1984 Oct 11;12(19):7411–7421. doi: 10.1093/nar/12.19.7411. [DOI] [PMC free article] [PubMed] [Google Scholar]
  15. Forbes D. J., Kirschner M. W., Caput D., Dahlberg J. E., Lund E. Differential expression of multiple U1 small nuclear RNAs in oocytes and embryos of Xenopus laevis. Cell. 1984 Oct;38(3):681–689. doi: 10.1016/0092-8674(84)90263-0. [DOI] [PubMed] [Google Scholar]
  16. Furuichi T., Inouye S., Inouye M. Biosynthesis and structure of stable branched RNA covalently linked to the 5' end of multicopy single-stranded DNA of Stigmatella aurantiaca. Cell. 1987 Jan 16;48(1):55–62. doi: 10.1016/0092-8674(87)90355-2. [DOI] [PubMed] [Google Scholar]
  17. Gerhart E., Wagner H., Nordström K. Structural analysis of an RNA molecule involved in replication control of plasmid R1. Nucleic Acids Res. 1986 Mar 25;14(6):2523–2538. doi: 10.1093/nar/14.6.2523. [DOI] [PMC free article] [PubMed] [Google Scholar]
  18. Griffin B. E. Studies and sequences of Escherichia coli 4.5 S RNA. J Biol Chem. 1975 Jul 25;250(14):5426–5437. [PubMed] [Google Scholar]
  19. Gundelfinger E. D., Di Carlo M., Zopf D., Melli M. Structure and evolution of the 7SL RNA component of the signal recognition particle. EMBO J. 1984 Oct;3(10):2325–2332. doi: 10.1002/j.1460-2075.1984.tb02134.x. [DOI] [PMC free article] [PubMed] [Google Scholar]
  20. Harada F., Kato N., Nishimura S. The nucleotide sequence of nuclear 4.8S RNA of mouse cells. Biochem Biophys Res Commun. 1980 Aug 14;95(3):1332–1340. doi: 10.1016/0006-291x(80)91620-4. [DOI] [PubMed] [Google Scholar]
  21. Harada F., Kato N. Nucleotide sequences of 4.5S RNAs associated with poly(A)-containing RNAs of mouse and hamster cells. Nucleic Acids Res. 1980 Mar 25;8(6):1273–1285. doi: 10.1093/nar/8.6.1273. [DOI] [PMC free article] [PubMed] [Google Scholar]
  22. Harada F., Takeuchi Y., Kato N. Molecular cloning and in vitro transcription of rat 4.5S RNAH genes. Nucleic Acids Res. 1986 Feb 25;14(4):1629–1642. doi: 10.1093/nar/14.4.1629. [DOI] [PMC free article] [PubMed] [Google Scholar]
  23. Haynes S. R., Jelinek W. R. Low molecular weight RNAs transcribed in vitro by RNA polymerase III from Alu-type dispersed repeats in Chinese hamster DNA are also found in vivo. Proc Natl Acad Sci U S A. 1981 Oct;78(10):6130–6134. doi: 10.1073/pnas.78.10.6130. [DOI] [PMC free article] [PubMed] [Google Scholar]
  24. Hoffman M. L., Korf G. M., McNamara K. J., Stumph W. E. Structural and functional analysis of chicken U4 small nuclear RNA genes. Mol Cell Biol. 1986 Nov;6(11):3910–3919. doi: 10.1128/mcb.6.11.3910. [DOI] [PMC free article] [PubMed] [Google Scholar]
  25. Hsu L. M., Zagorski J., Fournier M. J. Cloning and sequence analysis of the Escherichia coli 4.5 S RNA gene. J Mol Biol. 1984 Sep 25;178(3):509–531. doi: 10.1016/0022-2836(84)90236-5. [DOI] [PubMed] [Google Scholar]
  26. Hsu L. M., Zagorski J., Wang Z., Fournier M. J. Escherichia coli 6S RNA gene is part of a dual-function transcription unit. J Bacteriol. 1985 Mar;161(3):1162–1170. doi: 10.1128/jb.161.3.1162-1170.1985. [DOI] [PMC free article] [PubMed] [Google Scholar]
  27. Hughes J. M., Konings D. A., Cesareni G. The yeast homologue of U3 snRNA. EMBO J. 1987 Jul;6(7):2145–2155. doi: 10.1002/j.1460-2075.1987.tb02482.x. [DOI] [PMC free article] [PubMed] [Google Scholar]
