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Acta Crystallographica Section E: Structure Reports Online logoLink to Acta Crystallographica Section E: Structure Reports Online
. 2012 Jul 28;68(Pt 8):m1130. doi: 10.1107/S1600536812032618

Tetra­aqua­bis­[5-(pyridin-4-yl)tetra­zolido N 5-oxide-κN 2]manganese(II)

Xiang Jing a,*, Ya Luo a
PMCID: PMC3414170  PMID: 22904777

Abstract

The title compound, [Mn(C6H4N5O)2(H2O)4], is isotypic with its Zn, Ni and Cd analogues reported recently. In the crystal, the MnII cations are coordinated by four O atoms from four aqua ligands and two N atoms from two 5-(pyridin-4-yl)tetra­zolide N5-oxide ligands in a distorted octa­hedral coordination environment. The asymmetric unit consists of one MnII cation located on a crystallographic twofold axis, and two crystallographically independent water mol­ecules and one N-donor ligand in general positions. The discrete complex mol­ecules are arranged in alternating rows parallel to [100] and are linked by O—H⋯N and O—H⋯O hydrogen bonds into a three-dimensional network.

Related literature  

For related structures, see: Yang et al. (2009); Yu et al. (2004a ,b ). For the coordination properties of tetra­zolate ligands, see: Aromí et al. (2011).graphic file with name e-68-m1130-scheme1.jpg

Experimental  

Crystal data  

  • [Mn(C6H4N5O)2(H2O)4]

  • M r = 451.29

  • Monoclinic, Inline graphic

  • a = 21.828 (2) Å

  • b = 7.0620 (9) Å

  • c = 11.3229 (13) Å

  • β = 96.515 (10)°

  • V = 1734.1 (3) Å3

  • Z = 4

  • Mo Kα radiation

  • μ = 0.82 mm−1

  • T = 293 K

  • 0.32 × 0.25 × 0.20 mm

Data collection  

  • Bruker APEX area-dectector diffractometer

  • Absorption correction: multi-scan (SADABS; Sheldrick, 1996) T min = 0.782, T max = 0.849

  • 5196 measured reflections

  • 1530 independent reflections

  • 1149 reflections with I > 2σ(I)

  • R int = 0.049

Refinement  

  • R[F 2 > 2σ(F 2)] = 0.037

  • wR(F 2) = 0.080

  • S = 1.05

  • 1530 reflections

  • 145 parameters

  • H atoms treated by a mixture of independent and constrained refinement

  • Δρmax = 0.21 e Å−3

  • Δρmin = −0.25 e Å−3

Data collection: APEX2 (Bruker, 2004); cell refinement: SAINT (Bruker, 2004); data reduction: SAINT; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008); molecular graphics: SHELXTL (Sheldrick, 2008); software used to prepare material for publication: SHELXL97.

Supplementary Material

Crystal structure: contains datablock(s) I, global. DOI: 10.1107/S1600536812032618/nc2281sup1.cif

e-68-m1130-sup1.cif (16.2KB, cif)

Structure factors: contains datablock(s) I. DOI: 10.1107/S1600536812032618/nc2281Isup2.hkl

e-68-m1130-Isup2.hkl (75.6KB, hkl)

Supplementary material file. DOI: 10.1107/S1600536812032618/nc2281Isup3.cdx

Additional supplementary materials: crystallographic information; 3D view; checkCIF report

Table 1. Hydrogen-bond geometry (Å, °).

D—H⋯A D—H H⋯A DA D—H⋯A
O2—H9⋯O3i 0.87 (3) 1.80 (3) 2.658 (3) 170 (3)
O1—H11⋯O3ii 0.80 (3) 1.98 (3) 2.770 (3) 173 (3)
O2—H10⋯O3iii 0.87 (3) 1.88 (3) 2.751 (3) 172 (3)
O1—H12⋯N3iv 0.81 (3) 2.05 (3) 2.861 (3) 171 (3)

Symmetry codes: (i) Inline graphic; (ii) Inline graphic; (iii) Inline graphic; (iv) Inline graphic.

