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Acta Crystallographica Section E: Structure Reports Online logoLink to Acta Crystallographica Section E: Structure Reports Online
. 2012 Jul 18;68(Pt 8):o2491. doi: 10.1107/S1600536812032394

5-Bromo-3-(3-fluoro­phenyl­sulfin­yl)-2-methyl-1-benzofuran

Hong Dae Choi a, Pil Ja Seo a, Uk Lee b,*
PMCID: PMC3414946  PMID: 22904933

Abstract

In the title compound, C15H10BrFO2S, the 3-fluoro­phenyl ring makes a dihedral angle of 85.0 (1)° with the mean plane [r.m.s. deviation = 0.008 (2) Å] of the benzofuran fragment. In the crystal, mol­ecules are linked by weak C—H⋯O hydrogen bonds and a Br⋯O contact [3.200 (3) Å]. The crystal structure also exhibits slipped π–π inter­actions between the benzene and furan rings of neighbouring mol­ecules [centroid–centroid distance = 3.619 (4) Å and slippage of 1.389 (4) Å]. In the 3-fluoro­phenyl ring, the F atom is disordered over two positions with site-occupancy factors of 0.583 (5) and 0.417 (5).

Related literature  

For background information and the crystal structures of related compounds, see: Choi et al. (2010a ,b , 2012). For a review of halogen bonding, see: Politzer et al. (2007).graphic file with name e-68-o2491-scheme1.jpg

Experimental  

Crystal data  

  • C15H10BrFO2S

  • M r = 353.20

  • Monoclinic, Inline graphic

  • a = 13.0488 (4) Å

  • b = 11.1874 (3) Å

  • c = 9.9295 (3) Å

  • β = 105.709 (2)°

  • V = 1395.39 (7) Å3

  • Z = 4

  • Mo Kα radiation

  • μ = 3.10 mm−1

  • T = 173 K

  • 0.25 × 0.24 × 0.13 mm

Data collection  

  • Bruker SMART APEXII CCD diffractometer

  • Absorption correction: multi-scan (SADABS; Bruker, 2009) T min = 0.494, T max = 0.746

  • 13225 measured reflections

  • 3460 independent reflections

  • 2392 reflections with I > 2σ(I)

  • R int = 0.048

Refinement  

  • R[F 2 > 2σ(F 2)] = 0.043

  • wR(F 2) = 0.115

  • S = 1.03

  • 3460 reflections

  • 192 parameters

  • 14 restraints

  • H-atom parameters constrained

  • Δρmax = 0.61 e Å−3

  • Δρmin = −1.10 e Å−3

Data collection: APEX2 (Bruker, 2009); cell refinement: SAINT (Bruker, 2009); data reduction: SAINT; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008); molecular graphics: ORTEP-3 (Farrugia, 1997) and DIAMOND (Brandenburg, 1998); software used to prepare material for publication: SHELXL97.

Supplementary Material

Crystal structure: contains datablock(s) global, I. DOI: 10.1107/S1600536812032394/kp2435sup1.cif

e-68-o2491-sup1.cif (18.1KB, cif)

Structure factors: contains datablock(s) I. DOI: 10.1107/S1600536812032394/kp2435Isup2.hkl

e-68-o2491-Isup2.hkl (169.7KB, hkl)

Supplementary material file. DOI: 10.1107/S1600536812032394/kp2435Isup3.cml

Additional supplementary materials: crystallographic information; 3D view; checkCIF report

Table 1. Hydrogen-bond geometry (Å, °).

D—H⋯A D—H H⋯A DA D—H⋯A
C5—H5⋯O1i 0.95 2.50 3.429 (4) 167
C9—H9A⋯O2ii 0.98 2.44 3.269 (4) 142

Symmetry codes: (i) Inline graphic; (ii) Inline graphic.

Acknowledgments

This work was supported by the Blue-Bio Industry Regional Innovation Center (RIC08-06-07) at Dongeui University as an RIC program under the Ministry of Knowledge Economy and Busan city.

supplementary crystallographic information

Comment

As a part of our ongoing study of 5-bromo-2-methyl-1-benzofuran derivatives containing 3-(4-fluorophenylsulfinyl) (Choi et al., 2010a), 3-(4-chlorophenylsulfinyl) (Choi et al., 2010b), and 3-(4-methylphenylsulfinyl) (Choi et al., 2012) substituents, we report herein the crystal structure of the title compound.