  28. Kaneda S., Gotoh O., Seno T., Takeishi K. Nucleotide sequence of Dictyostelium small nuclear RNA Dd8 not homologous to any other sequenced small nuclear RNA. J Biol Chem. 1983 Sep 10;258(17):10606–10613. [PubMed] [Google Scholar]
  29. Kato N., Harada F. New U1 RNA species found in Friend SFFV (spleen focus forming virus)-transformed mouse cells. J Biol Chem. 1985 Jun 25;260(12):7775–7782. [PubMed] [Google Scholar]
  30. Kato N., Harada F. Nucleotide sequence of nuclear 5.7S RNA of mouse cells. Biochem Biophys Res Commun. 1981 Apr 30;99(4):1477–1485. doi: 10.1016/0006-291x(81)90785-3. [DOI] [PubMed] [Google Scholar]
  31. Kato N., Hoshino H., Harada F. Nucleotide sequence of 4.5S RNA (C8 or hY5) from HeLa cells. Biochem Biophys Res Commun. 1982 Sep 16;108(1):363–370. doi: 10.1016/0006-291x(82)91875-7. [DOI] [PubMed] [Google Scholar]
  32. Kazmaier M., Tebb G., Mattaj I. W. Functional characterization of X. laevis U5 snRNA genes. EMBO J. 1987 Oct;6(10):3071–3078. doi: 10.1002/j.1460-2075.1987.tb02614.x. [DOI] [PMC free article] [PubMed] [Google Scholar]
  33. Khandekar P., Saidapet C., Krauskopf M., Zarraga A. M., Lin W. L., Mendola C., Siddiqui M. A. Co-ordinate control of gene expression. Muscle-specific 7 S RNA contains sequences homologous to 3'-untranslated regions of myosin genes and repetitive DNA. J Mol Biol. 1984 Dec 15;180(3):417–435. doi: 10.1016/0022-2836(84)90020-2. [DOI] [PubMed] [Google Scholar]
  34. Kim K., Meyer R. J. Copy-number of broad host-range plasmid R1162 is regulated by a small RNA. Nucleic Acids Res. 1986 Oct 24;14(20):8027–8046. doi: 10.1093/nar/14.20.8027. [DOI] [PMC free article] [PubMed] [Google Scholar]
  35. Kiss T., Antal M., Solymosy F. Plant small nuclear RNAs. II. U6 RNA and a 4.5SI-like RNA are present in plant nuclei. Nucleic Acids Res. 1987 Jan 26;15(2):543–560. doi: 10.1093/nar/15.2.543. [DOI] [PMC free article] [PubMed] [Google Scholar]
  36. Kiss T., Antal M., Solymosy F. Plant small nuclear RNAs. III. The complete primary and secondary structure of broad bean U2 RNA: phylogenetic and functional implications. Nucleic Acids Res. 1987 Feb 11;15(3):1332–1332. doi: 10.1093/nar/15.3.1332. [DOI] [PMC free article] [PubMed] [Google Scholar]
  37. Kiss T., Tóth M., Solymosy F. Plant small nuclear RNAs. Nucleolar U3 snRNA is present in plants: partial characterization. Eur J Biochem. 1985 Oct 15;152(2):259–266. doi: 10.1111/j.1432-1033.1985.tb09192.x. [DOI] [PubMed] [Google Scholar]
  38. Korf G. M., Stumph W. E. Chicken U2 and U1 RNA genes are found in very different genomic environments but have similar promoter structures. Biochemistry. 1986 Apr 22;25(8):2041–2047. doi: 10.1021/bi00356a031. [DOI] [PubMed] [Google Scholar]
  39. Kramerov D. A., Tillib S. V., Ryskov A. P., Georgiev G. P. Nucleotide sequence of small polyadenylated B2 RNA. Nucleic Acids Res. 1985 Sep 25;13(18):6423–6437. doi: 10.1093/nar/13.18.6423. [DOI] [PMC free article] [PubMed] [Google Scholar]
  40. Kretzner L., Rymond B. C., Rosbash M. S. cerevisiae U1 RNA is large and has limited primary sequence homology to metazoan U1 snRNA. Cell. 1987 Aug 14;50(4):593–602. doi: 10.1016/0092-8674(87)90032-8. [DOI] [PubMed] [Google Scholar]
