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Acta Crystallographica Section E: Structure Reports Online logoLink to Acta Crystallographica Section E: Structure Reports Online
. 2012 Jul 18;68(Pt 8):o2465. doi: 10.1107/S1600536812031637

2,4-Bis[(prop-2-yn­yl)­oxy]benzaldehyde

M Esakkiammal a, V Selvarani a, M A Neelakantan a,*, V Silambarasan b, D Velmurugan b
PMCID: PMC3414921  PMID: 22904908

Abstract

In the title compound, C13H10O3, two prop-2-yn­yloxy groups are attached to the benzaldehyde ring at positions 2 and 6. The crystal packing features C—H⋯O inter­actions.

Related literature  

For the biological activity of benzaldehyde derivatives, see: Zhao et al. (2007). For related literature, see: Delogu et al. (2010); Ley & Bertram (2001). For hydrogen-bond motifs, see: Bernstein et al. (1995).graphic file with name e-68-o2465-scheme1.jpg

Experimental  

Crystal data  

  • C13H10O3

  • M r = 214.21

  • Monoclinic, Inline graphic

  • a = 4.9219 (2) Å

  • b = 16.8705 (7) Å

  • c = 13.4326 (6) Å

  • β = 98.236 (3)°

  • V = 1103.87 (8) Å3

  • Z = 4

  • Mo Kα radiation

  • μ = 0.09 mm−1

  • T = 293 K

  • 0.20 × 0.20 × 0.20 mm

Data collection  

  • Bruker SMART APEXII area-detector diffractometer

  • Absorption correction: multi-scan (SADABS; Bruker, 2008) T min = 0.982, T max = 0.982

  • 10446 measured reflections

  • 2754 independent reflections

  • 2177 reflections with I > 2σ(I)

  • R int = 0.025

Refinement  

  • R[F 2 > 2σ(F 2)] = 0.039

  • wR(F 2) = 0.113

  • S = 1.04

  • 2754 reflections

  • 154 parameters

  • H atoms treated by a mixture of independent and constrained refinement

  • Δρmax = 0.25 e Å−3

  • Δρmin = −0.16 e Å−3

Data collection: APEX2 (Bruker, 2008); cell refinement: APEX2; data reduction: SAINT (Bruker, 2008); program(s) used to solve structure: SHELXS97 (Sheldrick, 2008); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008); molecular graphics: ORTEP-3 (Farrugia, 1997); software used to prepare material for publication: SHELXL97 and PLATON (Spek, 2009).

Supplementary Material

Crystal structure: contains datablock(s) global, I. DOI: 10.1107/S1600536812031637/bt5961sup1.cif

e-68-o2465-sup1.cif (15.7KB, cif)

Structure factors: contains datablock(s) I. DOI: 10.1107/S1600536812031637/bt5961Isup2.hkl

e-68-o2465-Isup2.hkl (132.5KB, hkl)

Supplementary material file. DOI: 10.1107/S1600536812031637/bt5961Isup3.cml

Additional supplementary materials: crystallographic information; 3D view; checkCIF report

Table 1. Hydrogen-bond geometry (Å, °).

D—H⋯A D—H H⋯A DA D—H⋯A
C6—H6⋯O1i 0.93 2.48 3.3616 (14) 159

Symmetry code: (i) Inline graphic.

Acknowledgments

The authors thank TBI Consultancy, University of Madras, India, for the data collection.

supplementary crystallographic information

Comment

The Schiff base derived from amines and substitued benzaldehydes exhibit antibacterial, anticancer and antitumour activities (Zhao et al. (2007)). Several benzaldoximes, benzaldehyde-O-ethyloximes, and acetophenonoximes were synthesized and evaluated as tyrosinase inhibitors (Ley & Bertram (2001)). The bis-salicylaldehydes exhibited greater inhibitory activity than salicylaldehyde (Delogu et al.(2010)).

The ORTEP plot of the molecule is shown in Fig. 1. The dihedral angles of phenyl ring (C2—C7) attached to prop-2-yn-1-yloxy group at 2, 6-positions (O2/C8/C9/C10) & (O3/C11/C12/C13) are 82.3 (1)° & 71.4 (1)°, respectively. The prop-2-yn-1-yloxy group is in an extended conformation which can be seen from torsion angles O2/C8/C9/C10= -177.0 (10)° and O3/C11/C12/C13= 166 (6)°, respectively.

The crystal packing includes an inter-molecular interaction between a terminal ethynyl H atom and an ethynyl group on a glide-related molecule and another interaction between an O-atom-linked methylene H and an ethynyl group of a different glide-related molecule.

