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. 1978 Feb;5(2):549–562. doi: 10.1093/nar/5.2.549

Chemical and conformational changes in chromosome regions being actively transcribed.

M Pagés, C Alonso
PMCID: PMC342001  PMID: 634798

Abstract

U.V. microspectrophotometry has been used to calculate quantities of nucleic acids and proteins of complete polytene chromosomal sets and specific regions of these chromosomes. It has been found that in chromosomes the ratio of DNA to proteins is approximately 1:4. This ratio however changes when specific regions are compared. The average ratio of DNA to proteins in a puffed region (2-48B4C5) increases to 1:16 in contrast to 1:6 from the same region but in non puffed state. At the same time the RNA quantity increases by a factor of 2. thermal denaturation profiles of formaldehyde fixed chromosomes show that the Tm of this region in puffed and non puffed state differ by 10 degrees C. Moreover these profiles suggest that a large fraction of histone-bound DNA is destabilized during puffing.

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Selected References

These references are in PubMed. This may not be the complete list of references from this article.

  1. Baudisch W., Panitz R. Kontrolle eines biochemischen Merkmals in den Speicheldrüsen von Acricotopus lucidus durch einen Balbiani-Ring. Exp Cell Res. 1968 Mar;49(3):470–476. doi: 10.1016/0014-4827(68)90196-1. [DOI] [PubMed] [Google Scholar]
  2. Berendes H. D. Salivary gland function and chromosomal puffing patterns in Drosophila hydei. Chromosoma. 1965;17(1):35–77. doi: 10.1007/BF00285155. [DOI] [PubMed] [Google Scholar]
  3. Berendes H. D. The hormone ecdysone as effector of specific changes in the pattern of gene activities of Drosophila hydei. Chromosoma. 1967;22(3):274–293. doi: 10.1007/BF00319878. [DOI] [PubMed] [Google Scholar]
  4. Boyd J. B., Berendes H. D., Boyd H. Mass preparation of nuclei from the larval salivary glands of Drosophila hydei. J Cell Biol. 1968 Aug;38(2):369–376. doi: 10.1083/jcb.38.2.369. [DOI] [PMC free article] [PubMed] [Google Scholar]
  5. Derksen J. W. Ribonuclear protein formation at locus 2-48 BC in Drosophila hydei. Nature. 1976 Sep 30;263(5576):438–439. doi: 10.1038/263438a0. [DOI] [PubMed] [Google Scholar]
  6. Gorovsky M. A., Woodard J. Histone content of chromosomal loci active and inactive in RNA synthesis. J Cell Biol. 1967 Jun;33(3):723–728. doi: 10.1083/jcb.33.3.723. [DOI] [PMC free article] [PubMed] [Google Scholar]
  7. Gottesfeld J. M., Butler P. J. Structure of transcriptionally-active chromatin subunits. Nucleic Acids Res. 1977 Sep;4(9):3155–3173. doi: 10.1093/nar/4.9.3155. [DOI] [PMC free article] [PubMed] [Google Scholar]
  8. Grossbach U. Chromosomen-Aktivitat und biochemische Zelldifferenzierung in den Speicheldrüsen von Camptochironomus. Chromosoma. 1969;28(2):136–187. doi: 10.1007/BF00331528. [DOI] [PubMed] [Google Scholar]
  9. Holt T. K. Local protein accumulation during gene activation. II. Interferometric measurements of the amount of solid material in temperature induced puffs of Drosophila hydei. Chromosoma. 1971 Mar 16;32(4):428–435. doi: 10.1007/BF00285253. [DOI] [PubMed] [Google Scholar]
  10. Jamrich M., Greenleaf A. L., Bautz E. K. Localization of RNA polymerase in polytene chromosomes of Drosophila melanogaster. Proc Natl Acad Sci U S A. 1977 May;74(5):2079–2083. doi: 10.1073/pnas.74.5.2079. [DOI] [PMC free article] [PubMed] [Google Scholar]