  41. Krol A., Branlant C., Lazar E., Gallinaro H., Jacob M. Primary and secondary structures of chicken, rat and man nuclear U4 RNAs. Homologies with U1 and U5 RNAs. Nucleic Acids Res. 1981 Jun 25;9(12):2699–2716. doi: 10.1093/nar/9.12.2699. [DOI] [PMC free article] [PubMed] [Google Scholar]
  42. Krol A., Carbon P., Ebel J. P., Appel B. Xenopus tropicalis U6 snRNA genes transcribed by Pol III contain the upstream promoter elements used by Pol II dependent U snRNA genes. Nucleic Acids Res. 1987 Mar 25;15(6):2463–2478. doi: 10.1093/nar/15.6.2463. [DOI] [PMC free article] [PubMed] [Google Scholar]
  43. Krol A., Ebel J. P., Rinke J., Luhrmann R. U1, U2 and U5 small nuclear RNAs are found in plants cells. Complete nucleotide sequence of the U5 RNA family from pea nuclei. Nucleic Acids Res. 1983 Dec 20;11(24):8583–8594. doi: 10.1093/nar/11.24.8583. [DOI] [PMC free article] [PubMed] [Google Scholar]
  44. Krol A., Gallinaro H., Lazar E., Jacob M., Branlant C. The nuclear 5S RNAs from chicken, rat and man. U5 RNAs are encoded by multiple genes. Nucleic Acids Res. 1981 Feb 25;9(4):769–787. doi: 10.1093/nar/9.4.769. [DOI] [PMC free article] [PubMed] [Google Scholar]
  45. Krol A., Lund E., Dahlberg J. E. The two embryonic U1 RNA genes of Xenopus laevis have both common and gene-specific transcription signals. EMBO J. 1985 Jun;4(6):1529–1535. doi: 10.1002/j.1460-2075.1985.tb03813.x. [DOI] [PMC free article] [PubMed] [Google Scholar]
  46. Krupp G., Cherayil B., Frendewey D., Nishikawa S., Söll D. Two RNA species co-purify with RNase P from the fission yeast Schizosaccharomyces pombe. EMBO J. 1986 Jul;5(7):1697–1703. doi: 10.1002/j.1460-2075.1986.tb04413.x. [DOI] [PMC free article] [PubMed] [Google Scholar]
  47. Krüger W., Benecke B. J. Structural and functional analysis of a human 7 S K RNA gene. J Mol Biol. 1987 May 5;195(1):31–41. doi: 10.1016/0022-2836(87)90325-1. [DOI] [PubMed] [Google Scholar]
  48. Kunkel G. R., Maser R. L., Calvet J. P., Pederson T. U6 small nuclear RNA is transcribed by RNA polymerase III. Proc Natl Acad Sci U S A. 1986 Nov;83(22):8575–8579. doi: 10.1073/pnas.83.22.8575. [DOI] [PMC free article] [PubMed] [Google Scholar]
  49. Larsson S., Bellett A., Akusjärvi G. VA RNAs from avian and human adenoviruses: dramatic differences in length, sequence, and gene location. J Virol. 1986 May;58(2):600–609. doi: 10.1128/jvi.58.2.600-609.1986. [DOI] [PMC free article] [PubMed] [Google Scholar]
  50. Liu M. H., Reddy R., Henning D., Spector D., Busch H. Primary and secondary structure of dinoflagellate U5 small nuclear RNA. Nucleic Acids Res. 1984 Feb 10;12(3):1529–1542. doi: 10.1093/nar/12.3.1529. [DOI] [PMC free article] [PubMed] [Google Scholar]
  51. Lorberboum H., Digweed M., Erdmann V. A., Servadio Y., Weinstein D., De Groot N., Hochberg A. A. Small cytoplasmic RNAs from human placental free mRNPs. Structure and their effect on in vitro protein synthesis. Eur J Biochem. 1986 Mar 3;155(2):279–287. doi: 10.1111/j.1432-1033.1986.tb09487.x. [DOI] [PubMed] [Google Scholar]
  52. Lund E., Kahan B., Dahlberg J. E. Differential control of U1 small nuclear RNA expression during mouse development. Science. 1985 Sep 20;229(4719):1271–1274. doi: 10.1126/science.2412294. [DOI] [PubMed] [Google Scholar]
