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Acta Crystallographica Section E: Structure Reports Online logoLink to Acta Crystallographica Section E: Structure Reports Online
. 2012 Aug 4;68(Pt 9):m1143. doi: 10.1107/S1600536812033648

Dibromido(6,6′-dimethyl-2,2′-bipyridine-κ2 N,N′)cadmium

Sadif A Shirvan a,*, Sara Haydari Dezfuli a
PMCID: PMC3435573  PMID: 22969446

Abstract

In the title compound, [CdBr2(C12H12N2)], the CdII atom is four-coordinated in a distorted tetra­hedral geometry by two N atoms from a 6,6′-dimethyl-2,2′-bipyridine ligand and two terminal Br atoms. In the crystal, C—H⋯Br hydrogen bonds and π–π stacking inter­actions between the pyridine rings [centroid–centroid distance = 3.763 (5) Å] are present.

Related literature  

For related structures, see: Akbarzadeh Torbati et al. (2010); Alizadeh et al. (2010, 2011); Alizadeh, Kalateh, Ebadi et al. (2009); Alizadeh, Kalateh, Khoshtarkib et al. (2009); Alizadeh, Khoshtarkib et al. (2009); Itoh et al. (2005); Kou et al. (2008); Onggo et al. (2005); Shirvan & Haydari Dezfuli (2012a ,b ).graphic file with name e-68-m1143-scheme1.jpg

Experimental  

Crystal data  

  • [CdBr2(C12H12N2)]

  • M r = 456.45

  • Monoclinic, Inline graphic

  • a = 7.7606 (11) Å

  • b = 10.3832 (17) Å

  • c = 18.184 (2) Å

  • β = 97.460 (11)°

  • V = 1452.8 (4) Å3

  • Z = 4

  • Mo Kα radiation

  • μ = 6.98 mm−1

  • T = 298 K

  • 0.40 × 0.20 × 0.15 mm

Data collection  

  • Bruker APEXII CCD diffractometer

  • Absorption correction: multi-scan (SADABS; Bruker, 2001) T min = 0.054, T max = 0.155

  • 11844 measured reflections

  • 2862 independent reflections

  • 1945 reflections with I > 2σ(I)

  • R int = 0.098

Refinement  

  • R[F 2 > 2σ(F 2)] = 0.047

  • wR(F 2) = 0.124

  • S = 1.03

  • 2862 reflections

  • 154 parameters

  • H-atom parameters constrained

  • Δρmax = 0.61 e Å−3

  • Δρmin = −0.78 e Å−3

Data collection: APEX2 (Bruker, 2007); cell refinement: SAINT (Bruker, 2007); data reduction: SAINT; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008); molecular graphics: ORTEP-3 (Farrugia, 1997) and Mercury (Macrae et al., 2006); software used to prepare material for publication: SHELXTL (Sheldrick, 2008).

Supplementary Material

Crystal structure: contains datablock(s) I, global. DOI: 10.1107/S1600536812033648/hy2576sup1.cif

e-68-m1143-sup1.cif (17.1KB, cif)

Structure factors: contains datablock(s) I. DOI: 10.1107/S1600536812033648/hy2576Isup2.hkl

e-68-m1143-Isup2.hkl (140.5KB, hkl)

Additional supplementary materials: crystallographic information; 3D view; checkCIF report

Table 1. Hydrogen-bond geometry (Å, °).

D—H⋯A D—H H⋯A DA D—H⋯A
C1—H1C⋯Br1i 0.96 2.90 3.848 (10) 171

Symmetry code: (i) Inline graphic.

