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. 1978 Nov;5(11):4129–4139. doi: 10.1093/nar/5.11.4129

An Escherichia coli ribonuclease which removes an extra nucleotide from a biosynthetic intermediate of bacteriophage T4 proline transfer RNA.

F J Schmidt, W H McClain
PMCID: PMC342738  PMID: 364422

Abstract

The biosynthesis of bacteriophage T4 tRNAPro, tRNASer, and tRNAIle requires enzymatic removal of extra nucleotides from the 3' terminus of the respective precursor RNAs. A ribonuclease activity capable of catalyzing such reactions has been partially purified from uninfected Escherichia coli using an artificial precursor RNA as substrate. A number of ribonuclease activities were resolved during purification. Use of E. coli strain BN, a mutant known to be deficient in the relevant ribonuclease activity, permitted us to identify it in wild-type cells. This activity was designated the BN ribonuclease. BN ribonuclease had an apparent molecular weight of 35,000 as measured by Sephadex gel filtration. Mg2+ was required for activity, which was optimal at [Mg2+] of 2mM. Activity did not require monovalent cations K+ or Na+. BN ribonuclease was less efficient at removing extra residues in the biosynthesis of tRNASer and tRNAIle than in the biosynthesis of tRNAPro.

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Selected References

These references are in PubMed. This may not be the complete list of references from this article.

  1. Bikoff E. K., LaRue B. F., Gefter M. L. In vitro synthesis of transfer RNA. II. Identification of required enzymatic activities. J Biol Chem. 1975 Aug 25;250(16):6248–6255. [PubMed] [Google Scholar]
  2. Carré D., Chapeville F. Study of the Escherichia coli tRNA nucleotidyltransferase. Specificity of the enzyme for nucleoside triphosphates. Biochimie. 1974;56(11-12):1451–1457. doi: 10.1016/s0300-9084(75)80266-5. [DOI] [PubMed] [Google Scholar]
  3. Ghosh R. K., Deutscher M. P. Identification of an Escherichia coli nuclease acting on structurally altered transfer RNA molecules. J Biol Chem. 1978 Feb 25;253(4):997–1000. [PubMed] [Google Scholar]
  4. Guthrie C. The nucleotide sequence of the dimeric precursor to glutamine and leucine transfer RNAs coded by bacteriophage T4. J Mol Biol. 1975 Jul 15;95(4):529–547. doi: 10.1016/0022-2836(75)90315-0. [DOI] [PubMed] [Google Scholar]
  5. Maisurian A. N., Buyanovskaya E. A. Isolation of an Escherichia coli strain restricting bacteriophage suppressor. Mol Gen Genet. 1973 Feb 2;120(3):227–229. doi: 10.1007/BF00267154. [DOI] [PubMed] [Google Scholar]
  6. McClain W. H., Seidman J. G., Schmidt F. J. Evolution of the biosynthesis of 3'-terminal C-C-A residues in T-even bacteriophage transfer RNAs. J Mol Biol. 1978 Mar 15;119(4):519–536. doi: 10.1016/0022-2836(78)90200-0. [DOI] [PubMed] [Google Scholar]
  7. Robertson H. D., Altman S., Smith J. D. Purification and properties of a specific Escherichia coli ribonuclease which cleaves a tyrosine transfer ribonucleic acid presursor. J Biol Chem. 1972 Aug 25;247(16):5243–5251. [PubMed] [Google Scholar]
  8. Schmidt F. J. A novel function of Escherichia coli transfer RNA nucleotidyltransferase. Biosynthesis of the C-C-A sequence in a phage T4 transfer RNA precursor. J Biol Chem. 1975 Nov 10;250(21):8399–8403. [PubMed] [Google Scholar]
  9. Schmidt F. J., Seidman J. G., Bock R. M. Transfer ribonucleic acid biosynthesis. Substrate specificity of ribonuclease P. J Biol Chem. 1976 Apr 25;251(8):2440–2445. [PubMed] [Google Scholar]
  10. Seidman J. G., Barrell B. G., McClain W. H. Five steps in the conversion of a large precursor RNA into bacteriophage proline and serine transfer RNAs. J Mol Biol. 1975 Dec 25;99(4):733–760. doi: 10.1016/s0022-2836(75)80182-3. [DOI] [PubMed] [Google Scholar]
  11. Seidman J. G., Schmidt F. J., Foss K., McClain W. H. A mutant of escherichia coli defective in removing 3' terminal nucleotides from some transfer RNA precursor molecules. Cell. 1975 Aug;5(4):389–400. doi: 10.1016/0092-8674(75)90058-6. [DOI] [PubMed] [Google Scholar]

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