  53. Manser T., Gesteland R. F. Human U1 loci: genes for human U1 RNA have dramatically similar genomic environments. Cell. 1982 May;29(1):257–264. doi: 10.1016/0092-8674(82)90110-6. [DOI] [PubMed] [Google Scholar]
  54. Mattaj I. W., Zeller R. Xenopus laevis U2 snRNA genes: tandemly repeated transcription units sharing 5' and 3' flanking homology with other RNA polymerase II transcribed genes. EMBO J. 1983;2(11):1883–1891. doi: 10.1002/j.1460-2075.1983.tb01675.x. [DOI] [PMC free article] [PubMed] [Google Scholar]
  55. McCarthy T. L., Siegel E., Mroczkowski B., Heywood S. M. Characterization of translational-control ribonucleic acid isolated from embryonic chick muscle. Biochemistry. 1983 Feb 15;22(4):935–941. doi: 10.1021/bi00273a035. [DOI] [PubMed] [Google Scholar]
  56. Mizuno T., Chou M. Y., Inouye M. A unique mechanism regulating gene expression: translational inhibition by a complementary RNA transcript (micRNA). Proc Natl Acad Sci U S A. 1984 Apr;81(7):1966–1970. doi: 10.1073/pnas.81.7.1966. [DOI] [PMC free article] [PubMed] [Google Scholar]
  57. Moritz A., Lankat-Buttgereit B., Gross H. J., Goebel W. Common structural features of the genes for two stable RNAs from Halobacterium halobium. Nucleic Acids Res. 1985 Jan 11;13(1):31–43. doi: 10.1093/nar/13.1.31. [DOI] [PMC free article] [PubMed] [Google Scholar]
  58. Mount S. M., Steitz J. A. Sequence of U1 RNA from Drosophila melanogaster: implications for U1 secondary structure and possible involvement in splicing. Nucleic Acids Res. 1981 Dec 11;9(23):6351–6368. doi: 10.1093/nar/9.23.6351. [DOI] [PMC free article] [PubMed] [Google Scholar]
  59. Mowry K. L., Steitz J. A. Identification of the human U7 snRNP as one of several factors involved in the 3' end maturation of histone premessenger RNA's. Science. 1987 Dec 18;238(4834):1682–1687. doi: 10.1126/science.2825355. [DOI] [PubMed] [Google Scholar]
  60. Murphy S., Altruda F., Ullu E., Tripodi M., Silengo L., Melli M. DNA sequences complementary to human 7 SK RNA show structural similarities to the short mobile elements of the mammalian genome. J Mol Biol. 1984 Aug 25;177(4):575–590. doi: 10.1016/0022-2836(84)90038-x. [DOI] [PubMed] [Google Scholar]
  61. Murphy S., Tripodi M., Melli M. A sequence upstream from the coding region is required for the transcription of the 7SK RNA genes. Nucleic Acids Res. 1986 Dec 9;14(23):9243–9260. doi: 10.1093/nar/14.23.9243. [DOI] [PMC free article] [PubMed] [Google Scholar]
  62. Myslinski E., Branlant C., Wieben E. D., Pederson T. The small nuclear RNAs of Drosophila. J Mol Biol. 1984 Dec 25;180(4):927–945. doi: 10.1016/0022-2836(84)90264-x. [DOI] [PubMed] [Google Scholar]
  63. Ohshima Y., Okada N., Tani T., Itoh Y., Itoh M. Nucleotide sequences of mouse genomic loci including a gene or pseudogene for U6 (4.8S) nuclear RNA. Nucleic Acids Res. 1981 Oct 10;9(19):5145–5158. doi: 10.1093/nar/9.19.5145. [DOI] [PMC free article] [PubMed] [Google Scholar]
  64. Pan J., Celma M. L., Weissman S. M. Studies of low molecular weight RNA from cells infected with adenovirus 2. III. The sequence of the promoter for VA-RNA I. J Biol Chem. 1977 Dec 25;252(24):9047–9054. [PubMed] [Google Scholar]