The packing of the molecules viewed down a axis is shown in Fig. 2. The molecules are stabilized by C—H···π and bifurcated C—H···O types of intra and intermolecular interactions, which form a dimer C8 chain running along the a axis (Bernstein et al., 1995).

Experimental

2,4-dihydroxybenzaldehyde (10 mmol), 3-bromopropyne (20 mmol) and potassium carbonate (15 mmol) were suspended in acetonitrile (40 ml) and refluxed for 30 h in presence of KI (0.1 g) as catalyst. The reaction mixture was filtered while hot to remove insoluble impurities, neutralized with dil.HCl (3 N) and extracted with chloroform and dried with Na2SO4. The extracts were concentrated to obtain a brown solid which was then purified by column chromatography over SiO2 by eluting a mixture of 4% ethyl acetate with n-hexane. Evaporation of the purified extract yielded 2, 4-dipropynoxybenzaldehyde in the form of pure white solid. Yield: 85%. Crystals suitable for X-ray analysis were obtained by slow evaporation method.

Refinement

H atoms were positioned geometrically (C–H = 0.93–0.97 Å) and allowed to ride on their parent atoms, with Uiso(H) = 1.2Ueq(C).

Figures

Fig. 1.

Fig. 1.

The molecular structure of the title compound, showing the atomic numbering and displacement ellipsoids drawn at 30% probability level.

Fig. 2.

Fig. 2.

The crystal packing of the molecules viewed down a axis.

Crystal data

C13H10O3 F(000) = 448
Mr = 214.21 Dx = 1.289 Mg m3
Monoclinic, P21/n Mo Kα radiation, λ = 0.71073 Å
Hall symbol: -P 2yn Cell parameters from 2754 reflections
a = 4.9219 (2) Å θ = 2.0–28.4°
b = 16.8705 (7) Å µ = 0.09 mm1
c = 13.4326 (6) Å T = 293 K
β = 98.236 (3)° Block, colourless
V = 1103.87 (8) Å3 0.20 × 0.20 × 0.20 mm
Z = 4

Data collection

Bruker SMART APEXII area-detector diffractometer 2754 independent reflections
Radiation source: fine-focus sealed tube 2177 reflections with I > 2σ(I)
Graphite monochromator Rint = 0.025
ω and φ scans θmax = 28.4°, θmin = 2.0°
Absorption correction: multi-scan (SADABS; Bruker, 2008) h = −6→6
Tmin = 0.982, Tmax = 0.982 k = −22→22
10446 measured reflections l = −16→17

Refinement

Refinement on F2 Secondary atom site location: difference Fourier map
Least-squares matrix: full Hydrogen site location: inferred from neighbouring sites
R[F2 > 2σ(F2)] = 0.039 H atoms treated by a mixture of independent and constrained refinement
wR(F2) = 0.113 w = 1/[σ2(Fo2) + (0.0546P)2 + 0.1741P] where P = (Fo2 + 2Fc2)/3
S = 1.04 (Δ/σ)max < 0.001
2754 reflections Δρmax = 0.25 e Å3
154 parameters Δρmin = −0.16 e Å3
0 restraints Extinction correction: SHELXL97 (Sheldrick, 2008), Fc*=kFc[1+0.001xFc2λ3/sin(2θ)]-1/4
Primary atom site location: structure-invariant direct methods Extinction coefficient: 0.035 (4)

Special details

Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.

Fractional atomic coordinates and isotropic or equivalent isotropic displacement parameters (Å2)

x y z Uiso*/Ueq
O2 0.05286 (17) 0.31557 (5) 0.65108 (6) 0.0445 (2)
O3 0.68295 (18) 0.16361 (5) 0.49674 (7) 0.0501 (3)
O1 0.0285 (2) 0.15987 (5) 0.87280 (7) 0.0554 (3)
C6 0.3759 (2) 0.23786 (7) 0.57231 (9) 0.0396 (3)
H6 0.3799 0.2751 0.5214 0.047*
C2 0.2097 (2) 0.19456 (6) 0.72497 (8) 0.0376 (3)
C3 0.3673 (2) 0.12642 (7) 0.72331 (9) 0.0430 (3)
H3 0.3642 0.0890 0.7739 0.052*
C4 0.5284 (2) 0.11234 (7) 0.64902 (9) 0.0447 (3)
H4 0.6320 0.0662 0.6492 0.054*
C9 −0.1318 (3) 0.43691 (7) 0.59180 (9) 0.0447 (3)
C7 0.2148 (2) 0.25048 (6) 0.64716 (8) 0.0361 (2)
C5 0.5317 (2) 0.16901 (7) 0.57387 (9) 0.0398 (3)
C12 0.9705 (3) 0.09766 (8) 0.40030 (11) 0.0554 (3)
C1 0.0455 (3) 0.20717 (7) 0.80598 (9) 0.0459 (3)
H1 −0.0521 0.2544 0.8063 0.055*
C10 −0.2730 (3) 0.49054 (8) 0.60585 (11) 0.0539 (3)
C11 0.8314 (3) 0.09202 (8) 0.48871 (10) 0.0495 (3)
H11A 0.7066 0.0472 0.4822 0.059*
H11B 0.9646 0.0844 0.5485 0.059*
C8 0.0455 (3) 0.37140 (7) 0.57073 (9) 0.0453 (3)
H8A −0.0264 0.3465 0.5073 0.054*
H8B 0.2290 0.3907 0.5663 0.054*
C13 1.0861 (4) 0.10046 (11) 0.33041 (14) 0.0791 (5)
H10 −0.379 (4) 0.5352 (11) 0.6156 (14) 0.087 (6)*
H13 1.176 (5) 0.1042 (13) 0.2780 (18) 0.114 (7)*

