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Acta Crystallographica Section E: Structure Reports Online logoLink to Acta Crystallographica Section E: Structure Reports Online
. 2012 Jul 25;68(Pt 8):o2547. doi: 10.1107/S1600536812030930

Phenyl N-(5-chloro-2-nitro­phenyl)carbamate

Bao-Hua Zou a, Zheng Fang a, Hui Zhong a, Guo Kai b,*, Ping Wei b
PMCID: PMC3414992  PMID: 22904979

Abstract

In the title compound, C13H9ClN2O4, the dihedral angle between the benzene rings is 79.5 (1)°. The mean plane of the carbamate group makes angles of 7.4 (2) and 73.6 (2)° with the mean planes of the two benzene rings. In the crystal, weak C—H⋯O inter­actions are observed between the mol­ecules, connecting them into a two-dimensional network.

Related literature  

For details of dovitinib, of which the title compound is a derivative, see: Huynh (2010). For the synthesis of the title compound, see: Bandgar et al. (2011). For bond lengths, see: Zhu et al. (2007).graphic file with name e-68-o2547-scheme1.jpg

Experimental  

Crystal data  

  • C13H9ClN2O4

  • M r = 292.67

  • Monoclinic, Inline graphic

  • a = 8.4760 (17) Å

  • b = 5.9270 (12) Å

  • c = 24.996 (5) Å

  • β = 94.77 (3)°

  • V = 1251.4 (4) Å3

  • Z = 4

  • Mo Kα radiation

  • μ = 0.32 mm−1

  • T = 293 K

  • 0.30 × 0.20 × 0.10 mm

Data collection  

  • Enraf–Nonius CAD-4 diffractometer

  • Absorption correction: ψ scan (North et al., 1968) T min = 0.910, T max = 0.969

  • 2466 measured reflections

  • 2300 independent reflections

  • 1593 reflections with I > 2σ(I)

  • R int = 0.084

  • 3 standard reflections every 200 reflections intensity decay: 1%

Refinement  

  • R[F 2 > 2σ(F 2)] = 0.046

  • wR(F 2) = 0.155

  • S = 1.00

  • 2300 reflections

  • 182 parameters

  • H-atom parameters constrained

  • Δρmax = 0.22 e Å−3

  • Δρmin = −0.22 e Å−3

Data collection: CAD-4 EXPRESS (Enraf–Nonius, 1994); cell refinement: CAD-4 EXPRESS; data reduction: XCAD4 (Harms & Wocadlo, 1995); program(s) used to solve structure: SHELXS97 (Sheldrick, 2008); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008); molecular graphics: SHELXTL-Plus (Sheldrick, 2008); software used to prepare material for publication: SHELXL97.

Supplementary Material

Crystal structure: contains datablock(s) global, I. DOI: 10.1107/S1600536812030930/jj2143sup1.cif

e-68-o2547-sup1.cif (21.9KB, cif)

Structure factors: contains datablock(s) I. DOI: 10.1107/S1600536812030930/jj2143Isup2.hkl

e-68-o2547-Isup2.hkl (113.1KB, hkl)

Supplementary material file. DOI: 10.1107/S1600536812030930/jj2143Isup3.cml

Additional supplementary materials: crystallographic information; 3D view; checkCIF report

Table 1. Hydrogen-bond geometry (Å, °).

D—H⋯A D—H H⋯A DA D—H⋯A
C4—H4A⋯O2i 0.93 2.48 3.312 (4) 150
C13—H13A⋯O1ii 0.93 2.56 3.419 (4) 154

Symmetry codes: (i) Inline graphic; (ii) Inline graphic.

Acknowledgments

This research work was financially supported by the School of Pharmaceutical Science, Nanjing University of Technology, and the National Key Basic Research Program of China (973 Program) (grant Nos. 2011CB710803 and 2012CB725204).

supplementary crystallographic information

Comment

The title compound, C13H9ClN2O4, (I), is an important derivative of Dovitinib (Huynh, 2010). We report herein its crystal structure.