  65. Patterson B., Guthrie C. An essential yeast snRNA with a U5-like domain is required for splicing in vivo. Cell. 1987 Jun 5;49(5):613–624. doi: 10.1016/0092-8674(87)90537-x. [DOI] [PubMed] [Google Scholar]
  66. Reddy R. Compilation of small RNA sequences. Nucleic Acids Res. 1985;13 (Suppl):r155–r163. doi: 10.1093/nar/13.suppl.r155. [DOI] [PMC free article] [PubMed] [Google Scholar]
  67. Reddy R. Compilation of small RNA sequences. Nucleic Acids Res. 1986;14 (Suppl):r61–r72. doi: 10.1093/nar/14.suppl.r61. [DOI] [PMC free article] [PubMed] [Google Scholar]
  68. Reddy R., Henning D., Busch H. Primary and secondary structure of U8 small nuclear RNA. J Biol Chem. 1985 Sep 15;260(20):10930–10935. [PubMed] [Google Scholar]
  69. Reddy R., Henning D., Busch H. Pseudouridine residues in the 5'-terminus of uridine-rich nuclear RNA I (U1 RNA). Biochem Biophys Res Commun. 1981 Feb 27;98(4):1076–1083. doi: 10.1016/0006-291x(81)91221-3. [DOI] [PubMed] [Google Scholar]
  70. Reddy R., Henning D., Chirala S., Rothblum L., Wright D., Busch H. Isolation and characterization of three rat U3 RNA pseudogenes colinear with U3 RNA. J Biol Chem. 1985 May 10;260(9):5715–5719. [PubMed] [Google Scholar]
  71. Reddy R., Henning D., Epstein P., Busch H. Primary and secondary structure of U2 snRNA. Nucleic Acids Res. 1981 Nov 11;9(21):5645–5658. doi: 10.1093/nar/9.21.5645. [DOI] [PMC free article] [PubMed] [Google Scholar]
  72. Reddy R., Henning D., Subrahmanyam C. S., Busch H. Primary and secondary structure of 7-3 (K) RNA of Novikoff hepatoma. J Biol Chem. 1984 Oct 10;259(19):12265–12270. [PubMed] [Google Scholar]
  73. Reddy R., Henning D., Tan E., Busch H. Identification of a La protein binding site in a RNA polymerase III transcript (4.5 I RNA). J Biol Chem. 1983 Jul 10;258(13):8352–8356. [PubMed] [Google Scholar]
  74. Reddy R., Spector D., Henning D., Liu M. H., Busch H. Isolation and partial characterization of dinoflagellate U1-U6 small RNAs homologous to rat U small nuclear RNAs. J Biol Chem. 1983 Nov 25;258(22):13965–13969. [PubMed] [Google Scholar]
  75. Reed R. E., Baer M. F., Guerrier-Takada C., Donis-Keller H., Altman S. Nucleotide sequence of the gene encoding the RNA subunit (M1 RNA) of ribonuclease P from Escherichia coli. Cell. 1982 Sep;30(2):627–636. doi: 10.1016/0092-8674(82)90259-8. [DOI] [PubMed] [Google Scholar]
  76. Reich C., Gardiner K. J., Olsen G. J., Pace B., Marsh T. L., Pace N. R. The RNA component of the Bacillus subtilis RNase P. Sequence, activity, and partial secondary structure. J Biol Chem. 1986 Jun 15;261(17):7888–7893. [PubMed] [Google Scholar]
  77. Roop D. R., Kristo P., Stumph W. E., Tsai M. J., O'Malley B. W. Structure and expression of a chicken gene coding for U1 RNA. Cell. 1981 Mar;23(3):671–680. doi: 10.1016/0092-8674(81)90430-x. [DOI] [PubMed] [Google Scholar]
  78. Rosa M. D., Gottlieb E., Lerner M. R., Steitz J. A. Striking similarities are exhibited by two small Epstein-Barr virus-encoded ribonucleic acids and the adenovirus-associated ribonucleic acids VAI and VAII. Mol Cell Biol. 1981 Sep;1(9):785–796. doi: 10.1128/mcb.1.9.785. [DOI] [PMC free article] [PubMed] [Google Scholar]