Atomic displacement parameters (Å2)

U11 U22 U33 U12 U13 U23
O2 0.0548 (5) 0.0381 (4) 0.0443 (5) 0.0099 (4) 0.0197 (4) 0.0088 (3)
O3 0.0517 (5) 0.0511 (5) 0.0520 (5) 0.0140 (4) 0.0224 (4) 0.0074 (4)
O1 0.0824 (7) 0.0460 (5) 0.0421 (5) −0.0069 (4) 0.0231 (5) 0.0041 (4)
C6 0.0420 (6) 0.0392 (6) 0.0391 (6) 0.0024 (5) 0.0107 (5) 0.0070 (5)
C2 0.0419 (6) 0.0363 (6) 0.0351 (5) −0.0024 (4) 0.0070 (4) 0.0019 (4)
C3 0.0493 (7) 0.0398 (6) 0.0400 (6) 0.0020 (5) 0.0068 (5) 0.0085 (5)
C4 0.0453 (6) 0.0406 (6) 0.0484 (7) 0.0091 (5) 0.0081 (5) 0.0052 (5)
C9 0.0512 (7) 0.0403 (6) 0.0432 (6) 0.0027 (5) 0.0090 (5) 0.0061 (5)
C7 0.0376 (5) 0.0335 (5) 0.0377 (6) 0.0004 (4) 0.0072 (4) 0.0020 (4)
C5 0.0361 (5) 0.0439 (6) 0.0402 (6) 0.0021 (4) 0.0089 (4) 0.0009 (5)
C12 0.0588 (8) 0.0540 (8) 0.0555 (8) 0.0105 (6) 0.0152 (6) −0.0073 (6)
C1 0.0597 (7) 0.0398 (6) 0.0409 (6) −0.0003 (5) 0.0158 (5) 0.0017 (5)
C10 0.0645 (8) 0.0434 (7) 0.0551 (8) 0.0106 (6) 0.0129 (6) 0.0036 (6)
C11 0.0487 (7) 0.0486 (7) 0.0533 (7) 0.0094 (5) 0.0146 (6) −0.0023 (6)
C8 0.0520 (7) 0.0425 (6) 0.0437 (6) 0.0085 (5) 0.0147 (5) 0.0105 (5)
C13 0.0998 (13) 0.0800 (12) 0.0659 (10) 0.0122 (10) 0.0402 (10) −0.0076 (9)

Geometric parameters (Å, º)