In the title compound, C13H9ClN2O4, the dihedral angle between the two benzene rings is 79.5 (1)° (Fig. 1). The angles between the mean plane of the carbamate group (N2/C7/O3/O4) and the two 6-membered benzene rings (C1–C6 and C8–C13) is 7.4° and 73.6°, respectively. Bond lengths are in normal ranges (Zhu et al., 2007). In the crystal structure, weak C—H···O (Table 1 )intermolecular interactions are observed which link the molecules into a two-dimensional network array (Fig. 2).

Experimental

5-chloro-2-nitroaniline (10.46 mmol, 1.80 g) and Et3N (1.5 ml) were dissolved in dichloromethane (30 ml). Phenyl carbonochloridate (19.23 mmol, 3.01 g) was added to the solution and the reaction mixture stired at room temperature for 5 h. The solution was washed with water (15 ml) for 3 times, dried and concentrated to get the crude. The crude was purified by ethanol to get the title compound (1.83 g) (Bandgar et al. 2011). pure: yellow solid. Crystals of the title compound for X-ray diffraction were obtained by slow evaporation of an ethanol solution.

Refinement

H atoms were positioned geometrically with C—H = 0.93 and N—H = 0.86 for aromatic and amine, respectively, and constrained to ride on their parent atoms, with Uiso(H) = 1.2 times Ueq(C).

Figures

Fig. 1.

Fig. 1.

The molecular structure of the title compound, (I), showing the atom-labeling scheme and 50% probability displacement ellipsoids.

Fig. 2.

Fig. 2.

Packing diagram of the title compound viewed along the a axis. Dashed lines indicate weak C—H···O intermolecular interactions which link the molecules into a two-dimensional network array. Remaining H atoms have been omitted for clarity.

Crystal data

C13H9ClN2O4 F(000) = 600
Mr = 292.67 Dx = 1.553 Mg m3
Monoclinic, P21/c Mo Kα radiation, λ = 0.71073 Å
Hall symbol: -P 2ybc Cell parameters from 25 reflections
a = 8.4760 (17) Å θ = 9–13°
b = 5.9270 (12) Å µ = 0.32 mm1
c = 24.996 (5) Å T = 293 K
β = 94.77 (3)° Block, yellow
V = 1251.4 (4) Å3 0.30 × 0.20 × 0.10 mm
Z = 4

Data collection

Enraf–Nonius CAD-4 diffractometer 1593 reflections with I > 2σ(I)
Radiation source: fine-focus sealed tube Rint = 0.084
Graphite monochromator θmax = 25.4°, θmin = 1.6°
ω/2θ scans h = 0→10
Absorption correction: ψ scan (North et al., 1968) k = 0→7
Tmin = 0.910, Tmax = 0.969 l = −30→30
2466 measured reflections 3 standard reflections every 200 reflections
2300 independent reflections intensity decay: 1%

Refinement

Refinement on F2 Secondary atom site location: difference Fourier map
Least-squares matrix: full Hydrogen site location: inferred from neighbouring sites
R[F2 > 2σ(F2)] = 0.046 H-atom parameters constrained
wR(F2) = 0.155 w = 1/[σ2(Fo2) + (0.095P)2] where P = (Fo2 + 2Fc2)/3
S = 1.00 (Δ/σ)max < 0.001
2300 reflections Δρmax = 0.22 e Å3
182 parameters Δρmin = −0.22 e Å3
0 restraints Extinction correction: SHELXL97 (Sheldrick, 2008), Fc*=kFc[1+0.001xFc2λ3/sin(2θ)]-1/4
Primary atom site location: structure-invariant direct methods Extinction coefficient: 0.022 (4)

Special details

Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R-factors based on ALL data will be even larger.

