Table 1.
Nearest GenBank relatives for each OTUs received in this study
OTU | Length (bp) | Nearest GenBank relative (accession no. of relative) | Location | % Identity | Reference |
---|---|---|---|---|---|
OTU-G11 | 837 | Uncultured magnetococcus sp. clone OTU8 (GQ468509) | Lake Miyun, Beijing, China | 97 | Lin and Pan (2010) |
OTU-J24 | 837 | Uncultured magnetococcus sp. clone OTU8 (GQ468509) | Lake Miyun, Beijing, China | 97 | Lin and Pan (2010) |
OTU-H15 | 837 | Magneticcoccus (CS308, X61607) | Lake Chiemsee, Munich, Germany | 97 | Spring et al. (1992) |
OTU-E3 | 837 | Uncultured magnetococcus sp. clone 17 (EU780677) | Lake Miyun, Beijing, China | 96 | Lin et al. (2009) |
OTU-F20 | 837 | Uncultured magnetococcus sp. clone 17 (EU780677) | Lake Miyun, Beijing, China | 98 | Lin et al. (2009) |
OTU-E15 | 837 | Uncultured magnetococcus sp. clone 17 (EU780677) | Lake Miyun, Beijing, China | 96 | Lin et al. (2009) |
OTU-C9 | 837 | Magnetic coccus (CS103, X61605) | Lake Chiemsee, Munich, Germany | 96 | Spring et al. (1992) |
OTU-E26 | 837 | Uncultured magnetococcus sp. clone OTU29 (GQ468510) | Lake Miyun, Beijing, China | 98 | Lin and Pan (2010) |
OTU-A10 | 837 | Uncultured magnetococcus sp. clone 17 (EU780677) | Lake Miyun, Beijing, China | 95 | Lin et al. (2009) |
OTU-H2 | 838 | Magnetic coccus (CS103, X61605) | Lake Chiemsee, Munich, Germany | 96 | Spring et al. (1992) |
OTU-F30 | 838 | Uncultured magnetococcus sp. clone 17 (EU780677) | Lake Miyun, Beijing, China | 95 | Lin et al. (2009) |
OTU-E29 | 837 | Uncultured magnetococcus sp. clone 17 (EU780677) | Lake Miyun, Beijing, China | 94 | Lin et al. (2009) |
OTU-B20 | 838 | Uncultured magnetococcus sp. clone Y2 (GQ338464) | Lake Miyun, Beijing, China | 95 | Lin and Pan (2009a) |
OTU-J22 | 837 | Uncultured magnetococcus sp. clone XSE-42 (EF379385) | Huiquan bay, Shandong, China | 95 | Pan et al. (2008) |
OTU-C8 | 837 | Uncultured magnetococcus sp. clone OTU13 (GQ468512) | Lake Miyun, Beijing, China | 95 | Lin et al. (2009) |
OTU-L18 | 837 | Magnetic coccus 16S rRNA gene (CS81, X81184) | Lake Chiemsee, Munich, Germany | 98 | Spring et al. (1994) |
OTU-D6 | 836 | Uncultured magnetococcus sp. clone F1 (GQ338449) | Lake Miyun, Beijing, China | 91 | Lin and Pan (2009a) |
OTU-J21 | 837 | Uncultured magnetococcus sp. clone OTU17 (GQ468515) | Lake Miyun, Beijing, China | 98 | Lin et al. (2009) |
OTU-L30 | 836 | Uncultured magnetococcus sp. clone M-67 (EF371491) | Jiaozhou bay, Shandong, China | 92 | Xing et al. (2008) |
OTU-L22 | 836 | Magnetic bacterium small subunit rRNA gene, strain rj58 (Y13211) | Itaipu Lagoon, Rio de Janeiro state, Brazil | 94 | Spring et al. (1998) |
OTU-G15 | 836 | Magnetic bacterium small subunit rRNA gene, strain rj12 (Y13215) | Itaipu Lagoon, Rio de Janeiro state, Brazil | 96 | Spring et al. (1998) |