Acknowledgments

We are grateful to the Islamic Azad University, Omidieh Branch, for financial support.

supplementary crystallographic information

Comment

Recently, we reported the synthesis and crystal structures of [Cd(5,5'-dmbpy)(µ-Br)2]n (Shirvan & Haydari Dezfuli, 2012a) and [CdBr2(4,4'-dmbpy)(DMSO)] (Shirvan & Haydari Dezfuli, 2012b) (5,5'-dmbpy = 5,5'-dimethyl-2,2'-bipyridine, 4,4'-dmbpy = 4,4'-dimethyl-2,2'-bipyridine, DMSO = dimethyl sulfoxide). 6,6'-Dimethyl-2,2'-bipyridine (6,6'-dmbipy) is a good bidentate ligand and numerous complexes with 6,6'-dmbipy have been prepared, such as that of zinc (Alizadeh, Kalateh, Ebadi et al., 2009; Alizadeh, Kalateh, Khoshtarkib et al., 2009; Alizadeh, Khoshtarkib et al., 2009), copper (Itoh et al., 2005), cadmium (Alizadeh et al., 2010), cobalt (Akbarzadeh Torbati et al., 2010), nickel (Kou et al., 2008), ruthenium (Onggo et al., 2005) and mercury (Alizadeh et al., 2011). We report herein the synthesis and crystal structure of the title compound.

In the title compound (Fig. 1), the CdII atom is four-coordinated in a distorted tetrahedral geometry by two N atoms from a 6,6'-dimethyl-2,2'-bipyridine ligand and two terminal Br atoms. The crystal structure is stabilized by intermolecular C—H···Br hydrogen bonds (Table 1) and π–π contacts (Fig. 2) between the pyridine rings, Cg2···Cg3i [symmetry code: (i) -x, 1-y, -z. Cg2 and Cg3 are the centroids of the N1/C2–C6 ring and N2/C7–C11 ring], with a centroid–centroid distance of 3.763 (5) Å.

Experimental

For the preparation of the title compound, a solution of 6,6'-dimethyl-2,2'-bipyridine (0.25 g, 1.33 mmol) in methanol (10 ml) was added to a solution of CdBr2.4H2O (0.46 g, 1.33 mmol) in methanol (10 ml) at room temperature. Crystals suitable for X-ray diffraction experiment were obtained by methanol diffusion into a colorless solution in DMSO after one week (yield: 0.47 g, 77.4%).

Refinement

H atoms were positioned geometrically and refined as riding atoms, with C—H = 0.93 (aromatic) and 0.96 (CH3) Å and with Uiso(H) = 1.2Ueq(C).

Figures

Fig. 1.

Fig. 1.

The molecular structure of the title compound. Displacement ellipsoids are drawn at the 30% probability level.

Fig. 2.

Fig. 2.

Crystal packing diagram of the title compound. Hydrogen bonds are shown as dashed lines.

Crystal data

[CdBr2(C12H12N2)] F(000) = 864
Mr = 456.45 Dx = 2.087 Mg m3
Monoclinic, P21/c Mo Kα radiation, λ = 0.71073 Å
Hall symbol: -P 2ybc Cell parameters from 11844 reflections
a = 7.7606 (11) Å θ = 2.3–26.0°
b = 10.3832 (17) Å µ = 6.98 mm1
c = 18.184 (2) Å T = 298 K
β = 97.460 (11)° Block, colorless
V = 1452.8 (4) Å3 0.40 × 0.20 × 0.15 mm
Z = 4

Data collection

Bruker APEXII CCD diffractometer 2862 independent reflections
Radiation source: fine-focus sealed tube 1945 reflections with I > 2σ(I)
Graphite monochromator Rint = 0.098
φ and ω scans θmax = 26.0°, θmin = 2.3°
Absorption correction: multi-scan (SADABS; Bruker, 2001) h = −9→9
Tmin = 0.054, Tmax = 0.155 k = −12→12
11844 measured reflections l = −19→22

Refinement

Refinement on F2 Primary atom site location: structure-invariant direct methods
Least-squares matrix: full Secondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.047 Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.124 H-atom parameters constrained
S = 1.03 w = 1/[σ2(Fo2) + (0.0602P)2] where P = (Fo2 + 2Fc2)/3
2862 reflections (Δ/σ)max = 0.003
154 parameters Δρmax = 0.61 e Å3
0 restraints Δρmin = −0.78 e Å3

Special details

Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.