Acknowledgments

The authors thank the Research Office of Yangtze University for supporting this work.

supplementary crystallographic information

Comment

Ligands based on tetrazolates have attracted wide attention because of their versatile coordination modes and therefore, a large number of metal complexes containing these types of ligands are reported in literature (Aromí et al., 2011). Several of them have been prepared via in situ synthesis of nitriles and azides. In view of this we have reacted 4-cyanopyridine 1-oxide with manganese chloride and sodium azide, which results in the formation of crystals of the title compound that is isotypic to its Zn, Ni and Cd analogs (Yu et al., 2004a,b; Yang et al., 2009).

The coordination geometry of the Mn atom is a slightly distorted octahedron formed by the coordination of four water molecules and two tetrazolate ligands (Fig. 1). The oxygen atoms from the four water molecules form a square planar arrangement around the Mn center and the tetrazolate ligands coordinate via the N atom to the Mn cations. The discrete complex molecules are arranged in alternating rows parallel to [100] and are linked by O—H···N and O—H···O hydrogen bonds into a three-dimensional network. (Fig. 2 and Table 1)

Experimental

The mixture of 4-cyanopyridine 1-oxide (0.42 mmol, 50.3 mg), MnCl2.6H2O (0.50 mmol, 116.5 mg) and NaN3 (0.70 mmol, 45.6 mg) in 15 ml EtOH and H2O (v/v = 2:1) were heated in a 25 ml bomb at 393 K for 3 d, then cooled to room temperature at a rate of 6 K h-1. Colorless block-shaped crystals suitable for X-ray analysis were obtained in a yield of 40% based on the ligand 4-cyanopyridine 1-oxide. The product was washed with EtOH and H2O, and then air-dried at ambient temperature. Elemental analysis for C12H16N10O6Mn found: C 31.75, H 3.52, N 30.97; calculated: C 31.94, H 3.57, N 31.04. Selected IR (KBr, cm-1): 3118 (w), 3058(w), 1532 (m), 1462 (m), 1439 (m), 1215 (s), 1193 (s), 856 (s).

Refinement

Hydrogen atoms were placed in calculated positions (C—H 0.93 Å; U = 1.2UeqC), and were included in the refinement in the riding model approximation. The hydrogen atoms of aqua ligands were located and refined.

Figures

Fig. 1.

Fig. 1.

ORTEP drawing of the title compound with labeling. Displacement ellipsoids are drawn at 30% probability level and H atoms are drawn as spheres of arbitrary radius. [Symmetry code: -x + 1, y, -z + 1/2]

Fig. 2.

Fig. 2.

The packing diagram of the title compound with intermolecular H bonding along ac plane shown as dashed lines.

Crystal data

[Mn(C6H4N5O)2(H2O)4] F(000) = 924
Mr = 451.29 Dx = 1.729 Mg m3
Monoclinic, C2/c Mo Kα radiation, λ = 0.71073 Å
Hall symbol: -C 2yc Cell parameters from 65 reflections
a = 21.828 (2) Å θ = 2.2–26.0°
b = 7.0620 (9) Å µ = 0.82 mm1
c = 11.3229 (13) Å T = 293 K
β = 96.515 (10)° Block, colourless
V = 1734.1 (3) Å3 0.32 × 0.25 × 0.20 mm
Z = 4

Data collection

Bruker APEX area-dectector diffractometer 1530 independent reflections
Radiation source: fine-focus sealed tube 1149 reflections with I > 2σ(I)
Graphite monochromator Rint = 0.049
φ and ω scans θmax = 25.0°, θmin = 3.0°
Absorption correction: multi-scan (SADABS; Sheldrick, 1996) h = −24→25
Tmin = 0.782, Tmax = 0.849 k = −8→7
5196 measured reflections l = −13→13

Refinement

Refinement on F2 Primary atom site location: structure-invariant direct methods
Least-squares matrix: full Secondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.037 Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.080 H atoms treated by a mixture of independent and constrained refinement
S = 1.05 w = 1/[σ2(Fo2) + (0.0291P)2] where P = (Fo2 + 2Fc2)/3
1530 reflections (Δ/σ)max < 0.001
145 parameters Δρmax = 0.21 e Å3
0 restraints Δρmin = −0.25 e Å3

Special details

Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R-factors based on ALL data will be even larger.

