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. 1975 Sep;2(9):1621–1627. doi: 10.1093/nar/2.9.1621

Single strand conformation of adenylate chains analysed by a specific photoreaction. Determination of structure by 5' residue.

D Pörschke
PMCID: PMC343528  PMID: 1178529

Abstract

The photoreactivity was analysed in various oligo- and polyadenylates: 1) The quantum yields of the specific photoreaction in poly(dA) and dApdA decrease with increasing temperature, whereas the quantum yield of the photodegradation in poly(rA) increases. 2) The photoreactivities of poly(2'MeA) and poly(2'EtA) closely correspond to that of poly(rA). 3) The photodegradation of rApdA is very similar to that of rAprA, whereas dAprA shows the same specific photoreaction as observed for dApdA. These data support the view, that the specific photoreaction observed in oligo(dA) and poly(dA) is dependent upon a specific conformation, which is not accessible to oligo(rA), poly(rA), poly(2'MeA) and poly(2'EtA). The specific conformation is determined by the nucleotide, which carries the internucleotide bond in the 3'-position.

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Selected References

These references are in PubMed. This may not be the complete list of references from this article.

  1. Alderfer J. L., Tazawa I., Tazawa S., Ts'o P. Comparative studies on homopolymers of adenylic acid possessing different C-2' substituents of the furanose. Poly(deoxyriboadenylic acid), poly(riboadenylic acid),poly(2'-O-methyladenylic acid), and poly(2'-O-ethyladenylic acid). Biochemistry. 1974 Apr 9;13(8):1615–1622. doi: 10.1021/bi00705a010. [DOI] [PubMed] [Google Scholar]
  2. Bobst A. M., Rottman F., Cerutti P. A. Effect of the methylation of the 2'-hydroxyl groups in polyadenylic acid on its structure in weakly acidic and neutral solutions and on its capability to form ordered complexes with polyuridylic acid. J Mol Biol. 1969 Dec 14;46(2):221–234. doi: 10.1016/0022-2836(69)90418-5. [DOI] [PubMed] [Google Scholar]
  3. Brahms J., Maurizot J. C., Michelson A. M. Conformational stability of dinucleotides in solution. J Mol Biol. 1967 May 14;25(3):481–495. doi: 10.1016/0022-2836(67)90200-8. [DOI] [PubMed] [Google Scholar]
  4. Khurshid M., Khan A., Rottman F. M. The unique conformational stability of poly-2'-O-ethyladenylic acid. FEBS Lett. 1972 Nov 15;28(1):25–28. doi: 10.1016/0014-5793(72)80668-9. [DOI] [PubMed] [Google Scholar]
  5. Kondo N. S., Fang K. N., Miller P. S., Ts'o P. O. Influence of the furanose on the conformation of adenine dinucleoside monophosphates in solution. Biochemistry. 1972 May 23;11(11):1991–2003. doi: 10.1021/bi00761a001. [DOI] [PubMed] [Google Scholar]
  6. Maurizot J. C., Brahms J., Eckstein F. Forces involved ithe conformational stability of nucleic acids. Nature. 1969 May 10;222(5193):559–561. doi: 10.1038/222559a0. [DOI] [PubMed] [Google Scholar]
  7. Pörschke D. A specific photoreaction in polydeoxyadenylic acid. Proc Natl Acad Sci U S A. 1973 Sep;70(9):2683–2686. doi: 10.1073/pnas.70.9.2683. [DOI] [PMC free article] [PubMed] [Google Scholar]

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