  79. Rosen J., Ryder T., Ohtsubo H., Ohtsubo E. Role of RNA transcripts in replication incompatibility and copy number control in antibiotic resistance plasmid derivatives. Nature. 1981 Apr 30;290(5809):794–797. doi: 10.1038/290794a0. [DOI] [PubMed] [Google Scholar]
  80. Saba J. A., Busch H., Wright D., Reddy R. Isolation and characterization of two putative full-length Drosophila U4 small nuclear RNA genes. J Biol Chem. 1986 Jul 5;261(19):8750–8753. [PubMed] [Google Scholar]
  81. Sakamoto H., Kimura N., Nagawa F., Shimura Y. Nucleotide sequence and stability of the RNA component of RNase P from a temperature-sensitive mutant of E. coli. Nucleic Acids Res. 1983 Dec 10;11(23):8237–8251. doi: 10.1093/nar/11.23.8237. [DOI] [PMC free article] [PubMed] [Google Scholar]
  82. Schoeniger L. O., Jelinek W. R. 4.5S RNA is encoded by hundreds of tandemly linked genes, has a short half-life, and is hydrogen bonded in vivo to poly(A)-terminated RNAs in the cytoplasm of cultured mouse cells. Mol Cell Biol. 1986 May;6(5):1508–1519. doi: 10.1128/mcb.6.5.1508. [DOI] [PMC free article] [PubMed] [Google Scholar]
  83. Siliciano P. G., Brow D. A., Roiha H., Guthrie C. An essential snRNA from S. cerevisiae has properties predicted for U4, including interaction with a U6-like snRNA. Cell. 1987 Aug 14;50(4):585–592. doi: 10.1016/0092-8674(87)90031-6. [DOI] [PubMed] [Google Scholar]
  84. Siliciano P. G., Jones M. H., Guthrie C. Saccharomyces cerevisiae has a U1-like small nuclear RNA with unexpected properties. Science. 1987 Sep 18;237(4821):1484–1487. doi: 10.1126/science.3306922. [DOI] [PubMed] [Google Scholar]
  85. Skinner H. B., Adams D. S. Nucleotide sequence of Physarum U6 small RNA. Nucleic Acids Res. 1987 Jan 12;15(1):371–371. doi: 10.1093/nar/15.1.371. [DOI] [PMC free article] [PubMed] [Google Scholar]
  86. Sri-Widada J., Liautard J. P., Assens C., Brunel C. Primary structure identification of snRNAs present in highly purified snRNPs from HeLa cells. Mol Biol Rep. 1981 Nov 30;8(1):29–36. doi: 10.1007/BF00798382. [DOI] [PubMed] [Google Scholar]
  87. Stroke I. L., Weiner A. M. Genes and pseudogenes for rat U3A and U3B small nuclear RNA. J Mol Biol. 1985 Jul 20;184(2):183–193. doi: 10.1016/0022-2836(85)90372-9. [DOI] [PubMed] [Google Scholar]
  88. Strub K., Galli G., Busslinger M., Birnstiel M. L. The cDNA sequences of the sea urchin U7 small nuclear RNA suggest specific contacts between histone mRNA precursor and U7 RNA during RNA processing. EMBO J. 1984 Dec 1;3(12):2801–2807. doi: 10.1002/j.1460-2075.1984.tb02212.x. [DOI] [PMC free article] [PubMed] [Google Scholar]
  89. Suh D., Busch H., Reddy R. Isolation and characterization of a human U3 small nucleolar RNA gene. Biochem Biophys Res Commun. 1986 Jun 30;137(3):1133–1140. doi: 10.1016/0006-291x(86)90343-8. [DOI] [PubMed] [Google Scholar]
  90. Takeuchi Y., Harada F. Cloning and characterization of rat 4.5S RNAI genes. Nucleic Acids Res. 1986 Feb 25;14(4):1643–1656. doi: 10.1093/nar/14.4.1643. [DOI] [PMC free article] [PubMed] [Google Scholar]
  91. Tollervey D., Wise J. A., Guthrie C. A U4-like small nuclear RNA is dispensable in yeast. Cell. 1983 Dec;35(3 Pt 2):753–762. doi: 10.1016/0092-8674(83)90108-3. [DOI] [PubMed] [Google Scholar]