Fractional atomic coordinates and isotropic or equivalent isotropic displacement parameters (Å2)

x y z Uiso*/Ueq
Mn1 0.5000 0.16002 (8) 0.2500 0.0261 (2)
N1 0.35497 (9) 0.1653 (3) 0.2280 (2) 0.0300 (6)
N2 0.40483 (10) 0.1527 (3) 0.3078 (2) 0.0296 (5)
N3 0.38821 (10) 0.1262 (3) 0.4150 (2) 0.0328 (6)
N4 0.32672 (10) 0.1218 (3) 0.4086 (2) 0.0320 (6)
O1 0.47398 (9) −0.0641 (3) 0.12179 (19) 0.0344 (5)
O2 0.52626 (10) 0.3978 (3) 0.3678 (2) 0.0380 (6)
O3 0.06246 (8) 0.1620 (3) 0.09684 (18) 0.0383 (5)
C1 0.30785 (11) 0.1464 (4) 0.2926 (2) 0.0236 (6)
C2 0.24297 (11) 0.1479 (3) 0.2420 (2) 0.0229 (6)
C3 0.19542 (12) 0.1790 (3) 0.3111 (3) 0.0296 (6)
H3 0.2044 0.1985 0.3924 0.036*
C4 0.13523 (12) 0.1815 (4) 0.2608 (3) 0.0311 (7)
H4 0.1037 0.2006 0.3084 0.037*
N5 0.12168 (9) 0.1565 (3) 0.1437 (2) 0.0282 (5)
C6 0.16617 (12) 0.1269 (4) 0.0737 (3) 0.0327 (7)
H6 0.1558 0.1112 −0.0077 0.039*
C7 0.22684 (12) 0.1197 (4) 0.1205 (3) 0.0304 (7)
H7 0.2573 0.0959 0.0713 0.036*
H9 0.5404 (16) 0.367 (4) 0.440 (3) 0.058 (5)*
H11 0.5008 (16) −0.137 (4) 0.111 (3) 0.058 (5)*
H10 0.4956 (15) 0.475 (4) 0.376 (3) 0.058 (5)*
H12 0.4499 (16) −0.069 (4) 0.061 (3) 0.058 (5)*

Atomic displacement parameters (Å2)

U11 U22 U33 U12 U13 U23
Mn1 0.0187 (3) 0.0362 (4) 0.0234 (4) 0.000 0.0021 (2) 0.000
N1 0.0206 (13) 0.0446 (14) 0.0245 (13) −0.0004 (10) 0.0011 (10) 0.0032 (12)
N2 0.0205 (12) 0.0402 (13) 0.0275 (14) 0.0003 (10) 0.0003 (10) 0.0011 (12)
N3 0.0210 (13) 0.0499 (15) 0.0274 (14) 0.0011 (10) 0.0023 (11) 0.0025 (12)
N4 0.0210 (13) 0.0494 (15) 0.0258 (14) 0.0031 (10) 0.0038 (10) 0.0009 (12)
O1 0.0257 (13) 0.0483 (13) 0.0278 (12) 0.0033 (9) −0.0032 (9) −0.0070 (11)
O2 0.0309 (13) 0.0486 (14) 0.0334 (13) 0.0065 (9) −0.0014 (10) −0.0086 (11)
O3 0.0202 (10) 0.0496 (12) 0.0429 (13) −0.0007 (9) −0.0065 (9) −0.0007 (11)
C1 0.0189 (14) 0.0254 (14) 0.0267 (16) −0.0009 (11) 0.0033 (12) −0.0010 (13)
C2 0.0205 (14) 0.0222 (14) 0.0257 (15) −0.0017 (11) 0.0011 (12) 0.0036 (14)
C3 0.0236 (15) 0.0409 (16) 0.0245 (15) −0.0020 (12) 0.0033 (12) −0.0017 (14)
C4 0.0232 (15) 0.0427 (18) 0.0286 (16) 0.0007 (12) 0.0086 (12) −0.0010 (15)
N5 0.0188 (12) 0.0314 (12) 0.0339 (14) −0.0004 (10) 0.0011 (10) 0.0002 (12)
C6 0.0275 (16) 0.0464 (18) 0.0235 (16) 0.0020 (13) −0.0005 (13) −0.0061 (14)
C7 0.0229 (15) 0.0418 (17) 0.0268 (16) 0.0040 (12) 0.0045 (13) −0.0013 (14)