In the title molecule (Fig. 1), the benzofuran unit is planar with a mean deviation of 0.008 (2) Å from the least-squares plane defined by the nine constituent atoms. In the 3-fluorophenyl ring, the F atom is disordered over two positions with site-occupancy factors, from refinement of 0.583 (5)(part A) and 0.417 (5)(part B). The dihedral angle between the 3-fluorophenyl ring and the mean plane of the benzofuran ring is 85.0 (1)°. In the crystal structure (Fig. 2), molecules are connected by weak C–H···O hydrogen bonds (Table 1), and a Br···O interaction between the bromine and the oxygen of the S═O unit [Br···O2i = 3.200 (3) Å, C4—BrI···O2i = 159.51 (11)°] (Politzer et al., 2007). The crystal packing (Fig. 3) also exhibits slipped π–π interactions between the benzene and furan rings of neighbouring molecules, with a Cg1···Cg2iv distance of 3.619 (4) Å and an interplanar distance of 3.342 (4) Å resulting in a slippage of 1.389 (4) Å (Cg1 and Cg2 are the centroids of the C2-C7 benzene ring and the C1/C2/C7/O1/C8 furan ring, respectively).

Experimental

3-Chloroperoxybenzoic acid (77%, 224 mg, 1.0 mmol) was added in small portions to a stirred solution of 5-bromo-3-(3-fluorophenylsulfanyl)-2-methyl-1-benzofurann (303 mg, 0.9 mmol) in dichloromethane (30 mL) at 273 K. After being stirred at room temperature for 4 h, the mixture was washed with saturated sodium bicarbonate solution and the organic layer was separated, dried over magnesium sulfate, filtered and concentrated at reduced pressure. The residue was purified by column chromatography (hexane–ethyl acetate, 2:1 v/v) to afford the title compound as a colourless solid [yield 74%, m.p. 393–394 K; Rf = 0.58 (hexane–ethyl acetate, 2:1 v/v)]. Single crystals suitable for X-ray diffraction were prepared by slow evaporation of a solution of the title compound in acetone at room temperature.

Refinement

All H atoms were positioned geometrically and refined using a riding model, with C—H = 0.95 Å for aryl and 0.98 Å for methyl H atoms. Uiso(H) = 1.2Ueq(C) for aryl and 1.5Ueq(C) for methyl H atoms. The positions of methyl hydrogens were optimized rotationally. The F1 atom of the 3-fluorophenyl ring is disordered over two positions with site occupancy factors, from refinement of 0.583 (5) (part A) and 0.417 (5) (part B). The distance of equivalent C-F pairs were restrained to 1.330 (5) Å using the SHELXL-97 command DFIX, and displacement ellipsoids of F1 set were restrained using the SHELXL-97 command ISOR.

Figures

Fig. 1.

Fig. 1.

The molecular structure of the title compound with the atom numbering scheme. Displacement ellipsoids are drawn at the 50% probability level. H atoms are presented as small spheres of arbitrary radius. The F atom of the 3-fluorophenyl ring is disordered over two positions with site occupancy factors, from refinement of 0.583 (5)(part A) and 0.417 (5) (part B).

Fig. 2.

Fig. 2.

A view of the C—H···O and Br···O interactions (dotted lines) in the crystal structure of the title compound. H atoms non-participating in hydrogen-bonding and disodered part B atoms were omitted for clarity. [Symmetry codes: (i) x, - y + 1/2, z + 1/2; (ii) - x + 2, y - 1/2, - z + 3/2; (iii) x, - y + 3/2, z + 1/2; (v) x, - y + 1/2, z - 1/2; (vi) - x + 2, y + 1/2,- z + 3/2; (vii) x, - y + 3/2, z - 1/2.]

Fig. 3.

Fig. 3.

