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Acta Crystallographica Section E: Structure Reports Online logoLink to Acta Crystallographica Section E: Structure Reports Online
. 2012 Jul 21;68(Pt 8):m1097–m1098. doi: 10.1107/S1600536812032461

Diaqua­bis­[2,6-bis­(4H-1,2,4-triazol-4-yl)pyridine-κN 2]bis­(seleno­cyanato-κN)cobalt(II)

Yuan-Yuan Liu a,*, Pan Yang a
PMCID: PMC3414148  PMID: 22904755

Abstract

In the title compound, [Co(NCSe)2(C9H7N7)2(H2O)2], the Co2+ cation is coordinated by two seleno­cyanate anions, two 2,6-bis­(4H-1,2,4-triazol-4-yl)pyridine ligands and two water mol­ecules within a slightly distorted N4O2 octa­hedron. The asymmetric unit consists of one Co2+ cation, which is located on a center of inversion, as well as one seleno­cyanate anion, one 2,6-bis­(4H-1,2,4-triazol-4-yl)pyridine ligand and one water mol­ecule in general positions. Inter­molecular O—H⋯N hydrogen bonds join the complex mol­ecules into layers parallel to the bc plane. The layers are linked by C—H⋯N and C—H⋯Se hydrogen bonds into a three-dimensional supra­molecular architecture.

Related literature  

For general background to this work, see: Liu et al. (2007). Previous research on compounds with Co(II) as cation have found a slow relaxation of the magnetization, see: Boeckmann & Näther (2010, 2011, 2012). For related structures, see: Du et al. (2009); Yang et al. (2008).graphic file with name e-68-m1097-scheme1.jpg

Experimental  

Crystal data  

  • [Co(NCSe)2(C9H7N7)2(H2O)2]

  • M r = 731.35

  • Monoclinic, Inline graphic

  • a = 17.5460 (16) Å

  • b = 7.2752 (7) Å

  • c = 20.3148 (19) Å

  • β = 95.691 (2)°

  • V = 2580.4 (4) Å3

  • Z = 4

  • Mo Kα radiation

  • μ = 3.54 mm−1

  • T = 173 K

  • 0.15 × 0.14 × 0.13 mm

Data collection  

  • Bruker APEXII CCD diffractometer

  • Absorption correction: multi-scan (SADABS; Sheldrick, 1996) T min = 0.619, T max = 0.656

  • 6336 measured reflections

  • 2280 independent reflections

  • 2083 reflections with I > 2σ(I)

  • R int = 0.026

Refinement  

  • R[F 2 > 2σ(F 2)] = 0.026

  • wR(F 2) = 0.065

  • S = 1.05

  • 2280 reflections

  • 186 parameters

  • H-atom parameters constrained

  • Δρmax = 0.59 e Å−3

  • Δρmin = −0.58 e Å−3

Data collection: APEX2 (Bruker, 2007); cell refinement: SAINT (Bruker, 2007); data reduction: SAINT; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008); molecular graphics: SHELXTL and DIAMOND (Brandenburg, 1999); software used to prepare material for publication: publCIF (Westrip, 2010).

Supplementary Material

Crystal structure: contains datablock(s) global, I. DOI: 10.1107/S1600536812032461/zj2088sup1.cif

e-68-m1097-sup1.cif (18.8KB, cif)

Structure factors: contains datablock(s) I. DOI: 10.1107/S1600536812032461/zj2088Isup2.hkl

e-68-m1097-Isup2.hkl (112.2KB, hkl)

Additional supplementary materials: crystallographic information; 3D view; checkCIF report

Table 1. Selected bond lengths (Å).

Co1—N8 2.097 (2)
Co1—N3 2.122 (2)
Co1—O1 2.1434 (18)

Table 2. Hydrogen-bond geometry (Å, °).

D—H⋯A D—H H⋯A DA D—H⋯A
O1—H1A⋯N2 0.84 2.43 3.017 (3) 127
O1—H1B⋯N7ii 0.84 2.00 2.837 (3) 173
C1—H1⋯N6iii 0.95 2.37 3.293 (3) 163
C5—H5⋯N8iv 0.95 2.56 3.356 (3) 142
C7—H7⋯N6iii 0.95 2.46 3.373 (3) 162
C9—H9⋯Se1iv 0.95 2.96 3.877 (3) 164

Symmetry codes: (ii) Inline graphic; (iii) Inline graphic; (iv) Inline graphic.