Geometric parameters (Å, º)

Mn1—O1 2.179 (2) O2—H10 0.87 (3)
Mn1—O1i 2.179 (2) O3—N5 1.341 (3)
Mn1—O2 2.180 (2) C1—C2 1.467 (3)
Mn1—O2i 2.180 (2) C2—C3 1.387 (4)
Mn1—N2i 2.248 (2) C2—C7 1.394 (4)
Mn1—N2 2.248 (2) C3—C4 1.371 (4)
N1—C1 1.335 (3) C3—H3 0.9300
N1—N2 1.336 (3) C4—N5 1.338 (3)
N2—N3 1.319 (3) C4—H4 0.9300
N3—N4 1.336 (3) N5—C6 1.338 (4)
N4—C1 1.342 (3) C6—C7 1.371 (3)
O1—H11 0.80 (3) C6—H6 0.9300
O1—H12 0.81 (3) C7—H7 0.9300
O2—H9 0.87 (3)
O1—Mn1—O1i 86.82 (11) Mn1—O2—H9 115 (2)
O1—Mn1—O2 175.99 (9) Mn1—O2—H10 113 (2)
O1i—Mn1—O2 96.97 (8) H9—O2—H10 104 (3)
O1—Mn1—O2i 96.97 (8) N1—C1—N4 112.3 (2)
O1i—Mn1—O2i 175.99 (9) N1—C1—C2 123.7 (2)
O2—Mn1—O2i 79.27 (12) N4—C1—C2 124.0 (2)
O1—Mn1—N2i 88.23 (8) C3—C2—C7 117.2 (2)
O1i—Mn1—N2i 89.86 (8) C3—C2—C1 122.1 (2)
O2—Mn1—N2i 90.47 (8) C7—C2—C1 120.6 (2)
O2i—Mn1—N2i 91.55 (8) C4—C3—C2 120.8 (3)
O1—Mn1—N2 89.86 (8) C4—C3—H3 119.6
O1i—Mn1—N2 88.23 (8) C2—C3—H3 119.6
O2—Mn1—N2 91.55 (8) N5—C4—C3 120.2 (3)
O2i—Mn1—N2 90.47 (8) N5—C4—H4 119.9
N2i—Mn1—N2 177.37 (12) C3—C4—H4 119.9
C1—N1—N2 104.0 (2) C4—N5—C6 121.0 (2)
N3—N2—N1 110.08 (19) C4—N5—O3 118.9 (2)
N3—N2—Mn1 129.10 (16) C6—N5—O3 120.1 (2)
N1—N2—Mn1 120.71 (17) N5—C6—C7 120.7 (3)
N2—N3—N4 109.4 (2) N5—C6—H6 119.6
N3—N4—C1 104.2 (2) C7—C6—H6 119.6
Mn1—O1—H11 115 (3) C6—C7—C2 120.1 (3)
Mn1—O1—H12 133 (2) C6—C7—H7 120.0
H11—O1—H12 105 (4) C2—C7—H7 120.0
C1—N1—N2—N3 0.4 (3) N3—N4—C1—N1 0.1 (3)
C1—N1—N2—Mn1 176.92 (17) N3—N4—C1—C2 178.7 (2)
O1—Mn1—N2—N3 123.9 (2) N1—C1—C2—C3 −162.3 (3)
O1i—Mn1—N2—N3 37.1 (2) N4—C1—C2—C3 19.3 (4)
O2—Mn1—N2—N3 −59.8 (2) N1—C1—C2—C7 17.0 (4)
O2i—Mn1—N2—N3 −139.1 (2) N4—C1—C2—C7 −161.5 (3)
N2i—Mn1—N2—N3 80.5 (2) C7—C2—C3—C4 0.0 (4)
O1—Mn1—N2—N1 −51.82 (19) C1—C2—C3—C4 179.3 (2)
O1i—Mn1—N2—N1 −138.64 (19) C2—C3—C4—N5 −1.0 (4)
O2—Mn1—N2—N1 124.43 (19) C3—C4—N5—C6 0.6 (4)
O2i—Mn1—N2—N1 45.15 (19) C3—C4—N5—O3 −179.1 (2)
N2i—Mn1—N2—N1 −95.22 (18) C4—N5—C6—C7 0.7 (4)
N1—N2—N3—N4 −0.4 (3) O3—N5—C6—C7 −179.6 (2)
Mn1—N2—N3—N4 −176.50 (17) N5—C6—C7—C2 −1.6 (4)
N2—N3—N4—C1 0.2 (3) C3—C2—C7—C6 1.2 (4)
N2—N1—C1—N4 −0.3 (3) C1—C2—C7—C6 −178.1 (2)
N2—N1—C1—C2 −178.9 (2)