A view of the π–π interactions (dotted lines) in the crystal structure of the title compound. All H atoms and disordered part B atoms were omitted for clarity. [Symmetry codes: (iv) - x + 2, - y + 1, - z + 1.]

Crystal data

C15H10BrFO2S F(000) = 704
Mr = 353.20 Dx = 1.681 Mg m3
Monoclinic, P21/c Mo Kα radiation, λ = 0.71073 Å
Hall symbol: -P 2ybc Cell parameters from 3368 reflections
a = 13.0488 (4) Å θ = 2.4–26.5°
b = 11.1874 (3) Å µ = 3.10 mm1
c = 9.9295 (3) Å T = 173 K
β = 105.709 (2)° Block, colourless
V = 1395.39 (7) Å3 0.25 × 0.24 × 0.13 mm
Z = 4

Data collection

Bruker SMART APEXII CCD diffractometer 3460 independent reflections
Radiation source: rotating anode 2392 reflections with I > 2σ(I)
Graphite multilayer monochromator Rint = 0.048
Detector resolution: 10.0 pixels mm-1 θmax = 28.3°, θmin = 1.6°
φ and ω scans h = −17→17
Absorption correction: multi-scan (SADABS; Bruker, 2009) k = −13→14
Tmin = 0.494, Tmax = 0.746 l = −13→12
13225 measured reflections

Refinement

Refinement on F2 Primary atom site location: structure-invariant direct methods
Least-squares matrix: full Secondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.043 Hydrogen site location: difference Fourier map
wR(F2) = 0.115 H-atom parameters constrained
S = 1.03 w = 1/[σ2(Fo2) + (0.0477P)2 + 0.9756P] where P = (Fo2 + 2Fc2)/3
3460 reflections (Δ/σ)max < 0.001
192 parameters Δρmax = 0.61 e Å3
14 restraints Δρmin = −1.10 e Å3

Special details

Geometry. All esds (except the esd in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell esds are taken into account individually in the estimation of esds in distances, angles and torsion angles; correlations between esds in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell esds is used for estimating esds involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > 2sigma(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.

Fractional atomic coordinates and isotropic or equivalent isotropic displacement parameters (Å2)

x y z Uiso*/Ueq Occ. (<1)
Br1 0.78842 (3) 0.16727 (3) 0.52938 (5) 0.06445 (17)
S1 0.70738 (6) 0.67272 (7) 0.23040 (7) 0.03887 (19)
O1 0.93643 (16) 0.67342 (18) 0.5796 (2) 0.0384 (5)
O2 0.7178 (2) 0.5873 (2) 0.1208 (2) 0.0595 (7)
C1 0.8025 (2) 0.6387 (3) 0.3879 (3) 0.0333 (6)
C2 0.8265 (2) 0.5272 (3) 0.4624 (3) 0.0326 (6)
C3 0.7894 (2) 0.4090 (3) 0.4423 (3) 0.0385 (7)
H3 0.7343 0.3862 0.3625 0.046*
C4 0.8371 (3) 0.3279 (3) 0.5442 (4) 0.0426 (7)
C5 0.9200 (3) 0.3574 (3) 0.6612 (3) 0.0445 (8)
H5 0.9500 0.2978 0.7285 0.053*
C6 0.9583 (2) 0.4726 (3) 0.6796 (3) 0.0411 (7)
H6 1.0153 0.4945 0.7578 0.049*
C7 0.9100 (2) 0.5543 (3) 0.5793 (3) 0.0345 (6)
C8 0.8706 (2) 0.7221 (3) 0.4607 (3) 0.0352 (6)
C9 0.8858 (3) 0.8504 (3) 0.4392 (4) 0.0463 (8)
H9A 0.8629 0.8968 0.5096 0.069*
H9B 0.8435 0.8738 0.3456 0.069*
H9C 0.9613 0.8662 0.4482 0.069*
C10 0.5915 (2) 0.6284 (3) 0.2817 (3) 0.0387 (7)
C11 0.5255 (3) 0.5431 (3) 0.2057 (4) 0.0532 (9)
H11 0.5429 0.5013 0.1317 0.064*
C12 0.4339 (3) 0.5211 (4) 0.2412 (6) 0.0788 (15) 0.583 (5)
H12 0.3870 0.4631 0.1877 0.095* 0.583 (5)
C12' 0.4339 (3) 0.5211 (4) 0.2412 (6) 0.0788 (15) 0.42
F1' 0.3631 (4) 0.4412 (5) 0.1945 (7) 0.083 (2) 0.417 (5)
C13 0.4043 (3) 0.5740 (6) 0.3450 (6) 0.0877 (17)
H13 0.3394 0.5553 0.3661 0.105*
C14 0.4731 (3) 0.6561 (5) 0.4180 (4) 0.0805 (17) 0.583 (5)
F1 0.4478 (3) 0.6915 (4) 0.5278 (4) 0.0791 (15) 0.583 (5)
C14' 0.4731 (3) 0.6561 (5) 0.4180 (4) 0.0805 (17) 0.42
H14' 0.4556 0.6940 0.4944 0.097* 0.417 (5)
C15 0.5663 (3) 0.6885 (4) 0.3896 (3) 0.0542 (10)
H15 0.6111 0.7490 0.4414 0.065*