Fractional atomic coordinates and isotropic or equivalent isotropic displacement parameters (Å2)

x y z Uiso*/Ueq
C1 0.1386 (14) 0.4345 (10) 0.2292 (5) 0.081 (3)
H1A 0.2494 0.3951 0.2444 0.098*
H1B 0.0530 0.3689 0.2161 0.098*
H1C 0.1055 0.4852 0.2693 0.098*
C2 0.1505 (10) 0.5178 (8) 0.1648 (5) 0.060 (2)
C3 0.1116 (12) 0.6486 (9) 0.1659 (6) 0.077 (3)
H3 0.0782 0.6861 0.2083 0.092*
C4 0.1230 (12) 0.7210 (8) 0.1044 (7) 0.078 (3)
H4 0.0963 0.8083 0.1044 0.094*
C5 0.1750 (11) 0.6642 (8) 0.0409 (6) 0.071 (3)
H5 0.1835 0.7133 −0.0013 0.085*
C6 0.2136 (9) 0.5334 (7) 0.0417 (4) 0.0483 (17)
C7 0.2699 (8) 0.4638 (7) −0.0232 (4) 0.0461 (17)
C8 0.2878 (11) 0.5254 (9) −0.0896 (5) 0.066 (2)
H8 0.2613 0.6124 −0.0958 0.079*
C9 0.3445 (11) 0.4568 (11) −0.1454 (5) 0.072 (3)
H9 0.3569 0.4969 −0.1902 0.087*
C10 0.3835 (11) 0.3288 (11) −0.1359 (5) 0.070 (3)
H10 0.4226 0.2818 −0.1740 0.084*
C11 0.3646 (10) 0.2703 (8) −0.0699 (5) 0.0543 (19)
C12 0.4037 (14) 0.1324 (10) −0.0560 (6) 0.080 (3)
H12A 0.3013 0.0891 −0.0446 0.095*
H12B 0.4944 0.1241 −0.0150 0.095*
H12C 0.4410 0.0945 −0.0995 0.095*
N1 0.1993 (7) 0.4635 (6) 0.1027 (3) 0.0470 (14)
N2 0.3092 (7) 0.3379 (6) −0.0136 (3) 0.0448 (13)
Cd1 0.27194 (7) 0.25065 (5) 0.09801 (3) 0.04813 (18)
Br1 0.01860 (13) 0.10203 (9) 0.10288 (6) 0.0775 (3)
Br2 0.54796 (12) 0.18801 (10) 0.17765 (5) 0.0693 (3)

Atomic displacement parameters (Å2)

U11 U22 U33 U12 U13 U23
C1 0.105 (7) 0.093 (7) 0.049 (5) 0.005 (6) 0.024 (5) −0.017 (5)
C2 0.053 (5) 0.056 (5) 0.069 (6) 0.005 (4) −0.001 (4) −0.020 (4)
C3 0.074 (6) 0.058 (6) 0.095 (8) 0.011 (5) −0.002 (5) −0.019 (5)
C4 0.064 (5) 0.040 (5) 0.123 (9) 0.016 (4) −0.022 (6) −0.027 (5)
C5 0.063 (5) 0.042 (4) 0.099 (7) −0.005 (4) −0.023 (5) 0.011 (5)
C6 0.042 (4) 0.039 (4) 0.060 (5) −0.002 (3) −0.010 (3) 0.004 (3)
C7 0.039 (4) 0.049 (4) 0.048 (4) −0.011 (3) −0.003 (3) 0.011 (3)
C8 0.062 (5) 0.069 (6) 0.066 (6) −0.011 (4) 0.002 (4) 0.023 (5)
C9 0.066 (5) 0.103 (8) 0.048 (5) −0.017 (5) 0.006 (4) 0.020 (5)
C10 0.060 (5) 0.109 (8) 0.042 (4) −0.019 (5) 0.007 (4) −0.003 (5)
C11 0.055 (4) 0.060 (5) 0.048 (4) −0.002 (4) 0.009 (4) −0.005 (4)
C12 0.093 (7) 0.079 (7) 0.067 (6) 0.007 (5) 0.013 (5) −0.019 (5)
N1 0.042 (3) 0.048 (3) 0.051 (4) −0.001 (3) 0.002 (3) −0.007 (3)
N2 0.047 (3) 0.046 (3) 0.041 (3) −0.008 (3) 0.004 (3) 0.001 (3)
Cd1 0.0576 (3) 0.0421 (3) 0.0456 (3) 0.0049 (3) 0.0102 (2) 0.0069 (2)
Br1 0.0804 (6) 0.0631 (6) 0.0900 (7) −0.0163 (5) 0.0155 (5) 0.0197 (5)
Br2 0.0661 (5) 0.0808 (6) 0.0597 (5) 0.0161 (5) 0.0033 (4) 0.0171 (5)