Fractional atomic coordinates and isotropic or equivalent isotropic displacement parameters (Å2)

x y z Uiso*/Ueq
Cl 0.57503 (11) 0.19442 (15) −0.05438 (3) 0.0609 (3)
O1 1.0095 (3) 0.7195 (4) 0.14287 (9) 0.0616 (7)
N1 0.9731 (3) 0.7720 (4) 0.09605 (10) 0.0423 (6)
C1 0.7096 (3) 0.2956 (5) 0.04383 (11) 0.0414 (7)
H1A 0.6625 0.1637 0.0548 0.050*
O2 1.0200 (3) 0.9469 (4) 0.07710 (9) 0.0662 (7)
N2 0.8211 (3) 0.3679 (4) 0.13502 (9) 0.0459 (6)
H2A 0.8800 0.4568 0.1552 0.055*
C2 0.6891 (3) 0.3616 (5) −0.00907 (11) 0.0440 (7)
O3 0.6855 (3) 0.0324 (4) 0.14033 (8) 0.0499 (6)
C3 0.7548 (4) 0.5578 (5) −0.02738 (12) 0.0515 (8)
H3A 0.7379 0.6001 −0.0632 0.062*
O4 0.7949 (3) 0.2174 (4) 0.21348 (8) 0.0523 (6)
C4 0.8447 (4) 0.6877 (5) 0.00832 (11) 0.0455 (7)
H4A 0.8895 0.8203 −0.0033 0.055*
C5 0.8702 (3) 0.6245 (5) 0.06190 (11) 0.0380 (7)
C6 0.8009 (3) 0.4261 (5) 0.08095 (11) 0.0370 (6)
C7 0.7591 (3) 0.1870 (5) 0.16017 (11) 0.0384 (7)
C8 0.7459 (3) 0.0532 (5) 0.24940 (10) 0.0400 (7)
C9 0.6295 (4) 0.1140 (5) 0.28161 (12) 0.0458 (7)
H9A 0.5780 0.2521 0.2771 0.055*
C10 0.5908 (4) −0.0359 (6) 0.32108 (12) 0.0546 (9)
H10A 0.5124 0.0013 0.3434 0.066*
C11 0.6686 (4) −0.2403 (6) 0.32724 (12) 0.0563 (9)
H11A 0.6420 −0.3405 0.3537 0.068*
C12 0.7838 (4) −0.2955 (6) 0.29484 (13) 0.0575 (9)
H12A 0.8357 −0.4334 0.2993 0.069*
C13 0.8247 (4) −0.1489 (5) 0.25529 (12) 0.0487 (8)
H13A 0.9037 −0.1863 0.2332 0.058*

Atomic displacement parameters (Å2)

U11 U22 U33 U12 U13 U23
Cl 0.0763 (6) 0.0643 (6) 0.0401 (5) −0.0168 (4) −0.0063 (4) −0.0024 (4)
O1 0.0783 (17) 0.0571 (14) 0.0470 (14) −0.0243 (12) −0.0099 (11) 0.0075 (11)
N1 0.0454 (14) 0.0396 (14) 0.0428 (14) −0.0047 (11) 0.0083 (11) 0.0038 (11)
C1 0.0463 (17) 0.0399 (16) 0.0381 (15) −0.0066 (13) 0.0039 (12) 0.0038 (13)
O2 0.0900 (18) 0.0517 (14) 0.0564 (15) −0.0300 (13) 0.0034 (12) 0.0098 (11)
N2 0.0598 (16) 0.0443 (14) 0.0329 (13) −0.0182 (12) −0.0011 (11) 0.0030 (11)
C2 0.0477 (18) 0.0470 (17) 0.0368 (16) −0.0028 (14) 0.0005 (12) 0.0010 (13)
O3 0.0651 (14) 0.0470 (12) 0.0369 (11) −0.0183 (11) −0.0002 (9) 0.0031 (9)
C3 0.067 (2) 0.0513 (19) 0.0356 (16) −0.0035 (16) 0.0020 (14) 0.0082 (14)
O4 0.0728 (15) 0.0521 (13) 0.0311 (11) −0.0239 (11) −0.0018 (10) 0.0077 (9)
C4 0.0550 (18) 0.0428 (17) 0.0391 (16) −0.0037 (14) 0.0059 (13) 0.0097 (13)
C5 0.0383 (15) 0.0365 (15) 0.0394 (15) −0.0021 (12) 0.0050 (12) −0.0005 (12)
C6 0.0396 (15) 0.0377 (15) 0.0338 (14) 0.0009 (12) 0.0038 (11) 0.0032 (12)
C7 0.0391 (15) 0.0413 (16) 0.0344 (15) −0.0010 (13) 0.0010 (12) 0.0036 (13)
C8 0.0473 (17) 0.0441 (17) 0.0276 (14) −0.0128 (14) −0.0021 (12) 0.0062 (12)
C9 0.0500 (18) 0.0413 (16) 0.0452 (17) −0.0027 (14) −0.0006 (13) −0.0022 (13)
C10 0.058 (2) 0.067 (2) 0.0403 (17) −0.0212 (18) 0.0119 (14) −0.0078 (16)
C11 0.078 (2) 0.054 (2) 0.0351 (16) −0.0228 (19) −0.0020 (16) 0.0113 (15)
C12 0.071 (2) 0.0434 (19) 0.055 (2) −0.0017 (17) −0.0110 (17) 0.0074 (16)
C13 0.0496 (18) 0.0526 (19) 0.0437 (17) −0.0007 (15) 0.0033 (13) −0.0023 (14)

