Abstract
The title compound, [Mn(C6H4N5O)2(H2O)4], is isotypic with its Zn, Ni and Cd analogues reported recently. In the crystal, the MnII cations are coordinated by four O atoms from four aqua ligands and two N atoms from two 5-(pyridin-4-yl)tetrazolide N5-oxide ligands in a distorted octahedral coordination environment. The asymmetric unit consists of one MnII cation located on a crystallographic twofold axis, and two crystallographically independent water molecules and one N-donor ligand in general positions. The discrete complex molecules are arranged in alternating rows parallel to [100] and are linked by O—H⋯N and O—H⋯O hydrogen bonds into a three-dimensional network.
Related literature
For related structures, see: Yang et al. (2009 ▶); Yu et al. (2004a
▶,b
▶). For the coordination properties of tetrazolate ligands, see: Aromí et al. (2011 ▶).
Experimental
Crystal data
[Mn(C6H4N5O)2(H2O)4]
M r = 451.29
Monoclinic,
a = 21.828 (2) Å
b = 7.0620 (9) Å
c = 11.3229 (13) Å
β = 96.515 (10)°
V = 1734.1 (3) Å3
Z = 4
Mo Kα radiation
μ = 0.82 mm−1
T = 293 K
0.32 × 0.25 × 0.20 mm
Data collection
Bruker APEX area-dectector diffractometer
Absorption correction: multi-scan (SADABS; Sheldrick, 1996 ▶) T min = 0.782, T max = 0.849
5196 measured reflections
1530 independent reflections
1149 reflections with I > 2σ(I)
R int = 0.049
Refinement
R[F 2 > 2σ(F 2)] = 0.037
wR(F 2) = 0.080
S = 1.05
1530 reflections
145 parameters
H atoms treated by a mixture of independent and constrained refinement
Δρmax = 0.21 e Å−3
Δρmin = −0.25 e Å−3
Data collection: APEX2 (Bruker, 2004 ▶); cell refinement: SAINT (Bruker, 2004 ▶); data reduction: SAINT; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: SHELXTL (Sheldrick, 2008 ▶); software used to prepare material for publication: SHELXL97.
Supplementary Material
Crystal structure: contains datablock(s) I, global. DOI: 10.1107/S1600536812032618/nc2281sup1.cif
Structure factors: contains datablock(s) I. DOI: 10.1107/S1600536812032618/nc2281Isup2.hkl
Supplementary material file. DOI: 10.1107/S1600536812032618/nc2281Isup3.cdx
Additional supplementary materials: crystallographic information; 3D view; checkCIF report
Table 1. Hydrogen-bond geometry (Å, °).
| D—H⋯A | D—H | H⋯A | D⋯A | D—H⋯A |
|---|---|---|---|---|
| O2—H9⋯O3i | 0.87 (3) | 1.80 (3) | 2.658 (3) | 170 (3) |
| O1—H11⋯O3ii | 0.80 (3) | 1.98 (3) | 2.770 (3) | 173 (3) |
| O2—H10⋯O3iii | 0.87 (3) | 1.88 (3) | 2.751 (3) | 172 (3) |
| O1—H12⋯N3iv | 0.81 (3) | 2.05 (3) | 2.861 (3) | 171 (3) |
Symmetry codes: (i)
; (ii)
; (iii)
; (iv)
.
Acknowledgments
The authors thank the Research Office of Yangtze University for supporting this work.
supplementary crystallographic information
Comment
Ligands based on tetrazolates have attracted wide attention because of their versatile coordination modes and therefore, a large number of metal complexes containing these types of ligands are reported in literature (Aromí et al., 2011). Several of them have been prepared via in situ synthesis of nitriles and azides. In view of this we have reacted 4-cyanopyridine 1-oxide with manganese chloride and sodium azide, which results in the formation of crystals of the title compound that is isotypic to its Zn, Ni and Cd analogs (Yu et al., 2004a,b; Yang et al., 2009).