Geometric parameters (Å, º)

C1—C2 1.469 (13) C8—C9 1.358 (14)
C1—H1A 0.9600 C8—H8 0.9300
C1—H1B 0.9600 C9—C10 1.369 (15)
C1—H1C 0.9600 C9—H9 0.9300
C2—N1 1.360 (10) C10—C11 1.369 (12)
C2—C3 1.392 (13) C10—H10 0.9300
C3—C4 1.360 (15) C11—N2 1.357 (10)
C3—H3 0.9300 C11—C12 1.479 (12)
C4—C5 1.402 (14) C12—H12A 0.9600
C4—H4 0.9300 C12—H12B 0.9600
C5—C6 1.390 (11) C12—H12C 0.9600
C5—H5 0.9300 N1—Cd1 2.285 (6)
C6—N1 1.341 (10) N2—Cd1 2.274 (6)
C6—C7 1.498 (11) Cd1—Br1 2.5099 (11)
C7—N2 1.349 (9) Cd1—Br2 2.5106 (11)
C7—C8 1.389 (11)
C2—C1—H1A 109.5 C8—C9—C10 120.1 (8)
C2—C1—H1B 109.5 C8—C9—H9 119.9
H1A—C1—H1B 109.5 C10—C9—H9 119.9
C2—C1—H1C 109.5 C9—C10—C11 119.6 (9)
H1A—C1—H1C 109.5 C9—C10—H10 120.2
H1B—C1—H1C 109.5 C11—C10—H10 120.2
N1—C2—C3 120.1 (9) N2—C11—C10 120.8 (8)
N1—C2—C1 118.2 (7) N2—C11—C12 116.8 (7)
C3—C2—C1 121.8 (9) C10—C11—C12 122.4 (8)
C4—C3—C2 119.3 (10) C11—C12—H12A 109.5
C4—C3—H3 120.3 C11—C12—H12B 109.5
C2—C3—H3 120.3 H12A—C12—H12B 109.5
C3—C4—C5 120.1 (8) C11—C12—H12C 109.5
C3—C4—H4 119.9 H12A—C12—H12C 109.5
C5—C4—H4 119.9 H12B—C12—H12C 109.5
C6—C5—C4 119.1 (9) C6—N1—C2 121.6 (7)
C6—C5—H5 120.5 C6—N1—Cd1 116.5 (5)
C4—C5—H5 120.5 C2—N1—Cd1 121.9 (5)
N1—C6—C5 119.8 (8) C7—N2—C11 119.4 (6)
N1—C6—C7 117.0 (6) C7—N2—Cd1 116.7 (5)
C5—C6—C7 123.1 (8) C11—N2—Cd1 123.8 (5)
N2—C7—C8 120.9 (7) N2—Cd1—N1 73.0 (2)
N2—C7—C6 116.7 (6) N2—Cd1—Br1 117.85 (15)
C8—C7—C6 122.4 (7) N1—Cd1—Br1 113.28 (14)
C9—C8—C7 119.1 (9) N2—Cd1—Br2 114.84 (15)
C9—C8—H8 120.4 N1—Cd1—Br2 115.17 (15)
C7—C8—H8 120.4 Br1—Cd1—Br2 115.72 (4)
N1—C2—C3—C4 0.0 (13) C3—C2—N1—Cd1 178.3 (6)
C1—C2—C3—C4 −179.3 (9) C1—C2—N1—Cd1 −2.4 (10)
C2—C3—C4—C5 −0.6 (15) C8—C7—N2—C11 −0.9 (10)
C3—C4—C5—C6 0.3 (14) C6—C7—N2—C11 −178.6 (7)
C4—C5—C6—N1 0.6 (12) C8—C7—N2—Cd1 −179.7 (5)
C4—C5—C6—C7 179.9 (7) C6—C7—N2—Cd1 2.6 (7)