Geometric parameters (Å, º)

Cl—C2 1.737 (3) O4—C8 1.410 (3)
O1—N1 1.226 (3) C4—C5 1.390 (4)
N1—O2 1.220 (3) C4—H4A 0.9300
N1—C5 1.459 (4) C5—C6 1.415 (4)
C1—C2 1.376 (4) C8—C9 1.372 (4)
C1—C6 1.392 (4) C8—C13 1.374 (4)
C1—H1A 0.9300 C9—C10 1.387 (4)
N2—C7 1.369 (4) C9—H9A 0.9300
N2—C6 1.391 (3) C10—C11 1.382 (5)
N2—H2A 0.8600 C10—H10A 0.9300
C2—C3 1.384 (4) C11—C12 1.360 (5)
O3—C7 1.193 (3) C11—H11A 0.9300
C3—C4 1.363 (4) C12—C13 1.382 (4)
C3—H3A 0.9300 C12—H12A 0.9300
O4—C7 1.354 (3) C13—H13A 0.9300
O2—N1—O1 121.5 (3) N2—C6—C5 120.8 (2)
O2—N1—C5 118.7 (2) C1—C6—C5 117.4 (2)
O1—N1—C5 119.8 (2) O3—C7—O4 125.3 (3)
C2—C1—C6 120.1 (3) O3—C7—N2 128.2 (3)
C2—C1—H1A 119.9 O4—C7—N2 106.6 (2)
C6—C1—H1A 119.9 C9—C8—C13 122.2 (3)
C7—N2—C6 128.3 (2) C9—C8—O4 117.2 (3)
C7—N2—H2A 115.9 C13—C8—O4 120.3 (3)
C6—N2—H2A 115.9 C8—C9—C10 118.2 (3)
C1—C2—C3 122.3 (3) C8—C9—H9A 120.9
C1—C2—Cl 118.9 (2) C10—C9—H9A 120.9
C3—C2—Cl 118.8 (2) C11—C10—C9 120.2 (3)
C4—C3—C2 118.5 (3) C11—C10—H10A 119.9
C4—C3—H3A 120.8 C9—C10—H10A 119.9
C2—C3—H3A 120.8 C12—C11—C10 120.3 (3)
C7—O4—C8 118.8 (2) C12—C11—H11A 119.9
C3—C4—C5 120.8 (3) C10—C11—H11A 119.9
C3—C4—H4A 119.6 C11—C12—C13 120.7 (3)
C5—C4—H4A 119.6 C11—C12—H12A 119.7
C4—C5—C6 120.8 (3) C13—C12—H12A 119.7
C4—C5—N1 116.1 (2) C8—C13—C12 118.5 (3)
C6—C5—N1 123.1 (2) C8—C13—H13A 120.8
N2—C6—C1 121.8 (2) C12—C13—H13A 120.8
C6—C1—C2—C3 −0.9 (5) C4—C5—C6—C1 1.3 (4)
C6—C1—C2—Cl 179.8 (2) N1—C5—C6—C1 −177.7 (3)
C1—C2—C3—C4 1.0 (5) C8—O4—C7—O3 1.5 (4)
Cl—C2—C3—C4 −179.7 (2) C8—O4—C7—N2 −179.5 (2)
C2—C3—C4—C5 0.1 (5) C6—N2—C7—O3 6.6 (5)
C3—C4—C5—C6 −1.3 (5) C6—N2—C7—O4 −172.3 (3)
C3—C4—C5—N1 177.8 (3) C7—O4—C8—C9 −111.0 (3)
O2—N1—C5—C4 5.3 (4) C7—O4—C8—C13 75.8 (3)
O1—N1—C5—C4 −175.2 (3) C13—C8—C9—C10 −0.4 (4)
O2—N1—C5—C6 −175.6 (3) O4—C8—C9—C10 −173.4 (2)
O1—N1—C5—C6 3.9 (4) C8—C9—C10—C11 0.0 (4)
C7—N2—C6—C1 −0.6 (5) C9—C10—C11—C12 0.3 (5)
C7—N2—C6—C5 178.0 (3) C10—C11—C12—C13 −0.1 (5)
C2—C1—C6—N2 178.4 (3) C9—C8—C13—C12 0.5 (4)
C2—C1—C6—C5 −0.2 (4) O4—C8—C13—C12 173.3 (3)
C4—C5—C6—N2 −177.3 (3) C11—C12—C13—C8 −0.2 (5)
N1—C5—C6—N2 3.7 (4)