The coordination geometry of the Mn atom is a slightly distorted octahedron formed by the coordination of four water molecules and two tetrazolate ligands (Fig. 1). The oxygen atoms from the four water molecules form a square planar arrangement around the Mn center and the tetrazolate ligands coordinate via the N atom to the Mn cations. The discrete complex molecules are arranged in alternating rows parallel to [100] and are linked by O—H···N and O—H···O hydrogen bonds into a three-dimensional network. (Fig. 2 and Table 1)
Experimental
The mixture of 4-cyanopyridine 1-oxide (0.42 mmol, 50.3 mg), MnCl2.6H2O (0.50 mmol, 116.5 mg) and NaN3 (0.70 mmol, 45.6 mg) in 15 ml EtOH and H2O (v/v = 2:1) were heated in a 25 ml bomb at 393 K for 3 d, then cooled to room temperature at a rate of 6 K h-1. Colorless block-shaped crystals suitable for X-ray analysis were obtained in a yield of 40% based on the ligand 4-cyanopyridine 1-oxide. The product was washed with EtOH and H2O, and then air-dried at ambient temperature. Elemental analysis for C12H16N10O6Mn found: C 31.75, H 3.52, N 30.97; calculated: C 31.94, H 3.57, N 31.04. Selected IR (KBr, cm-1): 3118 (w), 3058(w), 1532 (m), 1462 (m), 1439 (m), 1215 (s), 1193 (s), 856 (s).
Refinement
Hydrogen atoms were placed in calculated positions (C—H 0.93 Å; U = 1.2UeqC), and were included in the refinement in the riding model approximation. The hydrogen atoms of aqua ligands were located and refined.
Figures
Fig. 1.
ORTEP drawing of the title compound with labeling. Displacement ellipsoids are drawn at 30% probability level and H atoms are drawn as spheres of arbitrary radius. [Symmetry code: -x + 1, y, -z + 1/2]
Fig. 2.
The packing diagram of the title compound with intermolecular H bonding along ac plane shown as dashed lines.
Crystal data
| [Mn(C6H4N5O)2(H2O)4] | F(000) = 924 |
| Mr = 451.29 | Dx = 1.729 Mg m−3 |
| Monoclinic, C2/c | Mo Kα radiation, λ = 0.71073 Å |
| Hall symbol: -C 2yc | Cell parameters from 65 reflections |
| a = 21.828 (2) Å | θ = 2.2–26.0° |
| b = 7.0620 (9) Å | µ = 0.82 mm−1 |
| c = 11.3229 (13) Å | T = 293 K |
| β = 96.515 (10)° | Block, colourless |
| V = 1734.1 (3) Å3 | 0.32 × 0.25 × 0.20 mm |
| Z = 4 |
Data collection
| Bruker APEX area-dectector diffractometer | 1530 independent reflections |
| Radiation source: fine-focus sealed tube | 1149 reflections with I > 2σ(I) |
| Graphite monochromator | Rint = 0.049 |
| φ and ω scans | θmax = 25.0°, θmin = 3.0° |
| Absorption correction: multi-scan (SADABS; Sheldrick, 1996) | h = −24→25 |
| Tmin = 0.782, Tmax = 0.849 | k = −8→7 |
| 5196 measured reflections | l = −13→13 |
Refinement