Atomic displacement parameters (Å2)

U11 U22 U33 U12 U13 U23
Br1 0.0542 (2) 0.0364 (2) 0.0981 (4) 0.00465 (16) 0.0128 (2) 0.00779 (18)
S1 0.0434 (4) 0.0439 (4) 0.0301 (4) 0.0032 (3) 0.0112 (3) 0.0067 (3)
O1 0.0351 (10) 0.0423 (12) 0.0376 (11) −0.0004 (9) 0.0096 (8) −0.0034 (9)
O2 0.0720 (16) 0.0729 (18) 0.0372 (12) 0.0076 (14) 0.0210 (11) −0.0055 (11)
C1 0.0307 (13) 0.0405 (16) 0.0317 (14) 0.0033 (12) 0.0134 (11) 0.0013 (12)
C2 0.0280 (12) 0.0398 (16) 0.0324 (14) 0.0050 (12) 0.0125 (11) 0.0011 (12)
C3 0.0323 (13) 0.0404 (17) 0.0427 (16) 0.0037 (13) 0.0099 (12) −0.0013 (13)
C4 0.0384 (15) 0.0360 (17) 0.0557 (19) 0.0062 (13) 0.0163 (14) 0.0028 (14)
C5 0.0433 (17) 0.0472 (19) 0.0441 (17) 0.0180 (14) 0.0139 (14) 0.0079 (14)
C6 0.0365 (15) 0.050 (2) 0.0343 (15) 0.0097 (14) 0.0059 (12) −0.0037 (13)
C7 0.0313 (13) 0.0379 (16) 0.0361 (15) 0.0031 (12) 0.0123 (11) −0.0020 (12)
C8 0.0339 (14) 0.0410 (17) 0.0353 (15) 0.0030 (13) 0.0170 (12) 0.0021 (13)
C9 0.0479 (18) 0.0395 (18) 0.055 (2) −0.0038 (14) 0.0197 (15) 0.0019 (15)
C10 0.0347 (14) 0.0477 (18) 0.0300 (14) 0.0053 (13) 0.0025 (11) 0.0084 (13)
C11 0.0481 (18) 0.051 (2) 0.055 (2) 0.0010 (16) 0.0041 (16) 0.0024 (16)
C12 0.044 (2) 0.083 (3) 0.101 (4) −0.009 (2) 0.006 (2) 0.025 (3)
C12' 0.044 (2) 0.083 (3) 0.101 (4) −0.009 (2) 0.006 (2) 0.025 (3)
F1' 0.068 (3) 0.070 (4) 0.101 (4) −0.032 (3) 0.007 (3) −0.012 (3)
C13 0.0324 (18) 0.139 (5) 0.090 (3) −0.001 (2) 0.014 (2) 0.040 (3)
C14 0.042 (2) 0.151 (5) 0.050 (2) 0.012 (3) 0.0150 (17) 0.012 (3)
F1 0.057 (2) 0.120 (4) 0.069 (3) 0.005 (2) 0.0304 (19) −0.028 (2)
C14' 0.042 (2) 0.151 (5) 0.050 (2) 0.012 (3) 0.0150 (17) 0.012 (3)
C15 0.0370 (16) 0.086 (3) 0.0367 (17) 0.0038 (17) 0.0056 (13) −0.0030 (17)