O2—C7 1.3622 (13) C4—C5 1.3922 (16)
O2—C8 1.4292 (14) C4—H4 0.9300
O3—C5 1.3626 (13) C9—C10 1.1722 (18)
O3—C11 1.4235 (14) C9—C8 1.4608 (16)
O1—C1 1.2127 (14) C12—C13 1.166 (2)
C6—C7 1.3832 (15) C12—C11 1.4565 (18)
C6—C5 1.3905 (15) C1—H1 0.9300
C6—H6 0.9300 C10—H10 0.935 (19)
C2—C3 1.3886 (16) C11—H11A 0.9700
C2—C7 1.4109 (15) C11—H11B 0.9700
C2—C1 1.4611 (15) C8—H8A 0.9700
C3—C4 1.3814 (17) C8—H8B 0.9700
C3—H3 0.9300 C13—H13 0.89 (2)
C7—O2—C8 116.99 (8) C6—C5—C4 121.39 (10)
C5—O3—C11 117.16 (9) C13—C12—C11 178.21 (17)
C7—C6—C5 119.35 (10) O1—C1—C2 124.02 (11)
C7—C6—H6 120.3 O1—C1—H1 118.0
C5—C6—H6 120.3 C2—C1—H1 118.0
C3—C2—C7 118.20 (10) C9—C10—H10 176.8 (12)
C3—C2—C1 120.16 (10) O3—C11—C12 108.22 (11)
C7—C2—C1 121.65 (10) O3—C11—H11A 110.1
C4—C3—C2 122.26 (11) C12—C11—H11A 110.1
C4—C3—H3 118.9 O3—C11—H11B 110.1
C2—C3—H3 118.9 C12—C11—H11B 110.1
C3—C4—C5 118.25 (11) H11A—C11—H11B 108.4
C3—C4—H4 120.9 O2—C8—C9 107.67 (9)
C5—C4—H4 120.9 O2—C8—H8A 110.2
C10—C9—C8 177.88 (13) C9—C8—H8A 110.2
O2—C7—C6 123.48 (9) O2—C8—H8B 110.2
O2—C7—C2 115.97 (9) C9—C8—H8B 110.2
C6—C7—C2 120.55 (10) H8A—C8—H8B 108.5
O3—C5—C6 113.87 (10) C12—C13—H13 178.1 (16)
O3—C5—C4 124.74 (10)
C7—C2—C3—C4 0.52 (18) C11—O3—C5—C4 4.98 (17)
C1—C2—C3—C4 −179.18 (11) C7—C6—C5—O3 −179.57 (10)
C2—C3—C4—C5 0.20 (19) C7—C6—C5—C4 0.22 (18)
C8—O2—C7—C6 2.28 (16) C3—C4—C5—O3 179.19 (11)
C8—O2—C7—C2 −177.39 (10) C3—C4—C5—C6 −0.58 (18)
C5—C6—C7—O2 −179.13 (10) C3—C2—C1—O1 −2.48 (19)
C5—C6—C7—C2 0.53 (17) C7—C2—C1—O1 177.83 (12)
C3—C2—C7—O2 178.80 (10) C5—O3—C11—C12 178.25 (10)
C1—C2—C7—O2 −1.51 (16) C13—C12—C11—O3 166 (6)
C3—C2—C7—C6 −0.89 (16) C7—O2—C8—C9 −178.20 (10)
C1—C2—C7—C6 178.81 (11) C10—C9—C8—O2 −177 (100)
C11—O3—C5—C6 −175.24 (11)

Hydrogen-bond geometry (Å, º)

D—H···A D—H H···A D···A D—H···A
C6—H6···O1i 0.93 2.48 3.3616 (14) 159

Symmetry code: (i) x+1/2, −y+1/2, z−1/2.

Footnotes

Supplementary data and figures for this paper are available from the IUCr electronic archives (Reference: BT5961).

References

  1. Bernstein, J., Davis, R. E., Shimoni, L. & Chang, N.-L. (1995). Angew. Chem. Int. Ed. Engl. 34, 1555–1573.
  2. Bruker (2008). APEX2, SAINT and SADABS Bruker AXS Inc., Madison, Wisconsin, USA.
  3. Delogu, G., Podda, G., Corda, M., Fadda, M. B., Fais, A. & Era, B. (2010). Bioorg. Med. Chem. Lett. 20, 6138–6140. [DOI] [PubMed]
  4. Farrugia, L. J. (1997). J. Appl. Cryst. 30, 565.
  5. Ley, J. P. & Bertram, H. J. (2001). Bioorg. Med. Chem. Lett. 9, 1879–1885. [DOI] [PubMed]
  6. Sheldrick, G. M. (2008). Acta Cryst. A64, 112–122. [DOI] [PubMed]
  7. Spek, A. L. (2009). Acta Cryst. D65, 148–155. [DOI] [PMC free article] [PubMed]
  8. Zhao, X., Song, D. K., Radbil, A. B. & Radbil, B. A. (2007). Russ. J. Appl. Chem. 80, 1373–1375.

Associated Data

This section collects any data citations, data availability statements, or supplementary materials included in this article.

Supplementary Materials

Crystal structure: contains datablock(s) global, I. DOI: 10.1107/S1600536812031637/bt5961sup1.cif

e-68-o2465-sup1.cif (15.7KB, cif)

Structure factors: contains datablock(s) I. DOI: 10.1107/S1600536812031637/bt5961Isup2.hkl

e-68-o2465-Isup2.hkl (132.5KB, hkl)

Supplementary material file. DOI: 10.1107/S1600536812031637/bt5961Isup3.cml

Additional supplementary materials: crystallographic information; 3D view; checkCIF report


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