Skip to main content
Nucleic Acids Research logoLink to Nucleic Acids Research
. 1976 Nov;3(11):3063–3076. doi: 10.1093/nar/3.11.3063

Repeating restriction fragments of human DNA.

L Manuelidis
PMCID: PMC343151  PMID: 794832

Abstract

Human DNA digested with Hae III showed multiple repeats of a 170 base pair fragment. The most prominent band was the 340 base pair dimer, estimated to be 0.8% of the entire genome. Eco R1 and Hha I yielded fragments with similar electrophoretic mobility to the Hae III dimer. In each case this band was markedly enriched in DNA reassociating at a 0t of less than or equal to 1. Hybridization of the Hae III dimer to gels eluted on to filters demonstrated that the multiple Hae III fragments and Eco R1 fragments contained compatible sequences. These sequences may comprise a distinct subclass of DNA.

Full text

PDF
3063

Images in this article

Selected References

These references are in PubMed. This may not be the complete list of references from this article.

  1. Boyer H. W. Restriction and modification of DNA: enzymes and substrates. Introductory remarks. Fed Proc. 1974 May;33(5):1125–1127. [PubMed] [Google Scholar]
  2. Cooke H. Repeated sequence specific to human males. Nature. 1976 Jul 15;262(5565):182–186. doi: 10.1038/262182a0. [DOI] [PubMed] [Google Scholar]
  3. Corneo G., Ginelli E., Polli E. Renaturation properties and localization in heterochromatin of human satellite DNA's. Biochim Biophys Acta. 1971 Nov 19;247(4):528–534. doi: 10.1016/0005-2787(71)90689-7. [DOI] [PubMed] [Google Scholar]
  4. Denhardt D. T. A membrane-filter technique for the detection of complementary DNA. Biochem Biophys Res Commun. 1966 Jun 13;23(5):641–646. doi: 10.1016/0006-291x(66)90447-5. [DOI] [PubMed] [Google Scholar]
  5. Galibert F., Sedat J., Ziff E. Direct determination of DNA nucleotide sequences: structure of a fragment of bacteriophage phiX172 DNA. J Mol Biol. 1974 Aug 15;87(3):377–407. doi: 10.1016/0022-2836(74)90093-x. [DOI] [PubMed] [Google Scholar]
  6. Gosden J. R., Mitchell A. R. Characterisation of DNA from condensed and dispersed human chromatin. Exp Cell Res. 1975 Apr;92(1):131–137. doi: 10.1016/0014-4827(75)90646-1. [DOI] [PubMed] [Google Scholar]
  7. Henderson A. S., Warburton D., Atwood K. C. Location of ribosomal DNA in the human chromosome complement. Proc Natl Acad Sci U S A. 1972 Nov;69(11):3394–3398. doi: 10.1073/pnas.69.11.3394. [DOI] [PMC free article] [PubMed] [Google Scholar]
  8. Jeanteur P., Attardi G. Relationship between HeLa cell ribosomal RNA and its precursors studied by high resolution RNA-DNA hybridization. J Mol Biol. 1969 Oct 28;45(2):305–324. doi: 10.1016/0022-2836(69)90107-7. [DOI] [PubMed] [Google Scholar]
  9. Ketner G., Kelly T. J., Jr Integrated simian virus 40 sequences in transformed cell DNA: analysis using restriction endonucleases. Proc Natl Acad Sci U S A. 1976 Apr;73(4):1102–1106. doi: 10.1073/pnas.73.4.1102. [DOI] [PMC free article] [PubMed] [Google Scholar]
  10. Maniatis T., Jeffrey A., Kleid D. G. Nucleotide sequence of the rightward operator of phage lambda. Proc Natl Acad Sci U S A. 1975 Mar;72(3):1184–1188. doi: 10.1073/pnas.72.3.1184. [DOI] [PMC free article] [PubMed] [Google Scholar]
  11. Manuelidis L., Manuelidis E. E. Amount of satellite DNA in four experimentally induced tumors of the central nervous system. Quantitative changes in a glioblastoma producing C-type particles. J Natl Cancer Inst. 1976 Jan;56(1):43–50. doi: 10.1093/jnci/56.1.43. [DOI] [PubMed] [Google Scholar]
  12. Middleton J. H., Edgell M. H., Hutchison C. A., 3rd Specific fragments of phi X174 deoxyribonucleic acid produced by a restriction enzyme from Haemophilus aegyptius, endonuclease Z. J Virol. 1972 Jul;10(1):42–50. doi: 10.1128/jvi.10.1.42-50.1972. [DOI] [PMC free article] [PubMed] [Google Scholar]
  13. Moar M. H., Purdom I. F., Jones K. W. Influence of temperature on the detectibility and chromosomal distribution of specific DNA sequences by in situ hybridisation. Chromosoma. 1975 Dec 29;53(4):345–359. doi: 10.1007/BF00294082. [DOI] [PubMed] [Google Scholar]
  14. Mowbray S. L., Gerbi S. A., Landy A. Interdigitated repeated sequences in bovine satellite DNA. Nature. 1975 Jan 31;253(5490):367–370. doi: 10.1038/253367a0. [DOI] [PubMed] [Google Scholar]
  15. Philippsen P., Streeck R. E., Zachau H. G. Defined fragments of calf, human, and rat DNA produced by restriction nucleases. Eur J Biochem. 1974 Jun 15;45(2):479–488. doi: 10.1111/j.1432-1033.1974.tb03573.x. [DOI] [PubMed] [Google Scholar]
  16. Roberts R. J., Myers P. A., Morrison A., Murray K. A specific endonuclease from Haemophilus haemolyticus. J Mol Biol. 1976 May 5;103(1):199–208. doi: 10.1016/0022-2836(76)90060-7. [DOI] [PubMed] [Google Scholar]
  17. Schmid C. W., Deininger P. L. Sequence organization of the human genome. Cell. 1975 Nov;6(3):345–358. doi: 10.1016/0092-8674(75)90184-1. [DOI] [PubMed] [Google Scholar]
  18. Sharp P. A., Sugden B., Sambrook J. Detection of two restriction endonuclease activities in Haemophilus parainfluenzae using analytical agarose--ethidium bromide electrophoresis. Biochemistry. 1973 Jul 31;12(16):3055–3063. doi: 10.1021/bi00740a018. [DOI] [PubMed] [Google Scholar]
  19. Shen C. J., Wiesehahn G., Hearst J. E. Cleavage patterns of Drosophila melanogaster satellite DNA by restriction enzymes. Nucleic Acids Res. 1976 Apr;3(4):931–951. doi: 10.1093/nar/3.4.931. [DOI] [PMC free article] [PubMed] [Google Scholar]
  20. Southern E. M. Detection of specific sequences among DNA fragments separated by gel electrophoresis. J Mol Biol. 1975 Nov 5;98(3):503–517. doi: 10.1016/s0022-2836(75)80083-0. [DOI] [PubMed] [Google Scholar]
  21. Southern E. M. Long range periodicities in mouse satellite DNA. J Mol Biol. 1975 May 5;94(1):51–69. doi: 10.1016/0022-2836(75)90404-0. [DOI] [PubMed] [Google Scholar]
  22. Thuring R. W., Sanders J. P., Borst P. A freeze-squeeze method for recovering long DNA from agarose gels. Anal Biochem. 1975 May 26;66(1):213–220. doi: 10.1016/0003-2697(75)90739-3. [DOI] [PubMed] [Google Scholar]

Articles from Nucleic Acids Research are provided here courtesy of Oxford University Press

RESOURCES