| Refinement on F2 | Primary atom site location: structure-invariant direct methods |
| Least-squares matrix: full | Secondary atom site location: difference Fourier map |
| R[F2 > 2σ(F2)] = 0.037 | Hydrogen site location: inferred from neighbouring sites |
| wR(F2) = 0.080 | H atoms treated by a mixture of independent and constrained refinement |
| S = 1.05 | w = 1/[σ2(Fo2) + (0.0291P)2] where P = (Fo2 + 2Fc2)/3 |
| 1530 reflections | (Δ/σ)max < 0.001 |
| 145 parameters | Δρmax = 0.21 e Å−3 |
| 0 restraints | Δρmin = −0.25 e Å−3 |
Special details
| Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
| Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R-factors based on ALL data will be even larger. |
Fractional atomic coordinates and isotropic or equivalent isotropic displacement parameters (Å2)
| x | y | z | Uiso*/Ueq | ||
| Mn1 | 0.5000 | 0.16002 (8) | 0.2500 | 0.0261 (2) | |
| N1 | 0.35497 (9) | 0.1653 (3) | 0.2280 (2) | 0.0300 (6) | |
| N2 | 0.40483 (10) | 0.1527 (3) | 0.3078 (2) | 0.0296 (5) | |
| N3 | 0.38821 (10) | 0.1262 (3) | 0.4150 (2) | 0.0328 (6) | |
| N4 | 0.32672 (10) | 0.1218 (3) | 0.4086 (2) | 0.0320 (6) | |
| O1 | 0.47398 (9) | −0.0641 (3) | 0.12179 (19) | 0.0344 (5) | |
| O2 | 0.52626 (10) | 0.3978 (3) | 0.3678 (2) | 0.0380 (6) | |
| O3 | 0.06246 (8) | 0.1620 (3) | 0.09684 (18) | 0.0383 (5) | |
| C1 | 0.30785 (11) | 0.1464 (4) | 0.2926 (2) | 0.0236 (6) | |
| C2 | 0.24297 (11) | 0.1479 (3) | 0.2420 (2) | 0.0229 (6) | |
| C3 | 0.19542 (12) | 0.1790 (3) | 0.3111 (3) | 0.0296 (6) | |
| H3 | 0.2044 | 0.1985 | 0.3924 | 0.036* | |
| C4 | 0.13523 (12) | 0.1815 (4) | 0.2608 (3) | 0.0311 (7) | |
| H4 | 0.1037 | 0.2006 | 0.3084 | 0.037* | |
| N5 | 0.12168 (9) | 0.1565 (3) | 0.1437 (2) | 0.0282 (5) | |
| C6 | 0.16617 (12) | 0.1269 (4) | 0.0737 (3) | 0.0327 (7) | |
| H6 | 0.1558 | 0.1112 | −0.0077 | 0.039* | |
| C7 | 0.22684 (12) | 0.1197 (4) | 0.1205 (3) | 0.0304 (7) | |
| H7 | 0.2573 | 0.0959 | 0.0713 | 0.036* | |
| H9 | 0.5404 (16) | 0.367 (4) | 0.440 (3) | 0.058 (5)* | |
| H11 | 0.5008 (16) | −0.137 (4) | 0.111 (3) | 0.058 (5)* | |
| H10 | 0.4956 (15) | 0.475 (4) | 0.376 (3) | 0.058 (5)* | |
| H12 | 0.4499 (16) | −0.069 (4) | 0.061 (3) | 0.058 (5)* |
Atomic displacement parameters (Å2)
| U11 | U22 | U33 | U12 | U13 | U23 | |
| Mn1 | 0.0187 (3) | 0.0362 (4) | 0.0234 (4) | 0.000 | 0.0021 (2) | 0.000 |
| N1 | 0.0206 (13) | 0.0446 (14) | 0.0245 (13) | −0.0004 (10) | 0.0011 (10) | 0.0032 (12) |
| N2 | 0.0205 (12) | 0.0402 (13) | 0.0275 (14) | 0.0003 (10) | 0.0003 (10) | 0.0011 (12) |
| N3 | 0.0210 (13) | 0.0499 (15) | 0.0274 (14) | 0.0011 (10) | 0.0023 (11) | 0.0025 (12) |
| N4 | 0.0210 (13) | 0.0494 (15) | 0.0258 (14) | 0.0031 (10) | 0.0038 (10) | 0.0009 (12) |