  92. Tschudi C., Richards F. F., Ullu E. The U2 RNA analogue of Trypanosoma brucei gambiense: implications for a splicing mechanism in trypanosomes. Nucleic Acids Res. 1986 Nov 25;14(22):8893–8903. doi: 10.1093/nar/14.22.8893. [DOI] [PMC free article] [PubMed] [Google Scholar]
  93. Ullu E., Murphy S., Melli M. Human 7SL RNA consists of a 140 nucleotide middle-repetitive sequence inserted in an alu sequence. Cell. 1982 May;29(1):195–202. doi: 10.1016/0092-8674(82)90103-9. [DOI] [PubMed] [Google Scholar]
  94. Ullu E., Tschudi C. Alu sequences are processed 7SL RNA genes. Nature. 1984 Nov 8;312(5990):171–172. doi: 10.1038/312171a0. [DOI] [PubMed] [Google Scholar]
  95. Ullu E., Weiner A. M. Human genes and pseudogenes for the 7SL RNA component of signal recognition particle. EMBO J. 1984 Dec 20;3(13):3303–3310. doi: 10.1002/j.1460-2075.1984.tb02294.x. [DOI] [PMC free article] [PubMed] [Google Scholar]
  96. Van Arsdell S. W., Weiner A. M. Human genes for U2 small nuclear RNA are tandemly repeated. Mol Cell Biol. 1984 Mar;4(3):492–499. doi: 10.1128/mcb.4.3.492. [DOI] [PMC free article] [PubMed] [Google Scholar]
  97. Vogel D. W., Hartmann R. K., Struck J. C., Ulbrich N., Erdmann V. A. The sequence of the 6S RNA gene of Pseudomonas aeruginosa. Nucleic Acids Res. 1987 Jun 11;15(11):4583–4591. doi: 10.1093/nar/15.11.4583. [DOI] [PMC free article] [PubMed] [Google Scholar]
  98. Westin G., Lund E., Murphy J. T., Pettersson U., Dahlberg J. E. Human U2 and U1 RNA genes use similar transcription signals. EMBO J. 1984 Dec 20;3(13):3295–3301. doi: 10.1002/j.1460-2075.1984.tb02293.x. [DOI] [PMC free article] [PubMed] [Google Scholar]
  99. Westin G., Zabielski J., Hammarström K., Monstein H. J., Bark C., Pettersson U. Clustered genes for human U2 RNA. Proc Natl Acad Sci U S A. 1984 Jun;81(12):3811–3815. doi: 10.1073/pnas.81.12.3811. [DOI] [PMC free article] [PubMed] [Google Scholar]
  100. Wilusz J., Kurilla M. G., Keene J. D. A host protein (La) binds to a unique species of minus-sense leader RNA during replication of vesicular stomatitis virus. Proc Natl Acad Sci U S A. 1983 Oct;80(19):5827–5831. doi: 10.1073/pnas.80.19.5827. [DOI] [PMC free article] [PubMed] [Google Scholar]
  101. Wise J. A., Weiner A. M. Dictyostelium small nuclear RNA D2 is homologous to rat nucleolar RNA U3 and is encoded by a dispersed multigene family. Cell. 1980 Nov;22(1 Pt 1):109–118. doi: 10.1016/0092-8674(80)90159-2. [DOI] [PubMed] [Google Scholar]
  102. Wolin S. L., Steitz J. A. Genes for two small cytoplasmic Ro RNAs are adjacent and appear to be single-copy in the human genome. Cell. 1983 Mar;32(3):735–744. doi: 10.1016/0092-8674(83)90059-4. [DOI] [PubMed] [Google Scholar]
  103. Wooley J. C., Cone R. D., Tartof D., Chung S. Y. Small nuclear ribonucleoprotein complexes of Drosophila melanogaster. Proc Natl Acad Sci U S A. 1982 Nov;79(22):6762–6766. doi: 10.1073/pnas.79.22.6762. [DOI] [PMC free article] [PubMed] [Google Scholar]
  104. Zeller R., Carri M. T., Mattaj I. W., De Robertis E. M. Xenopus laevis U1 snRNA genes: characterisation of transcriptionally active genes reveals major and minor repeated gene families. EMBO J. 1984 May;3(5):1075–1081. doi: 10.1002/j.1460-2075.1984.tb01931.x. [DOI] [PMC free article] [PubMed] [Google Scholar]

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