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. 1976 Oct;3(10):2811–2825. doi: 10.1093/nar/3.10.2811

Interspersion of different repeated sequences in the wheat genome revealed by interspecies DNA/DNA hybridisation.

d b Smith, J Rimpau, R B Flavell
PMCID: PMC343129  PMID: 995651

Abstract

The repeated sequences in oats DNA have been used to study chromosomal repeated sequence organisation in wheat. Approximately 75% of the wheat genome consists of repeated sequences but only approximately 20% will form heteroduplexes with repeated sequences from oats DNA at 60 degrees C in 0.18 M Na+. The proportion of wheat DNA that forms heteroduplexes with oats DNA is shown to be independent of the wheat DNA fragment length. However, the proportion of wheat DNA that is retained with the heteroduplexes when fractionated on hydroxyapatite is very dependent upon the wheat fragment length up to 3500 nucleotides. This is because more non-renatured wheat DNA is attached to the heteroduplexes with longer fragments. The results indicate that the repeated sequences in the wheat genome homologous to repeated sequences in oats are not clustered in the chromosomes but distributed amongst other repeated and possible non-repeated sequences.

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Selected References

These references are in PubMed. This may not be the complete list of references from this article.

  1. BURGI E., HERSHEY A. D. Sedimentation rate as a measure of molecular weight of DNA. Biophys J. 1963 Jul;3:309–321. doi: 10.1016/s0006-3495(63)86823-x. [DOI] [PMC free article] [PubMed] [Google Scholar]
  2. Bendich A. J., McCarthy B. J. DNA Comparisons among Barley, Oats, Rye, and Wheat. Genetics. 1970 Aug;65(4):545–565. doi: 10.1093/genetics/65.4.545. [DOI] [PMC free article] [PubMed] [Google Scholar]
  3. Biro P. A., Carr-Brown A., Southern E. M., Walker P. M. Partial sequence analysis of mouse satellite DNA evidence for short range periodicities. J Mol Biol. 1975 May 5;94(1):71–86. doi: 10.1016/0022-2836(75)90405-2. [DOI] [PubMed] [Google Scholar]
  4. Davidson E. H., Galau G. A., Angerer R. C., Britten R. J. Comparative aspects of DNA organization in Metazoa. Chromosoma. 1975 Jul 21;51(3):253–259. doi: 10.1007/BF00284818. [DOI] [PubMed] [Google Scholar]
  5. Davidson E. H., Graham D. E., Neufeld B. R., Chamberlin M. E., Amenson C. S., Hough B. R., Britten R. J. Arrangement and characterization of repetitive sequence elements in animal DNAs. Cold Spring Harb Symp Quant Biol. 1974;38:295–301. doi: 10.1101/sqb.1974.038.01.033. [DOI] [PubMed] [Google Scholar]
  6. Davidson E. H., Hough B. R., Amenson C. S., Britten R. J. General interspersion of repetitive with non-repetitive sequence elements in the DNA of Xenopus. J Mol Biol. 1973 Jun 15;77(1):1–23. doi: 10.1016/0022-2836(73)90359-8. [DOI] [PubMed] [Google Scholar]
  7. Endow S. A., Polan M. L., Gall J. G. Satellite DNA sequences of Drosophila melanogaster. J Mol Biol. 1975 Aug 25;96(4):665–692. doi: 10.1016/0022-2836(75)90145-x. [DOI] [PubMed] [Google Scholar]
  8. Manning J. E., Schmid C. W., Davidson N. Interspersion of repetitive and nonrepetitive DNA sequences in the Drosophila melanogaster genome. Cell. 1975 Feb;4(2):141–155. doi: 10.1016/0092-8674(75)90121-x. [DOI] [PubMed] [Google Scholar]
  9. Peacock W. J., Brutlag D., Goldring E., Appels R., Hinton C. W., Lindsley D. L. The organization of highly repeated DNA sequences in Drosophila melanogaster chromosomes. Cold Spring Harb Symp Quant Biol. 1974;38:405–416. doi: 10.1101/sqb.1974.038.01.043. [DOI] [PubMed] [Google Scholar]
  10. Rice N. R. Change in repeated DNA in evolution. Brookhaven Symp Biol. 1972;23:44–79. [PubMed] [Google Scholar]
  11. STUDIER F. W. SEDIMENTATION STUDIES OF THE SIZE AND SHAPE OF DNA. J Mol Biol. 1965 Feb;11:373–390. doi: 10.1016/s0022-2836(65)80064-x. [DOI] [PubMed] [Google Scholar]
  12. Smith D. B., Flavell R. B. The relatedness and evolution of repeated nucleotide sequences in the genomes of some Gramineae species. Biochem Genet. 1974 Sep;12(3):243–256. doi: 10.1007/BF00486093. [DOI] [PubMed] [Google Scholar]
  13. Sutton W. D. A crude nuclease preparation suitable for use in DNA reassociation experiments. Biochim Biophys Acta. 1971 Jul 29;240(4):522–531. doi: 10.1016/0005-2787(71)90709-x. [DOI] [PubMed] [Google Scholar]
  14. Wetmur J. G., Davidson N. Kinetics of renaturation of DNA. J Mol Biol. 1968 Feb 14;31(3):349–370. doi: 10.1016/0022-2836(68)90414-2. [DOI] [PubMed] [Google Scholar]
  15. Wilson D. A., Thomas C. A., Jr Hydroxyapatite chromatography of short double-helical DNA. Biochim Biophys Acta. 1973 Dec 21;331(3):333–340. doi: 10.1016/0005-2787(73)90019-1. [DOI] [PubMed] [Google Scholar]
  16. Wilson D. A., Thomas C. A., Jr Palindromes in chromosomes. J Mol Biol. 1974 Mar 25;84(1):115–138. doi: 10.1016/0022-2836(74)90216-2. [DOI] [PubMed] [Google Scholar]

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