| O1 | 0.0257 (13) | 0.0483 (13) | 0.0278 (12) | 0.0033 (9) | −0.0032 (9) | −0.0070 (11) |
| O2 | 0.0309 (13) | 0.0486 (14) | 0.0334 (13) | 0.0065 (9) | −0.0014 (10) | −0.0086 (11) |
| O3 | 0.0202 (10) | 0.0496 (12) | 0.0429 (13) | −0.0007 (9) | −0.0065 (9) | −0.0007 (11) |
| C1 | 0.0189 (14) | 0.0254 (14) | 0.0267 (16) | −0.0009 (11) | 0.0033 (12) | −0.0010 (13) |
| C2 | 0.0205 (14) | 0.0222 (14) | 0.0257 (15) | −0.0017 (11) | 0.0011 (12) | 0.0036 (14) |
| C3 | 0.0236 (15) | 0.0409 (16) | 0.0245 (15) | −0.0020 (12) | 0.0033 (12) | −0.0017 (14) |
| C4 | 0.0232 (15) | 0.0427 (18) | 0.0286 (16) | 0.0007 (12) | 0.0086 (12) | −0.0010 (15) |
| N5 | 0.0188 (12) | 0.0314 (12) | 0.0339 (14) | −0.0004 (10) | 0.0011 (10) | 0.0002 (12) |
| C6 | 0.0275 (16) | 0.0464 (18) | 0.0235 (16) | 0.0020 (13) | −0.0005 (13) | −0.0061 (14) |
| C7 | 0.0229 (15) | 0.0418 (17) | 0.0268 (16) | 0.0040 (12) | 0.0045 (13) | −0.0013 (14) |
Geometric parameters (Å, º)
| Mn1—O1 | 2.179 (2) | O2—H10 | 0.87 (3) |
| Mn1—O1i | 2.179 (2) | O3—N5 | 1.341 (3) |
| Mn1—O2 | 2.180 (2) | C1—C2 | 1.467 (3) |
| Mn1—O2i | 2.180 (2) | C2—C3 | 1.387 (4) |
| Mn1—N2i | 2.248 (2) | C2—C7 | 1.394 (4) |
| Mn1—N2 | 2.248 (2) | C3—C4 | 1.371 (4) |
| N1—C1 | 1.335 (3) | C3—H3 | 0.9300 |
| N1—N2 | 1.336 (3) | C4—N5 | 1.338 (3) |
| N2—N3 | 1.319 (3) | C4—H4 | 0.9300 |
| N3—N4 | 1.336 (3) | N5—C6 | 1.338 (4) |
| N4—C1 | 1.342 (3) | C6—C7 | 1.371 (3) |
| O1—H11 | 0.80 (3) | C6—H6 | 0.9300 |
| O1—H12 | 0.81 (3) | C7—H7 | 0.9300 |
| O2—H9 | 0.87 (3) | ||
| O1—Mn1—O1i | 86.82 (11) | Mn1—O2—H9 | 115 (2) |
| O1—Mn1—O2 | 175.99 (9) | Mn1—O2—H10 | 113 (2) |
| O1i—Mn1—O2 | 96.97 (8) | H9—O2—H10 | 104 (3) |
| O1—Mn1—O2i | 96.97 (8) | N1—C1—N4 | 112.3 (2) |
| O1i—Mn1—O2i | 175.99 (9) | N1—C1—C2 | 123.7 (2) |
| O2—Mn1—O2i | 79.27 (12) | N4—C1—C2 | 124.0 (2) |
| O1—Mn1—N2i | 88.23 (8) | C3—C2—C7 | 117.2 (2) |
| O1i—Mn1—N2i | 89.86 (8) | C3—C2—C1 | 122.1 (2) |
| O2—Mn1—N2i | 90.47 (8) | C7—C2—C1 | 120.6 (2) |
| O2i—Mn1—N2i | 91.55 (8) | C4—C3—C2 | 120.8 (3) |
| O1—Mn1—N2 | 89.86 (8) | C4—C3—H3 | 119.6 |
| O1i—Mn1—N2 | 88.23 (8) | C2—C3—H3 | 119.6 |
| O2—Mn1—N2 | 91.55 (8) | N5—C4—C3 | 120.2 (3) |
| O2i—Mn1—N2 | 90.47 (8) | N5—C4—H4 | 119.9 |
| N2i—Mn1—N2 | 177.37 (12) | C3—C4—H4 | 119.9 |
| C1—N1—N2 | 104.0 (2) | C4—N5—C6 | 121.0 (2) |
| N3—N2—N1 | 110.08 (19) | C4—N5—O3 | 118.9 (2) |
| N3—N2—Mn1 | 129.10 (16) | C6—N5—O3 | 120.1 (2) |
| N1—N2—Mn1 | 120.71 (17) | N5—C6—C7 | 120.7 (3) |
| N2—N3—N4 | 109.4 (2) | N5—C6—H6 | 119.6 |
| N3—N4—C1 | 104.2 (2) | C7—C6—H6 | 119.6 |
| Mn1—O1—H11 | 115 (3) | C6—C7—C2 | 120.1 (3) |
| Mn1—O1—H12 | 133 (2) | C6—C7—H7 | 120.0 |
| H11—O1—H12 | 105 (4) | C2—C7—H7 | 120.0 |
