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Acta Crystallographica Section E: Structure Reports Online logoLink to Acta Crystallographica Section E: Structure Reports Online
. 2012 Aug 8;68(Pt 9):o2661. doi: 10.1107/S160053681203437X

4-Hy­droxy­benzamide 1,4-dioxane hemisolvate

Srinu Tothadi a, Gautam R Desiraju a,*
PMCID: PMC3435686  PMID: 22969557

Abstract

The asymmetric unit of the title compound, C7H7NO2·0.5C4H8O2, is composed of one 4-hy­droxy­benzamide mol­ecule and half of a 1,4-dioxane mol­ecule. The complete dioxin molecule is generated by crystallographic inversion symmetry. The crystal has an extensive system of hydrogen bonds, in which the three donor H atoms are fully utilized: these result in amide–amide homodimers, and N—H⋯O(dioxane) and O—H⋯O(amide) links.

Related literature  

For the structure and properties of 4-hy­droxy­benzamide and its hydrate, see: Kashino et al. (1991); Perlovich et al. (2007); Hansen et al. (2007).graphic file with name e-68-o2661-scheme1.jpg

Experimental  

Crystal data  

  • C7H7NO2·0.5C4H8O2

  • M r = 181.19

  • Monoclinic, Inline graphic

  • a = 5.4062 (15) Å

  • b = 14.530 (3) Å

  • c = 12.027 (2) Å

  • β = 113.117 (10)°

  • V = 868.9 (3) Å3

  • Z = 4

  • Mo Kα radiation

  • μ = 0.11 mm−1

  • T = 150 K

  • 0.30 × 0.30 × 0.20 mm

Data collection  

  • Rigaku Mercury375R (2x2 bin mode) diffractometer

  • Absorption correction: multi-scan (REQAB; Jacobson, 1998) T min = 0.969, T max = 0.979

  • 9077 measured reflections

  • 1987 independent reflections

  • 1841 reflections with I > 2σ(I)

  • R int = 0.064

Refinement  

  • R[F 2 > 2σ(F 2)] = 0.039

  • wR(F 2) = 0.111

  • S = 1.01

  • 1987 reflections

  • 162 parameters

  • All H-atom parameters refined

  • Δρmax = 0.28 e Å−3

  • Δρmin = −0.22 e Å−3

Data collection: CrystalClear-SM Expert (Rigaku, 2009); cell refinement: CrystalClear-SM Expert; data reduction: CrystalClear-SM Expert; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008); molecular graphics: ORTEP-3 (Farrugia, 1999); software used to prepare material for publication: PLATON (Spek, 2009).

Supplementary Material

Crystal structure: contains datablock(s) global, I. DOI: 10.1107/S160053681203437X/fy2064sup1.cif

e-68-o2661-sup1.cif (21.9KB, cif)

Structure factors: contains datablock(s) I. DOI: 10.1107/S160053681203437X/fy2064Isup2.hkl

e-68-o2661-Isup2.hkl (95.8KB, hkl)

Supplementary material file. DOI: 10.1107/S160053681203437X/fy2064Isup3.cdx

Supplementary material file. DOI: 10.1107/S160053681203437X/fy2064Isup4.cml

Additional supplementary materials: crystallographic information; 3D view; checkCIF report

Table 1. Hydrogen-bond geometry (Å, °).

D—H⋯A D—H H⋯A DA D—H⋯A
N1—H5⋯O1i 0.893 (18) 2.050 (18) 2.9349 (16) 170.8 (16)
N1—H6⋯O3ii 0.895 (19) 2.057 (19) 2.9171 (16) 161 (2)
O2—H9⋯O1iii 0.909 (19) 1.78 (2) 2.6808 (14) 173 (2)

Symmetry codes: (i) Inline graphic; (ii) Inline graphic; (iii) Inline graphic.

Acknowledgments

ST thanks UGC for a SRF and GRD thanks the DST for the award of a J. C. Bose fellowship. The authors thank the Rigaku Corporation, Tokyo, for their support through a generous loan of a Rigaku Mercury375R/M CCD (XtaLAB mini) diffractometer.

supplementary crystallographic information

Comment

Hydroxybenzamides and their derivates are extensively used as starting materials in the synthesis of fine chemicals and agrochemicals (Perlovich et al., 2007). Their physicochemical properties are recurrently studied in environmental and biological systems in descriptions of transport and metabolism. The molecular structure of the title compound is shown in Figure 1. In the solvated crystal, molecules are linked by amide···amide homodimers and other O—H···O and N—H···O synthons. The dioxane molecules form a channel along the a axis. Their position in the channel is stabilized by N—H···O hydrogen-bonded synthons (Figure 2).