N1—C6—C7—N2 −3.0 (9) C10—C11—N2—C7 0.9 (11)
C5—C6—C7—N2 177.7 (7) C12—C11—N2—C7 −179.4 (7)
N1—C6—C7—C8 179.3 (7) C10—C11—N2—Cd1 179.7 (6)
C5—C6—C7—C8 0.0 (11) C12—C11—N2—Cd1 −0.6 (10)
N2—C7—C8—C9 0.4 (12) C7—N2—Cd1—N1 −1.2 (4)
C6—C7—C8—C9 178.0 (7) C11—N2—Cd1—N1 180.0 (6)
C7—C8—C9—C10 −0.1 (13) C7—N2—Cd1—Br1 106.6 (4)
C8—C9—C10—C11 0.2 (13) C11—N2—Cd1—Br1 −72.2 (6)
C9—C10—C11—N2 −0.6 (13) C7—N2—Cd1—Br2 −111.6 (4)
C9—C10—C11—C12 179.8 (8) C11—N2—Cd1—Br2 69.6 (6)
C5—C6—N1—C2 −1.2 (11) C6—N1—Cd1—N2 −0.5 (5)
C7—C6—N1—C2 179.4 (6) C2—N1—Cd1—N2 −178.0 (6)
C5—C6—N1—Cd1 −178.8 (5) C6—N1—Cd1—Br1 −114.1 (5)
C7—C6—N1—Cd1 1.9 (8) C2—N1—Cd1—Br1 68.4 (6)
C3—C2—N1—C6 0.9 (11) C6—N1—Cd1—Br2 109.5 (5)
C1—C2—N1—C6 −179.8 (8) C2—N1—Cd1—Br2 −68.0 (5)

Hydrogen-bond geometry (Å, º)

D—H···A D—H H···A D···A D—H···A
C1—H1C···Br1i 0.96 2.90 3.848 (10) 171

Symmetry code: (i) −x, y+1/2, −z+1/2.

Footnotes

Supplementary data and figures for this paper are available from the IUCr electronic archives (Reference: HY2576).

References

  1. Akbarzadeh Torbati, N., Rezvani, A. R., Safari, N., Saravani, H. & Amani, V. (2010). Acta Cryst. E66, m1284. [DOI] [PMC free article] [PubMed]
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Associated Data

This section collects any data citations, data availability statements, or supplementary materials included in this article.

Supplementary Materials

Crystal structure: contains datablock(s) I, global. DOI: 10.1107/S1600536812033648/hy2576sup1.cif

e-68-m1143-sup1.cif (17.1KB, cif)

Structure factors: contains datablock(s) I. DOI: 10.1107/S1600536812033648/hy2576Isup2.hkl

e-68-m1143-Isup2.hkl (140.5KB, hkl)

Additional supplementary materials: crystallographic information; 3D view; checkCIF report


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