Geometric parameters (Å, º)

Br1—C4 1.898 (3) C6—H6 0.9500
Br1—O2i 3.200 (3) C8—C9 1.472 (4)
S1—O2 1.482 (3) C9—H9A 0.9800
S1—C1 1.755 (3) C9—H9B 0.9800
S1—C10 1.792 (3) C9—H9C 0.9800
O1—C8 1.371 (3) C10—C11 1.367 (5)
O1—C7 1.377 (4) C10—C15 1.378 (5)
C1—C8 1.355 (4) C11—C12 1.357 (6)
C1—C2 1.441 (4) C11—H11 0.9500
C2—C7 1.393 (4) C12—C13 1.333 (7)
C2—C3 1.404 (4) C12—H12 0.9500
C3—C4 1.376 (4) C13—C14 1.349 (7)
C3—H3 0.9500 C13—H13 0.9500
C4—C5 1.396 (5) C14—F1 1.284 (4)
C5—C6 1.377 (5) C14—C15 1.370 (5)
C5—H5 0.9500 C15—H15 0.9500
C6—C7 1.373 (4)
C4—Br1—O2i 159.51 (11) C1—C8—C9 133.6 (3)
O2—S1—C1 109.35 (14) O1—C8—C9 115.8 (3)
O2—S1—C10 106.41 (16) C8—C9—H9A 109.5
C1—S1—C10 97.72 (13) C8—C9—H9B 109.5
C8—O1—C7 106.5 (2) H9A—C9—H9B 109.5
C8—C1—C2 107.6 (2) C8—C9—H9C 109.5
C8—C1—S1 122.0 (2) H9A—C9—H9C 109.5
C2—C1—S1 130.4 (2) H9B—C9—H9C 109.5
C7—C2—C3 119.0 (3) C11—C10—C15 121.5 (3)
C7—C2—C1 104.6 (3) C11—C10—S1 119.4 (3)
C3—C2—C1 136.4 (3) C15—C10—S1 118.9 (3)
C4—C3—C2 116.6 (3) C12—C11—C10 116.8 (4)
C4—C3—H3 121.7 C12—C11—H11 121.6
C2—C3—H3 121.7 C10—C11—H11 121.6
C3—C4—C5 123.4 (3) C13—C12—C11 125.4 (4)
C3—C4—Br1 119.5 (2) C13—C12—H12 117.3
C5—C4—Br1 117.1 (2) C11—C12—H12 117.3
C6—C5—C4 120.2 (3) C12—C13—C14 115.3 (4)
C6—C5—H5 119.9 C12—C13—H13 122.3
C4—C5—H5 119.9 C14—C13—H13 122.3
C7—C6—C5 116.6 (3) F1—C14—C13 112.3 (4)
C7—C6—H6 121.7 F1—C14—C15 122.6 (4)
C5—C6—H6 121.7 C13—C14—C15 124.6 (4)
C6—C7—O1 125.2 (3) C14—C15—C10 116.3 (4)
C6—C7—C2 124.2 (3) C14—C15—H15 121.8
O1—C7—C2 110.6 (2) C10—C15—H15 121.8
C1—C8—O1 110.7 (3)
O2—S1—C1—C8 127.1 (2) C3—C2—C7—O1 178.8 (2)
C10—S1—C1—C8 −122.4 (3) C1—C2—C7—O1 0.4 (3)
O2—S1—C1—C2 −51.6 (3) C2—C1—C8—O1 −1.2 (3)
C10—S1—C1—C2 58.9 (3) S1—C1—C8—O1 179.78 (19)
C8—C1—C2—C7 0.5 (3) C2—C1—C8—C9 −179.9 (3)
S1—C1—C2—C7 179.4 (2) S1—C1—C8—C9 1.2 (5)
C8—C1—C2—C3 −177.5 (3) C7—O1—C8—C1 1.4 (3)
S1—C1—C2—C3 1.3 (5) C7—O1—C8—C9 −179.7 (3)
C7—C2—C3—C4 2.1 (4) O2—S1—C10—C11 −9.5 (3)
C1—C2—C3—C4 179.9 (3) C1—S1—C10—C11 −122.3 (3)
C2—C3—C4—C5 −1.5 (5) O2—S1—C10—C15 176.0 (3)
C2—C3—C4—Br1 177.6 (2) C1—S1—C10—C15 63.1 (3)
O2i—Br1—C4—C3 −138.1 (3) C15—C10—C11—C12 0.4 (5)
O2i—Br1—C4—C5 41.0 (5) S1—C10—C11—C12 −174.0 (3)
C3—C4—C5—C6 0.0 (5) C10—C11—C12—C13 −1.3 (7)
Br1—C4—C5—C6 −179.1 (2) C11—C12—C13—C14 0.3 (7)
C4—C5—C6—C7 0.9 (5) C12—C13—C14—F1 −170.9 (5)
C5—C6—C7—O1 179.6 (3) C12—C13—C14—C15 1.7 (7)
C5—C6—C7—C2 −0.3 (5) F1—C14—C15—C10 169.4 (4)
C8—O1—C7—C6 179.0 (3) C13—C14—C15—C10 −2.5 (7)
C8—O1—C7—C2 −1.1 (3) C11—C10—C15—C14 1.4 (5)
C3—C2—C7—C6 −1.3 (4) S1—C10—C15—C14 175.8 (3)
C1—C2—C7—C6 −179.7 (3)