Experimental

Crystals of the title compound were obtained by slow evaporation of a saturated solution of 4-hydroxybenzamide in 1,4-dioxane at ambient temperature. Good diffraction quality crystals were obtained after five days.

Refinement

All hydrogen atoms were located from difference Fourier maps and refined isotropically.

Figures

Fig. 1.

Fig. 1.

The structure of title the compound with atom labels and 50% probability displacement ellipsoids.

Fig. 2.

Fig. 2.

O—H···O, N—H···O supramolecular synthons and amide···amide homodimers in the crystal structure.

Crystal data

C7H7NO2·0.5C4H8O2 F(000) = 384
Mr = 181.19 Dx = 1.385 Mg m3
Monoclinic, P21/c Mo Kα radiation, λ = 0.71073 Å
Hall symbol: -P 2ybc Cell parameters from 2599 reflections
a = 5.4062 (15) Å θ = 3.4–27.5°
b = 14.530 (3) Å µ = 0.11 mm1
c = 12.027 (2) Å T = 150 K
β = 113.117 (10)° Block, colourless
V = 868.9 (3) Å3 0.30 × 0.30 × 0.20 mm
Z = 4

Data collection

Rigaku Mercury375R (2x2 bin mode) diffractometer 1987 independent reflections
Radiation source: fine-focus sealed tube 1841 reflections with I > 2σ(I)
Graphite monochromator Rint = 0.064
profile data from ω–scans θmax = 27.5°, θmin = 3.4°
Absorption correction: multi-scan (REQAB; Jacobson, 1998) h = −7→7
Tmin = 0.969, Tmax = 0.979 k = −18→18
9077 measured reflections l = −15→15

Refinement

Refinement on F2 Primary atom site location: structure-invariant direct methods
Least-squares matrix: full Secondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.039 Hydrogen site location: difference Fourier map
wR(F2) = 0.111 All H-atom parameters refined
S = 1.01 w = 1/[σ2(Fo2) + (0.059P)2 + 0.2987P] where P = (Fo2 + 2Fc2)/3
1987 reflections (Δ/σ)max = 0.028
162 parameters Δρmax = 0.28 e Å3
0 restraints Δρmin = −0.22 e Å3

Special details

Geometry. Bond distances, angles etc. have been calculated using the rounded fractional coordinates. All su's are estimated from the variances of the (full) variance-covariance matrix. The cell e.s.d.'s are taken into account in the estimation of distances, angles and torsion angles
Refinement. Refinement on F2 for ALL reflections except those flagged by the user for potential systematic errors. Weighted R-factors wR and all goodnesses of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The observed criterion of F2 > σ(F2) is used only for calculating -R-factor-obs etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R-factors based on ALL data will be even larger.

Fractional atomic coordinates and isotropic or equivalent isotropic displacement parameters (Å2)