Symmetry code: (i) −x+1, y, −z+1/2.

Hydrogen-bond geometry (Å, º)

D—H···A D—H H···A D···A D—H···A
O2—H9···O3ii 0.87 (3) 1.80 (3) 2.658 (3) 170 (3)
O1—H11···O3iii 0.80 (3) 1.98 (3) 2.770 (3) 173 (3)
O2—H10···O3iv 0.87 (3) 1.88 (3) 2.751 (3) 172 (3)
O1—H12···N3v 0.81 (3) 2.05 (3) 2.861 (3) 171 (3)

Symmetry codes: (ii) x+1/2, −y+1/2, z+1/2; (iii) x+1/2, y−1/2, z; (iv) −x+1/2, y+1/2, −z+1/2; (v) x, −y, z−1/2.

Footnotes

Supplementary data and figures for this paper are available from the IUCr electronic archives (Reference: NC2281).

References

  1. Aromí, G. L., Barrios, A., Roubeau, O. & Gamez, P. (2011). Coord. Chem. Rev. 255, 485–546.
  2. Bruker (2004). APEX2 and SAINT Bruker AXS Inc., Madison, Wisconsin, USA.
  3. Sheldrick, G. M. (1996). SADABS University of Göttingen, Germany.
  4. Sheldrick, G. M. (2008). Acta Cryst. A64, 112–122. [DOI] [PubMed]
  5. Yang, W. B., Lin, X., Blake, A. J., Wilson, C., Hubberstey, P., Champness, N. R. & Schröder, M. (2009). CrystEngComm, 11, 67–81.
  6. Yu, Z.-X., Wang, X.-P. & Feng, Y. (2004a). Acta Cryst. C60, m194–m196. [DOI] [PubMed]
  7. Yu, Z. X., Wang, X. P., Feng, Y. Y. & Zhong, X. H. (2004b). Inorg. Chem. Commun. 7, 492–494.

Associated Data

This section collects any data citations, data availability statements, or supplementary materials included in this article.

Supplementary Materials

Crystal structure: contains datablock(s) I, global. DOI: 10.1107/S1600536812032618/nc2281sup1.cif

e-68-m1130-sup1.cif (16.2KB, cif)

Structure factors: contains datablock(s) I. DOI: 10.1107/S1600536812032618/nc2281Isup2.hkl

e-68-m1130-Isup2.hkl (75.6KB, hkl)

Supplementary material file. DOI: 10.1107/S1600536812032618/nc2281Isup3.cdx

Additional supplementary materials: crystallographic information; 3D view; checkCIF report


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