  11. Kernell A. M., Ringertz N. R. Cytochemical characterization of deoxyribonucleoprotein by UV-microspectrophotometry on heat denatured cell nuclei. Exp Cell Res. 1972 May;72(1):240–251. doi: 10.1016/0014-4827(72)90586-1. [DOI] [PubMed] [Google Scholar]
  12. LOWRY O. H., ROSEBROUGH N. J., FARR A. L., RANDALL R. J. Protein measurement with the Folin phenol reagent. J Biol Chem. 1951 Nov;193(1):265–275. [PubMed] [Google Scholar]
  13. Li H. J., Bonner J. Interaction of histone half-molecules with deoxyribonucleic acid. Biochemistry. 1971 Apr 13;10(8):1461–1470. doi: 10.1021/bi00784a030. [DOI] [PubMed] [Google Scholar]
  14. Li H. J. Thermal denaturation of nucleohistones--effects of formaldehyde reaction. Biopolymers. 1972;11(4):835–847. doi: 10.1002/bip.1972.360110408. [DOI] [PubMed] [Google Scholar]
  15. Mayall B. H. Deoxyribonucleic acid cytophotometry of stained human leukocytes. I. Differences among cell types. J Histochem Cytochem. 1969 Apr;17(4):249–257. doi: 10.1177/17.4.249. [DOI] [PubMed] [Google Scholar]
  16. Mulder M. P., van Duijn P., Gloor H. J. The replicative organization of DNA in polytene chromosomes of Drosophila hydei. Genetica. 1968;39(3):385–428. doi: 10.1007/BF02324479. [DOI] [PubMed] [Google Scholar]
  17. PELLING G. Chromosomal synthesis of ribonucleic acid as shown by incorporation of uridine labelled with tritium. Nature. 1959 Aug 22;184(Suppl 9):655–656. doi: 10.1038/184655a0. [DOI] [PubMed] [Google Scholar]
  18. Pagés M., Alonso C. Activity of the endogenous RNA polymerase on fixed polytene chromosomes. Exp Cell Res. 1976 Mar 1;98(1):120–126. doi: 10.1016/0014-4827(76)90470-5. [DOI] [PubMed] [Google Scholar]
  19. Pagés M., Alonso C. Synthesis of RNA containing poly A in third instar salivary glands isolated nuclei. Acta Embryol Exp (Palermo) 1976;(3):355–372. [PubMed] [Google Scholar]
  20. Paul J. S., Mateyko G. M. Quantitative interference microscopy of polytene chromosomes. II. Cytochemical studies via ultramicrospectrophotometry. Exp Cell Res. 1970 Feb;59(2):237–243. doi: 10.1016/0014-4827(70)90596-3. [DOI] [PubMed] [Google Scholar]
  21. Paul J., Gilmour R. S. Organ-specific restriction of transcription in mammalian chromatin. J Mol Biol. 1968 Jul 14;34(2):305–316. doi: 10.1016/0022-2836(68)90255-6. [DOI] [PubMed] [Google Scholar]
  22. Pederson T., Bhorjee J. S. A special class of non-histone protein tightly complexed with template-inactive DNA in chromatin. Biochemistry. 1975 Jul 15;14(14):3238–3242. doi: 10.1021/bi00685a033. [DOI] [PubMed] [Google Scholar]
  23. Silver L. M., Elgin S. C. A method for determination of the in situ distribution of chromosomal proteins. Proc Natl Acad Sci U S A. 1976 Feb;73(2):423–427. doi: 10.1073/pnas.73.2.423. [DOI] [PMC free article] [PubMed] [Google Scholar]
  24. Subirana J. A. Studies on the thermal denaturation of nucleohistones. J Mol Biol. 1973 Mar 5;74(3):363–386. doi: 10.1016/0022-2836(73)90378-1. [DOI] [PubMed] [Google Scholar]
  25. Tissières A., Mitchell H. K., Tracy U. M. Protein synthesis in salivary glands of Drosophila melanogaster: relation to chromosome puffs. J Mol Biol. 1974 Apr 15;84(3):389–398. doi: 10.1016/0022-2836(74)90447-1. [DOI] [PubMed] [Google Scholar]
  26. Weintraub H., Groudine M. Chromosomal subunits in active genes have an altered conformation. Science. 1976 Sep 3;193(4256):848–856. doi: 10.1126/science.948749. [DOI] [PubMed] [Google Scholar]
  27. Yeoman L. C., Taylor C. W., Jordan J. J., Busch H. Differences in chromatin proteins of growing and non-growing tissues. Exp Cell Res. 1975 Mar 1;91(1):207–215. doi: 10.1016/0014-4827(75)90159-7. [DOI] [PubMed] [Google Scholar]

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