x y z Uiso*/Ueq
O1 0.80614 (16) 0.92851 (6) 1.04228 (7) 0.0225 (2)
O2 1.18374 (17) 0.64369 (6) 0.74199 (8) 0.0260 (3)
N1 0.5317 (2) 0.97339 (7) 0.85611 (9) 0.0239 (3)
C1 0.7279 (2) 0.92062 (7) 0.93018 (10) 0.0188 (3)
C2 0.8467 (2) 0.85033 (7) 0.87597 (10) 0.0188 (3)
C3 0.6951 (2) 0.80863 (8) 0.76593 (10) 0.0223 (3)
C4 0.8032 (2) 0.73933 (8) 0.71972 (10) 0.0221 (3)
C5 1.0678 (2) 0.71106 (8) 0.78283 (10) 0.0198 (3)
C6 1.2219 (2) 0.75283 (8) 0.89296 (10) 0.0233 (3)
C7 1.1109 (2) 0.82067 (8) 0.93947 (10) 0.0222 (3)
O3 0.24469 (18) −0.02513 (7) 0.59392 (8) 0.0324 (3)
C8 0.0104 (3) 0.04862 (11) 0.40326 (13) 0.0355 (4)
C9 0.2203 (3) 0.05905 (9) 0.52870 (12) 0.0294 (4)
H5 0.442 (3) 1.0084 (12) 0.8887 (15) 0.033 (4)*
H6 0.481 (4) 0.9703 (13) 0.7759 (17) 0.043 (5)*
H7 1.217 (3) 0.8496 (11) 1.0151 (15) 0.032 (4)*
H8 1.405 (3) 0.7330 (11) 0.9349 (14) 0.032 (4)*
H9 1.060 (4) 0.6223 (13) 0.6709 (17) 0.047 (5)*
H10 0.693 (3) 0.7102 (11) 0.6426 (14) 0.029 (4)*
H11 0.513 (3) 0.8257 (11) 0.7213 (14) 0.030 (4)*
H1 −0.014 (4) 0.1061 (14) 0.3610 (17) 0.052 (5)*
H2 0.071 (4) −0.0023 (14) 0.3589 (16) 0.044 (5)*
H3 0.173 (3) 0.1079 (13) 0.5718 (15) 0.039 (4)*
H4 0.402 (3) 0.0711 (11) 0.5297 (15) 0.033 (4)*

Atomic displacement parameters (Å2)

U11 U22 U33 U12 U13 U23
O1 0.0245 (4) 0.0243 (4) 0.0172 (4) 0.0054 (3) 0.0067 (3) 0.0014 (3)
O2 0.0231 (4) 0.0265 (5) 0.0249 (5) 0.0029 (3) 0.0056 (3) −0.0086 (3)
N1 0.0250 (5) 0.0264 (5) 0.0184 (5) 0.0079 (4) 0.0066 (4) 0.0017 (4)
C1 0.0186 (5) 0.0185 (5) 0.0189 (5) −0.0008 (4) 0.0071 (4) 0.0014 (4)
C2 0.0201 (5) 0.0179 (5) 0.0187 (5) 0.0002 (4) 0.0078 (4) 0.0010 (4)
C3 0.0180 (5) 0.0255 (6) 0.0197 (5) 0.0020 (4) 0.0035 (4) 0.0002 (4)
C4 0.0207 (5) 0.0242 (6) 0.0182 (5) −0.0010 (4) 0.0041 (4) −0.0030 (4)
C5 0.0209 (5) 0.0181 (5) 0.0207 (5) −0.0009 (4) 0.0085 (4) −0.0016 (4)
C6 0.0171 (5) 0.0253 (6) 0.0234 (6) 0.0017 (4) 0.0035 (4) −0.0037 (4)
C7 0.0198 (5) 0.0236 (6) 0.0195 (5) −0.0004 (4) 0.0038 (4) −0.0040 (4)
O3 0.0234 (5) 0.0407 (6) 0.0269 (5) 0.0015 (4) 0.0033 (4) 0.0110 (4)
C8 0.0300 (7) 0.0439 (8) 0.0309 (7) −0.0002 (6) 0.0103 (5) 0.0147 (6)
C9 0.0267 (6) 0.0254 (6) 0.0347 (7) −0.0032 (5) 0.0106 (5) −0.0012 (5)

Geometric parameters (Å, º)

