Skip to main content
Nucleic Acids Research logoLink to Nucleic Acids Research
. 1974 Dec;1(12):1713–1720.

The phenylalanine tRNA from Mycoplasma sp. (Kid): a tRNA lacking hypermodified nucleosides functional in protein synthesis

Margaret E Kimball 1, Dieter Söll 1
PMCID: PMC343450  PMID: 4615304

Abstract

Phenylalanine tRNA from Mycoplasma sp. (Kid) was purified and characterized. The tRNA can be aminoacylated by phenylalanyl-tRNA synthetase from both Mycoplasma and E. coli. In a tRNA-dependent cell-free E. coli amino acid incorporating system programmed with poly U pure Mycoplasma tRNAPhe was fully active in promoting phenylalanine incorporation, even in direct competition with homologous E. coli tRNAPhe. Since the Mycoplasma tRNA lacks isopentenyladenosine, or any related hypermodified nucleoside, it appears that the presence of such nucleosides in tRNA is not an absolute requirement for protein synthesis.

Full text

PDF
1713

Selected References

These references are in PubMed. This may not be the complete list of references from this article.

  1. BURGI E., HERSHEY A. D. Sedimentation rate as a measure of molecular weight of DNA. Biophys J. 1963 Jul;3:309–321. doi: 10.1016/s0006-3495(63)86823-x. [DOI] [PMC free article] [PubMed] [Google Scholar]
  2. Cole P. E., Yang S. K., Crothers D. M. Conformational changes of transfer ribonucleic acid. Equilibrium phase diagrams. Biochemistry. 1972 Nov 7;11(23):4358–4368. doi: 10.1021/bi00773a024. [DOI] [PubMed] [Google Scholar]
  3. Feldmann H., Falter H. Transfer ribonucleic acid from Mycoplasma laidlawii A. Eur J Biochem. 1971 Feb;18(4):573–581. doi: 10.1111/j.1432-1033.1971.tb01278.x. [DOI] [PubMed] [Google Scholar]
  4. Furuichi Y., Wataya Y., Hayatsu H., Ukita T. Chemical modification of tRNA-Tyr-yeast with bisulfite. A new method to modify isopentenyladenosine residue. Biochem Biophys Res Commun. 1970 Dec 9;41(5):1185–1191. doi: 10.1016/0006-291x(70)90211-1. [DOI] [PubMed] [Google Scholar]
  5. Gefter M. L., Russell R. L. Role modifications in tyrosine transfer RNA: a modified base affecting ribosome binding. J Mol Biol. 1969 Jan 14;39(1):145–157. doi: 10.1016/0022-2836(69)90339-8. [DOI] [PubMed] [Google Scholar]
  6. Gillam I., Blew D., Warrington R. C., von Tigerstrom M., Tener G. M. A general procedure for the isolation of specific transfer ribonucleic acids. Biochemistry. 1968 Oct;7(10):3459–3468. doi: 10.1021/bi00850a022. [DOI] [PubMed] [Google Scholar]
  7. Hall R. H. N6-(delta 2-isopentenyl)adenosine: chemical reactions, biosynthesis, metabolism, and significance to the structure and function of tRNA. Prog Nucleic Acid Res Mol Biol. 1970;10:57–86. doi: 10.1016/s0079-6603(08)60561-9. [DOI] [PubMed] [Google Scholar]
  8. Hayashi H., Fisher H., Söll D. Transfer ribonucleic acid from Mycoplasma. Biochemistry. 1969 Sep;8(9):3680–3686. doi: 10.1021/bi00837a028. [DOI] [PubMed] [Google Scholar]
  9. Hirsch R., Zachau H. G. Zur Modifizierung serinspezifischer Transfer-Ribonucleinsäure durch Jod. Hoppe Seylers Z Physiol Chem. 1970 May;351(5):563–566. [PubMed] [Google Scholar]
  10. Kimball M. E., Szeto K. S., Soll D. The nucleotide sequence of phenylalanine tRNA from Mycoplasma sp. (Kid). Nucleic Acids Res. 1974 Dec;1(12):1721–1732. [PMC free article] [PubMed] [Google Scholar]
  11. Litwack M. D., Peterkofsky A. Transfer ribonucleic acid deficient in N6-(delta 2-isopentenyl)adenosine due to mevalonic acid limitation. Biochemistry. 1971 Mar 16;10(6):994–1001. doi: 10.1021/bi00782a010. [DOI] [PubMed] [Google Scholar]
  12. Morgan A. R., Wells R. D., Khorana H. G. Studies on polynucleotides, lix. Further codon assignments from amino Acid incorporations directed by ribopolynucleotides containing repeating trinucleotide sequences. Proc Natl Acad Sci U S A. 1966 Dec;56(6):1899–1906. doi: 10.1073/pnas.56.6.1899. [DOI] [PMC free article] [PubMed] [Google Scholar]
  13. Roe B., Michael M., Dudock B. Function of N2 methylguanine in phenylalanine transfer RNA. Nat New Biol. 1973 Dec 5;246(153):135–138. doi: 10.1038/newbio246135a0. [DOI] [PubMed] [Google Scholar]
  14. Szeto K. S., Soll D. Sequence studies of nonradioactive Mycoplasma tRNA Phe with the aid of polynucleotide phosphorylase and polynucleotide kinase. Nucleic Acids Res. 1974 Dec;1(12):1733–1738. doi: 10.1093/nar/1.12.1733. [DOI] [PMC free article] [PubMed] [Google Scholar]
  15. Söll D., Cherayil J. D., Bock R. M. Studies on polynucleotides. LXXV. Specificity of tRNA for codon recognition as studied by the ribosomal binding technique. J Mol Biol. 1967 Oct 14;29(1):97–112. doi: 10.1016/0022-2836(67)90183-0. [DOI] [PubMed] [Google Scholar]
  16. Söll D. Studies on polynucleotides. LXXXV. Partial purification of an amber supressor tRNA and studies on in vitro suppression. J Mol Biol. 1968 May 28;34(1):175–187. doi: 10.1016/0022-2836(68)90243-x. [DOI] [PubMed] [Google Scholar]
  17. White B. N., Tener G. M. Properties of tRNAPhe from Drosophila. Biochim Biophys Acta. 1973 Jun 23;312(2):267–275. doi: 10.1016/0005-2787(73)90372-9. [DOI] [PubMed] [Google Scholar]

Articles from Nucleic Acids Research are provided here courtesy of Oxford University Press

RESOURCES