Acknowledgments

This work was supported financially by Tianjin Educational Committee (20090504, 20110301) and Tianjin Normal University (1E0402B).

supplementary crystallographic information

Comment

Previously we have reported on the a series of novel zinc(II) and cadmium(II) compounds based on 2,6-di-(1,2,4-triazole-4-yl)pyridine (Liu et al., 2007). On the other hand, dependent on the nature of the metal cation, anti- or ferromagnetic ordering is observed and for the compounds with Co(II) as cation preivous resrarch have found a slow relaxation of the magnetization (Boeckmann & Näther 2010, 2011, 2012). To investigate the influence of the co-ligand on the magnetic properties for the compounds with Co(II), we tried to prepare cobalt(II) compounds based on 2,6-di-(1,2,4-triazole-4-yl)pyridine, which resulted in the formation of the title compound in which the neutral ligands are only terminal N-coordinated. This compound was characterized only by single-crystal X-ray diffraction. In the crystal structure the cobalt(II) cations are coordinated by four nitrogen atoms of two terminal N-bonded seleno-cyanato anions and two terminal bonded 2,6-di-(1,2,4-triazole-4-yl)pyridine co-ligands as well as two water molecules into discrete complexes (Fig. 1). The coordination polyhedron of the Co cations can be described as a slightly distorted octahedron with the Co cation located on a centre of inversion. The discrete cobalt complexes are bridged by intermolecular O—H···N, C—H···N and C—H···Se hydrogen bonds (Yang et al., 2008; Du et al., 2009), wich assemble (I) into a three-dimensional supra-molecular architecture(Fig. 2 and Table 1).

Perspective drawing with the atomic numbering scheme is illustrated in figure 1. Selected geometric parameters (Å, °) for (I) are listed in table 1. Selected hydrogen-bonding geometric parameters (Å, °) for (I) are listed in table 2. The two-dimensional supramolecular framework of (I) is shown in Figure 2.

Experimental

The compound was synthesized under hydrothermal conditions. A mixture of L (L = 1,4-Bis(2,6-Bis(4H-1,2,4-triazol-4-yl)pyridine) (0.3 mmol, 0.0636 g), CoSO4.7H2O (0.1 mmol, 0.028 g), KSeCN (0.2 mmol, 0.029 g) and water (10 ml) was placed in a 25 ml acid digestion bomb and heated at 393 K for two days, then equably cooled to room temperature for three days. After washed by 5 ml water for twice, Red block crystals of the compound were obtained..

Refinement

The water H atoms were located in a Fourier difference map and refined subject to an O—H restraint 0.88 (1) Å and an H···H restraint of 1.42 (2) Å. Other H atoms were allowed to ride on their parent atoms with C—H distances of 0.93 Å (Uiso(H) = 1.2Ueq(C)). All of the non-hydrogen atoms were refined anisotropically..

Figures

Fig. 1.

Fig. 1.

The structure of the title complex, showing 50% probability displacement ellipsoids and the atom-numbering schemes. Atoms of the inversion-related half-complex have symmetry code: (2 - x, y, 1/2 - z).

Fig. 2.

Fig. 2.

The three-dimensional layer structure of the title complex. Purple Dashed lines indicate O—H···N, C—H···N and C—H···Se hydrogen bonds.

Crystal data

[Co(NCSe)2(C9H7N7)2(H2O)2] Z = 4
Mr = 731.35 F(000) = 1444
Monoclinic, C2/c Dx = 1.883 Mg m3
Hall symbol: -C 2yc Mo Kα radiation, λ = 0.71073 Å
a = 17.5460 (16) Å µ = 3.54 mm1
b = 7.2752 (7) Å T = 173 K
c = 20.3148 (19) Å Block, red
β = 95.691 (2)° 0.15 × 0.14 × 0.13 mm
V = 2580.4 (4) Å3

Data collection

Bruker APEXII CCD diffractometer 2280 independent reflections
Radiation source: fine-focus sealed tube 2083 reflections with I > 2σ(I)
Graphite monochromator Rint = 0.026
φ and ω scans θmax = 25.0°, θmin = 2.3°
Absorption correction: multi-scan (SADABS; Sheldrick, 1996) h = −20→9
Tmin = 0.619, Tmax = 0.656 k = −8→8
6336 measured reflections l = −23→24

Refinement

Refinement on F2 0 restraints
Least-squares matrix: full H-atom parameters constrained
R[F2 > 2σ(F2)] = 0.026 w = 1/[σ2(Fo2) + (0.0325P)2 + 4.1522P] where P = (Fo2 + 2Fc2)/3
wR(F2) = 0.065 (Δ/σ)max = 0.002
S = 1.05 Δρmax = 0.59 e Å3
2280 reflections Δρmin = −0.58 e Å3
186 parameters

Special details

Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.