Symmetry code: (i) x, −y+1/2, z+1/2.

Hydrogen-bond geometry (Å, º)

D—H···A D—H H···A D···A D—H···A
C5—H5···O1ii 0.95 2.50 3.429 (4) 167
C9—H9A···O2iii 0.98 2.44 3.269 (4) 142

Symmetry codes: (ii) −x+2, y−1/2, −z+3/2; (iii) x, −y+3/2, z+1/2.

Footnotes

Supplementary data and figures for this paper are available from the IUCr electronic archives (Reference: KP2435).

References

  1. Brandenburg, K. (1998). DIAMOND Crystal Impact GbR, Bonn, Germany.
  2. Bruker (2009). APEX2, SADABS and SAINT Bruker AXS Inc., Madison, Wisconsin, USA.
  3. Choi, H. D., Seo, P. J. & Lee, U. (2012). Acta Cryst. E68, o1298. [DOI] [PMC free article] [PubMed]
  4. Choi, H. D., Seo, P. J., Son, B. W. & Lee, U. (2010a). Acta Cryst. E66, o1297. [DOI] [PMC free article] [PubMed]
  5. Choi, H. D., Seo, P. J., Son, B. W. & Lee, U. (2010b). Acta Cryst. E66, o2721. [DOI] [PMC free article] [PubMed]
  6. Farrugia, L. J. (1997). J. Appl. Cryst. 30, 565.
  7. Politzer, P., Lane, P., Concha, M. C., Ma, Y. & Murray, J. S. (2007). J. Mol. Model. 13, 305–311. [DOI] [PubMed]
  8. Sheldrick, G. M. (2008). Acta Cryst. A64, 112–122. [DOI] [PubMed]

Associated Data

This section collects any data citations, data availability statements, or supplementary materials included in this article.

Supplementary Materials

Crystal structure: contains datablock(s) global, I. DOI: 10.1107/S1600536812032394/kp2435sup1.cif

e-68-o2491-sup1.cif (18.1KB, cif)

Structure factors: contains datablock(s) I. DOI: 10.1107/S1600536812032394/kp2435Isup2.hkl

e-68-o2491-Isup2.hkl (169.7KB, hkl)

Supplementary material file. DOI: 10.1107/S1600536812032394/kp2435Isup3.cml

Additional supplementary materials: crystallographic information; 3D view; checkCIF report


Articles from Acta Crystallographica Section E: Structure Reports Online are provided here courtesy of International Union of Crystallography

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