O1—C1 1.2498 (14) C4—C5 1.3923 (17)
O2—C5 1.3543 (15) C5—C6 1.3965 (16)
O2—H9 0.909 (19) C6—C7 1.3814 (17)
O3—C9 1.4309 (17) C3—H11 0.951 (17)
O3—C8i 1.434 (2) C4—H10 0.980 (16)
N1—C1 1.3284 (16) C6—H8 0.962 (17)
N1—H5 0.893 (18) C7—H7 0.961 (17)
N1—H6 0.895 (19) C8—C9 1.498 (2)
C1—C2 1.4864 (16) C8—H1 0.96 (2)
C2—C7 1.3973 (17) C8—H2 1.04 (2)
C2—C3 1.3924 (16) C9—H3 0.971 (18)
C3—C4 1.3854 (17) C9—H4 0.993 (18)
O1···C5ii 3.3571 (17) C9···H4xiv 3.060 (17)
O1···N1iii 2.9349 (16) C9···H6vi 3.033 (19)
O1···C1iv 3.2567 (17) H1···C3xii 2.98 (2)
O1···O2ii 2.6808 (14) H1···C4xii 2.86 (2)
O1···C4ii 3.2448 (17) H2···H3i 2.38 (3)
O2···O1v 2.6808 (14) H2···O2xv 2.69 (2)
O3···O3i 2.8184 (16) H3···H2i 2.38 (3)
O3···N1vi 2.9171 (16) H3···C5xvi 2.964 (18)
O1···H7 2.632 (17) H4···C9xiv 3.060 (17)
O1···H5iii 2.050 (18) H4···H8xvii 2.54 (2)
O1···H10ii 2.544 (16) H4···H4xiv 2.55 (2)
O1···H9ii 1.78 (2) H5···C1iii 2.868 (17)
O2···H2vii 2.69 (2) H5···H5iii 2.51 (2)
O2···H7v 2.806 (17) H5···O1iii 2.050 (18)
O3···H11vi 2.721 (16) H6···C3 2.64 (2)
O3···H6vi 2.057 (19) H6···C9ix 3.033 (19)
N1···C8viii 3.353 (2) H6···H11 2.23 (2)
N1···O3ix 2.9171 (16) H6···C8viii 2.70 (2)
N1···O1iii 2.9349 (16) H6···O3ix 2.057 (19)
N1···H11 2.668 (16) H7···O1 2.632 (17)
C1···O1iv 3.2567 (17) H7···O2ii 2.806 (17)
C1···C1iv 3.5941 (19) H7···H10xviii 2.58 (2)
C1···C6x 3.5589 (19) H7···H9ii 2.38 (3)
C3···C6x 3.5503 (19) H8···H4xix 2.54 (2)
C4···O1v 3.2448 (17) H8···H10xviii 2.51 (2)
C5···O1v 3.3571 (17) H9···O1v 1.78 (2)
C6···C1xi 3.5589 (19) H9···H10 2.27 (3)
C6···C3xi 3.5503 (19) H9···H7v 2.38 (3)
C8···N1viii 3.353 (2) H9···C1v 2.813 (19)
C1···H5iii 2.868 (17) H9···C7v 3.02 (2)
C1···H9ii 2.813 (19) H10···H7xx 2.58 (2)
C3···H1xii 2.98 (2) H10···H8xx 2.51 (2)
C3···H6 2.64 (2) H10···H9 2.27 (3)
C4···H1xii 2.86 (2) H10···O1v 2.544 (16)
C5···H3xiii 2.964 (18) H11···H6 2.23 (2)
C7···H9ii 3.02 (2) H11···O3ix 2.721 (16)
C8···H6viii 2.70 (2) H11···N1 2.668 (16)
C5—O2—H9 108.3 (14) C4—C3—H11 118.0 (10)
C8i—O3—C9 109.51 (11) C5—C4—H10 120.1 (10)
H5—N1—H6 120.9 (17) C3—C4—H10 119.9 (10)
C1—N1—H5 117.6 (11) C5—C6—H8 118.4 (9)
C1—N1—H6 121.3 (14) C7—C6—H8 121.5 (9)
N1—C1—C2 118.11 (10) C2—C7—H7 119.0 (10)
O1—C1—N1 120.89 (10) C6—C7—H7 120.2 (10)
O1—C1—C2 120.98 (10) O3i—C8—C9 110.84 (12)
C1—C2—C7 119.81 (10) O3—C9—C8 109.64 (12)
C3—C2—C7 118.63 (10) C9—C8—H1 109.7 (12)
C1—C2—C3 121.43 (10) C9—C8—H2 108.8 (11)
C2—C3—C4 120.93 (11) H1—C8—H2 110.7 (16)
C3—C4—C5 120.04 (10) O3i—C8—H1 106.6 (14)
O2—C5—C4 122.57 (10) O3i—C8—H2 110.1 (12)
C4—C5—C6 119.44 (11) O3—C9—H3 108.6 (10)
O2—C5—C6 118.00 (10) O3—C9—H4 105.4 (9)
C5—C6—C7 120.13 (11) C8—C9—H3 111.0 (10)
C2—C7—C6 120.80 (10) C8—C9—H4 112.6 (10)
C2—C3—H11 121.1 (10) H3—C9—H4 109.4 (14)
C9—O3—C8i—C9i 58.92 (14) C3—C2—C7—C6 1.44 (17)
C8i—O3—C9—C8 −58.20 (15) C2—C3—C4—C5 −0.65 (18)
N1—C1—C2—C3 −30.42 (16) C3—C4—C5—C6 0.29 (17)
N1—C1—C2—C7 153.69 (11) C3—C4—C5—O2 180.00 (13)
O1—C1—C2—C7 −27.88 (16) O2—C5—C6—C7 −178.77 (11)
O1—C1—C2—C3 148.02 (11) C4—C5—C6—C7 0.93 (17)
C1—C2—C7—C6 177.45 (10) C5—C6—C7—C2 −1.81 (18)
C1—C2—C3—C4 −176.15 (11) O3i—C8—C9—O3 58.99 (16)
C7—C2—C3—C4 −0.21 (17)