Fractional atomic coordinates and isotropic or equivalent isotropic displacement parameters (Å2)

x y z Uiso*/Ueq
Co1 1.0000 0.85337 (6) 0.2500 0.01309 (13)
Se1 1.238743 (15) 0.51140 (3) 0.329458 (13) 0.02053 (11)
O1 1.08413 (10) 1.0675 (2) 0.26203 (8) 0.0171 (4)
H1A 1.1136 1.0578 0.2321 0.026*
H1B 1.1116 1.0623 0.2983 0.026*
N1 1.01232 (11) 0.7890 (3) 0.04271 (10) 0.0134 (4)
N2 1.08763 (12) 0.9006 (3) 0.12643 (10) 0.0171 (5)
N3 1.01748 (11) 0.8524 (3) 0.14815 (10) 0.0143 (4)
N4 0.91149 (11) 0.6660 (3) −0.02481 (10) 0.0125 (4)
N5 0.80409 (12) 0.5469 (3) −0.08553 (10) 0.0136 (4)
N6 0.69319 (13) 0.4701 (3) −0.05234 (12) 0.0217 (5)
N7 0.68675 (13) 0.4682 (3) −0.12169 (11) 0.0182 (5)
N8 1.09050 (12) 0.6689 (3) 0.27341 (10) 0.0180 (5)
C1 1.08281 (14) 0.8611 (3) 0.06371 (12) 0.0156 (5)
H1 1.1228 0.8797 0.0361 0.019*
C2 0.97369 (14) 0.7874 (3) 0.09813 (12) 0.0139 (5)
H2 0.9227 0.7452 0.0998 0.017*
C3 0.98360 (13) 0.7256 (3) −0.02156 (12) 0.0114 (5)
C4 0.88145 (14) 0.6091 (3) −0.08405 (12) 0.0135 (5)
C5 0.91929 (15) 0.6072 (3) −0.14054 (12) 0.0160 (5)
H5 0.8949 0.5656 −0.1817 0.019*
C6 0.99442 (14) 0.6689 (3) −0.13447 (12) 0.0163 (5)
H6 1.0226 0.6702 −0.1720 0.020*
C7 1.02849 (14) 0.7287 (3) −0.07389 (12) 0.0150 (5)
H7 1.0801 0.7698 −0.0685 0.018*
C8 0.76306 (16) 0.5177 (3) −0.03236 (14) 0.0199 (6)
H8 0.7829 0.5305 0.0126 0.024*
C9 0.75337 (15) 0.5140 (3) −0.13963 (13) 0.0171 (6)
H9 0.7651 0.5233 −0.1842 0.020*
C10 1.14850 (15) 0.6077 (3) 0.29588 (12) 0.0167 (5)

Atomic displacement parameters (Å2)

U11 U22 U33 U12 U13 U23
Co1 0.0104 (2) 0.0163 (2) 0.0123 (2) 0.000 −0.00015 (19) 0.000
Se1 0.01776 (16) 0.02176 (16) 0.02165 (17) 0.00585 (11) −0.00019 (12) 0.00176 (10)
O1 0.0126 (8) 0.0238 (9) 0.0150 (9) −0.0010 (8) 0.0014 (7) −0.0007 (7)
N1 0.0111 (10) 0.0154 (10) 0.0138 (11) −0.0007 (8) 0.0017 (8) −0.0003 (8)
N2 0.0118 (11) 0.0201 (10) 0.0192 (12) −0.0021 (9) 0.0015 (9) −0.0001 (9)
N3 0.0113 (10) 0.0159 (10) 0.0158 (11) −0.0006 (8) 0.0020 (9) 0.0017 (8)
N4 0.0110 (10) 0.0127 (9) 0.0138 (10) 0.0004 (8) 0.0017 (8) 0.0005 (8)
N5 0.0101 (10) 0.0156 (10) 0.0150 (11) −0.0016 (8) 0.0012 (9) −0.0010 (8)
N6 0.0156 (11) 0.0293 (12) 0.0205 (12) −0.0058 (10) 0.0033 (10) −0.0008 (10)
N7 0.0151 (11) 0.0208 (11) 0.0185 (12) −0.0006 (9) 0.0005 (9) −0.0004 (9)
N8 0.0191 (12) 0.0200 (10) 0.0151 (11) 0.0031 (10) 0.0023 (9) −0.0022 (9)
C1 0.0121 (12) 0.0177 (12) 0.0171 (13) −0.0028 (10) 0.0017 (10) −0.0015 (10)
C2 0.0122 (11) 0.0159 (12) 0.0140 (12) −0.0007 (10) 0.0032 (10) 0.0016 (10)
C3 0.0105 (11) 0.0089 (11) 0.0145 (12) 0.0003 (9) −0.0002 (10) 0.0012 (9)
C4 0.0106 (12) 0.0108 (11) 0.0189 (13) −0.0008 (10) 0.0007 (10) 0.0007 (10)
C5 0.0182 (13) 0.0155 (11) 0.0145 (12) −0.0021 (10) 0.0021 (10) −0.0032 (10)
C6 0.0174 (13) 0.0181 (12) 0.0140 (12) 0.0005 (10) 0.0055 (10) 0.0013 (10)
C7 0.0104 (11) 0.0157 (12) 0.0190 (13) 0.0000 (10) 0.0021 (10) 0.0022 (10)
C8 0.0171 (14) 0.0266 (14) 0.0161 (14) −0.0047 (11) 0.0019 (11) −0.0026 (10)
C9 0.0157 (13) 0.0193 (13) 0.0160 (14) −0.0017 (10) 0.0002 (11) −0.0005 (10)
C10 0.0198 (14) 0.0157 (12) 0.0152 (13) 0.0000 (11) 0.0052 (11) −0.0036 (10)