Hydrogen-bond geometry (Å, º)

D—H···A D—H H···A D···A D—H···A
C4—H4A···O2i 0.93 2.48 3.312 (4) 150
C13—H13A···O1ii 0.93 2.56 3.419 (4) 154

Symmetry codes: (i) −x+2, −y+2, −z; (ii) x, y−1, z.

Footnotes

Supplementary data and figures for this paper are available from the IUCr electronic archives (Reference: JJ2143).

References

  1. Bandgar, B. P., Sarangdhar, R. J., Khan, F., Mookkan, J., Shetty, P. & Singh, G. (2011). J. Med. Chem. 54, 5915–5926. [DOI] [PubMed]
  2. Enraf–Nonius (1994). CAD-4 Software Enraf–Nonius, Delft, The Netherlands.
  3. Harms, K. & Wocadlo, S. (1995). XCAD4 University of Marburg, Germany.
  4. Huynh, H. (2010). Expert Opin. Emerg. Drugs, 15, 13–26. [DOI] [PubMed]
  5. North, A. C. T., Phillips, D. C. & Mathews, F. S. (1968). Acta Cryst. A24, 351–359.
  6. Sheldrick, G. M. (2008). Acta Cryst. A64, 112–122. [DOI] [PubMed]
  7. Zhu, N., Tran, P., Bell, N. & Stevens, C. L. K. (2007). J. Chem. Crystallogr. 37, 670–683.

Associated Data

This section collects any data citations, data availability statements, or supplementary materials included in this article.

Supplementary Materials

Crystal structure: contains datablock(s) global, I. DOI: 10.1107/S1600536812030930/jj2143sup1.cif

e-68-o2547-sup1.cif (21.9KB, cif)

Structure factors: contains datablock(s) I. DOI: 10.1107/S1600536812030930/jj2143Isup2.hkl

e-68-o2547-Isup2.hkl (113.1KB, hkl)

Supplementary material file. DOI: 10.1107/S1600536812030930/jj2143Isup3.cml

Additional supplementary materials: crystallographic information; 3D view; checkCIF report


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