Symmetry codes: (i) −x, −y, −z+1; (ii) x, −y+3/2, z+1/2; (iii) −x+1, −y+2, −z+2; (iv) −x+2, −y+2, −z+2; (v) x, −y+3/2, z−1/2; (vi) x, y−1, z; (vii) x+1, −y+1/2, z+1/2; (viii) −x, −y+1, −z+1; (ix) x, y+1, z; (x) x−1, y, z; (xi) x+1, y, z; (xii) −x+1, −y+1, −z+1; (xiii) −x+1, y+1/2, −z+3/2; (xiv) −x+1, −y, −z+1; (xv) x−1, −y+1/2, z−1/2; (xvi) −x+1, y−1/2, −z+3/2; (xvii) −x+2, y−1/2, −z+3/2; (xviii) x+1, −y+3/2, z+1/2; (xix) −x+2, y+1/2, −z+3/2; (xx) x−1, −y+3/2, z−1/2.

Hydrogen-bond geometry (Å, º)

D—H···A D—H H···A D···A D—H···A
N1—H5···O1iii 0.893 (18) 2.050 (18) 2.9349 (16) 170.8 (16)
N1—H6···O3ix 0.895 (19) 2.057 (19) 2.9171 (16) 161 (2)
O2—H9···O1v 0.909 (19) 1.78 (2) 2.6808 (14) 173 (2)

Symmetry codes: (iii) −x+1, −y+2, −z+2; (v) x, −y+3/2, z−1/2; (ix) x, y+1, z.

Footnotes

Supplementary data and figures for this paper are available from the IUCr electronic archives (Reference: FY2064).

References

  1. Farrugia, L. J. (1999). J. Appl. Cryst. 32, 837–838.
  2. Hansen, L. K., Perlovich, G. L. & Bauer-Brandl, A. (2007). Acta Cryst. E63, o2362.
  3. Jacobson, R. (1998). REQAB Private communication to Rigaku Corporation, Tokyo, Japan.
  4. Kashino, S., Tateno, S., Tanabe, H., Haisa, M. & Katsube, Y. (1991). Acta Cryst. C47, 2236–2239.
  5. Perlovich, G. L., Hansen, L. K., Volkova, T. V., Mirza, S., Manin, A. N. & Bauer–Brandl, A. (2007). Cryst. Growth Des. 7, 2643–2648.
  6. Rigaku (2009). CrystalClear-SM Expert Rigaku Corporation, Tokyo, Japan.
  7. Sheldrick, G. M. (2008). Acta Cryst. A64, 112–122. [DOI] [PubMed]
  8. Spek, A. L. (2009). Acta Cryst. D65, 148–155. [DOI] [PMC free article] [PubMed]

Associated Data

This section collects any data citations, data availability statements, or supplementary materials included in this article.

Supplementary Materials

Crystal structure: contains datablock(s) global, I. DOI: 10.1107/S160053681203437X/fy2064sup1.cif

e-68-o2661-sup1.cif (21.9KB, cif)

Structure factors: contains datablock(s) I. DOI: 10.1107/S160053681203437X/fy2064Isup2.hkl

e-68-o2661-Isup2.hkl (95.8KB, hkl)

Supplementary material file. DOI: 10.1107/S160053681203437X/fy2064Isup3.cdx

Supplementary material file. DOI: 10.1107/S160053681203437X/fy2064Isup4.cml

Additional supplementary materials: crystallographic information; 3D view; checkCIF report


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