Geometric parameters (Å, º)

Co1—N8i 2.097 (2) N5—C8 1.373 (3)
Co1—N8 2.097 (2) N5—C4 1.428 (3)
Co1—N3i 2.122 (2) N6—C8 1.300 (4)
Co1—N3 2.122 (2) N6—N7 1.402 (3)
Co1—O1 2.1434 (18) N7—C9 1.302 (3)
Co1—O1i 2.1433 (17) N8—C10 1.162 (3)
Se1—C10 1.803 (3) C1—H1 0.9500
O1—H1A 0.8400 C2—H2 0.9500
O1—H1B 0.8400 C3—C7 1.385 (3)
N1—C2 1.371 (3) C4—C5 1.382 (3)
N1—C1 1.372 (3) C5—C6 1.387 (4)
N1—C3 1.429 (3) C5—H5 0.9500
N2—C1 1.301 (3) C6—C7 1.384 (3)
N2—N3 1.393 (3) C6—H6 0.9500
N3—C2 1.300 (3) C7—H7 0.9500
N4—C4 1.331 (3) C8—H8 0.9500
N4—C3 1.333 (3) C9—H9 0.9500
N5—C9 1.365 (3)
N8i—Co1—N8 100.44 (12) C9—N7—N6 107.1 (2)
N8i—Co1—N3i 92.26 (8) C10—N8—Co1 161.5 (2)
N8—Co1—N3i 87.48 (8) N2—C1—N1 111.0 (2)
N8i—Co1—N3 87.48 (8) N2—C1—H1 124.5
N8—Co1—N3 92.26 (8) N1—C1—H1 124.5
N3i—Co1—N3 179.60 (11) N3—C2—N1 109.7 (2)
N8i—Co1—O1 171.22 (7) N3—C2—H2 125.2
N8—Co1—O1 86.66 (7) N1—C2—H2 125.2
N3i—Co1—O1 93.20 (7) N4—C3—C7 125.2 (2)
N3—Co1—O1 87.09 (7) N4—C3—N1 113.4 (2)
N8i—Co1—O1i 86.66 (7) C7—C3—N1 121.4 (2)
N8—Co1—O1i 171.22 (7) N4—C4—C5 125.0 (2)
N3i—Co1—O1i 87.09 (7) N4—C4—N5 114.1 (2)
N3—Co1—O1i 93.20 (7) C5—C4—N5 120.9 (2)
O1—Co1—O1i 86.76 (9) C4—C5—C6 117.0 (2)
Co1—O1—H1A 108.8 C4—C5—H5 121.5
Co1—O1—H1B 113.3 C6—C5—H5 121.5
H1A—O1—H1B 106.9 C7—C6—C5 120.2 (2)
C2—N1—C1 104.6 (2) C7—C6—H6 119.9
C2—N1—C3 126.1 (2) C5—C6—H6 119.9
C1—N1—C3 129.3 (2) C6—C7—C3 116.7 (2)
C1—N2—N3 106.3 (2) C6—C7—H7 121.6
C2—N3—N2 108.43 (19) C3—C7—H7 121.6
C2—N3—Co1 129.19 (17) N6—C8—N5 110.3 (2)
N2—N3—Co1 121.72 (15) N6—C8—H8 124.8
C4—N4—C3 115.8 (2) N5—C8—H8 124.8
C9—N5—C8 104.8 (2) N7—C9—N5 110.6 (2)
C9—N5—C4 127.9 (2) N7—C9—H9 124.7
C8—N5—C4 127.2 (2) N5—C9—H9 124.7
C8—N6—N7 107.2 (2) N8—C10—Se1 179.1 (2)
C1—N2—N3—C2 −0.3 (3) C4—N4—C3—C7 −1.3 (3)
C1—N2—N3—Co1 171.20 (16) C4—N4—C3—N1 178.59 (19)
N8i—Co1—N3—C2 12.0 (2) C2—N1—C3—N4 2.0 (3)
N8—Co1—N3—C2 112.4 (2) C1—N1—C3—N4 −179.1 (2)
N3i—Co1—N3—C2 62.2 (3) C2—N1—C3—C7 −178.1 (2)
O1—Co1—N3—C2 −161.1 (2) C1—N1—C3—C7 0.8 (4)
O1i—Co1—N3—C2 −74.5 (2) C3—N4—C4—C5 0.3 (3)