| C1—N1—N2—N3 | 0.4 (3) | N3—N4—C1—N1 | 0.1 (3) |
| C1—N1—N2—Mn1 | 176.92 (17) | N3—N4—C1—C2 | 178.7 (2) |
| O1—Mn1—N2—N3 | 123.9 (2) | N1—C1—C2—C3 | −162.3 (3) |
| O1i—Mn1—N2—N3 | 37.1 (2) | N4—C1—C2—C3 | 19.3 (4) |
| O2—Mn1—N2—N3 | −59.8 (2) | N1—C1—C2—C7 | 17.0 (4) |
| O2i—Mn1—N2—N3 | −139.1 (2) | N4—C1—C2—C7 | −161.5 (3) |
| N2i—Mn1—N2—N3 | 80.5 (2) | C7—C2—C3—C4 | 0.0 (4) |
| O1—Mn1—N2—N1 | −51.82 (19) | C1—C2—C3—C4 | 179.3 (2) |
| O1i—Mn1—N2—N1 | −138.64 (19) | C2—C3—C4—N5 | −1.0 (4) |
| O2—Mn1—N2—N1 | 124.43 (19) | C3—C4—N5—C6 | 0.6 (4) |
| O2i—Mn1—N2—N1 | 45.15 (19) | C3—C4—N5—O3 | −179.1 (2) |
| N2i—Mn1—N2—N1 | −95.22 (18) | C4—N5—C6—C7 | 0.7 (4) |
| N1—N2—N3—N4 | −0.4 (3) | O3—N5—C6—C7 | −179.6 (2) |
| Mn1—N2—N3—N4 | −176.50 (17) | N5—C6—C7—C2 | −1.6 (4) |
| N2—N3—N4—C1 | 0.2 (3) | C3—C2—C7—C6 | 1.2 (4) |
| N2—N1—C1—N4 | −0.3 (3) | C1—C2—C7—C6 | −178.1 (2) |
| N2—N1—C1—C2 | −178.9 (2) |
Symmetry code: (i) −x+1, y, −z+1/2.
Hydrogen-bond geometry (Å, º)
| D—H···A | D—H | H···A | D···A | D—H···A |
| O2—H9···O3ii | 0.87 (3) | 1.80 (3) | 2.658 (3) | 170 (3) |
| O1—H11···O3iii | 0.80 (3) | 1.98 (3) | 2.770 (3) | 173 (3) |
| O2—H10···O3iv | 0.87 (3) | 1.88 (3) | 2.751 (3) | 172 (3) |
| O1—H12···N3v | 0.81 (3) | 2.05 (3) | 2.861 (3) | 171 (3) |
Symmetry codes: (ii) x+1/2, −y+1/2, z+1/2; (iii) x+1/2, y−1/2, z; (iv) −x+1/2, y+1/2, −z+1/2; (v) x, −y, z−1/2.
Footnotes
Supplementary data and figures for this paper are available from the IUCr electronic archives (Reference: NC2281).
References
- Aromí, G. L., Barrios, A., Roubeau, O. & Gamez, P. (2011). Coord. Chem. Rev. 255, 485–546.
- Bruker (2004). APEX2 and SAINT Bruker AXS Inc., Madison, Wisconsin, USA.
- Sheldrick, G. M. (1996). SADABS University of Göttingen, Germany.
- Sheldrick, G. M. (2008). Acta Cryst. A64, 112–122. [DOI] [PubMed]
- Yang, W. B., Lin, X., Blake, A. J., Wilson, C., Hubberstey, P., Champness, N. R. & Schröder, M. (2009). CrystEngComm, 11, 67–81.
- Yu, Z.-X., Wang, X.-P. & Feng, Y. (2004a). Acta Cryst. C60, m194–m196. [DOI] [PubMed]
- Yu, Z. X., Wang, X. P., Feng, Y. Y. & Zhong, X. H. (2004b). Inorg. Chem. Commun. 7, 492–494.
Associated Data
This section collects any data citations, data availability statements, or supplementary materials included in this article.
Supplementary Materials
Crystal structure: contains datablock(s) I, global. DOI: 10.1107/S1600536812032618/nc2281sup1.cif
Structure factors: contains datablock(s) I. DOI: 10.1107/S1600536812032618/nc2281Isup2.hkl
Supplementary material file. DOI: 10.1107/S1600536812032618/nc2281Isup3.cdx
Additional supplementary materials: crystallographic information; 3D view; checkCIF report