N8i—Co1—N3—N2 −157.53 (17) C3—N4—C4—N5 −179.81 (19)
N8—Co1—N3—N2 −57.18 (17) C9—N5—C4—N4 166.4 (2)
N3i—Co1—N3—N2 −107.3 (3) C8—N5—C4—N4 −9.4 (3)
O1—Co1—N3—N2 29.36 (17) C9—N5—C4—C5 −13.7 (4)
O1i—Co1—N3—N2 115.95 (17) C8—N5—C4—C5 170.5 (2)
C8—N6—N7—C9 0.3 (3) N4—C4—C5—C6 0.3 (4)
N8i—Co1—N8—C10 −156.3 (7) N5—C4—C5—C6 −179.6 (2)
N3i—Co1—N8—C10 −64.4 (6) C4—C5—C6—C7 0.1 (4)
N3—Co1—N8—C10 115.9 (6) C5—C6—C7—C3 −0.9 (3)
O1—Co1—N8—C10 28.9 (6) N4—C3—C7—C6 1.6 (4)
O1i—Co1—N8—C10 −12.6 (10) N1—C3—C7—C6 −178.2 (2)
N3—N2—C1—N1 0.2 (3) N7—N6—C8—N5 −0.3 (3)
C2—N1—C1—N2 0.0 (3) C9—N5—C8—N6 0.3 (3)
C3—N1—C1—N2 −179.1 (2) C4—N5—C8—N6 176.8 (2)
N2—N3—C2—N1 0.3 (3) N6—N7—C9—N5 −0.1 (3)
Co1—N3—C2—N1 −170.33 (15) C8—N5—C9—N7 −0.1 (3)
C1—N1—C2—N3 −0.2 (3) C4—N5—C9—N7 −176.6 (2)
C3—N1—C2—N3 178.9 (2) Co1—N8—C10—Se1 −132 (15)

Symmetry code: (i) −x+2, y, −z+1/2.

Hydrogen-bond geometry (Å, º)

D—H···A D—H H···A D···A D—H···A
O1—H1A···N2 0.84 2.43 3.017 (3) 127
O1—H1B···N7ii 0.84 2.00 2.837 (3) 173
C1—H1···N6iii 0.95 2.37 3.293 (3) 163
C5—H5···N8iv 0.95 2.56 3.356 (3) 142
C7—H7···N6iii 0.95 2.46 3.373 (3) 162
C9—H9···Se1iv 0.95 2.96 3.877 (3) 164

Symmetry codes: (ii) x+1/2, −y+3/2, z+1/2; (iii) x+1/2, y+1/2, z; (iv) −x+2, −y+1, −z.

Footnotes

Supplementary data and figures for this paper are available from the IUCr electronic archives (Reference: ZJ2088).

References

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Associated Data

This section collects any data citations, data availability statements, or supplementary materials included in this article.

Supplementary Materials

Crystal structure: contains datablock(s) global, I. DOI: 10.1107/S1600536812032461/zj2088sup1.cif

e-68-m1097-sup1.cif (18.8KB, cif)

Structure factors: contains datablock(s) I. DOI: 10.1107/S1600536812032461/zj2088Isup2.hkl

e-68-m1097-Isup2.hkl (112.2KB, hkl)

Additional supplementary materials: crystallographic information; 3D view; checkCIF report


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