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Acta Crystallographica Section E: Structure Reports Online logoLink to Acta Crystallographica Section E: Structure Reports Online
. 2012 Aug 23;68(Pt 9):o2747. doi: 10.1107/S1600536812035556

(2S,4S)-3-Benzoyl-4-benzyl-2-tert-but­yl-1,3-oxazolidin-5-one

Victoria J Dungan a, Helge Mueller-Bunz b, Peter J Rutledge a,*
PMCID: PMC3435759  PMID: 22969630

Abstract

In the title compound, C21H23NO3, the central oxazolidinone ring is approximately planar, the maximum deviation from the plane through the central ring being 0.043 (1) Å. The tert-butyl and benzyl substituents are cis to each other and trans to the N-benzoyl group. The inter­planar angle between the aromatic rings of the C-benzyl and N-benzoyl groups is 81.10 (4)°.

Related literature  

For background to this class of compound, see: Seebach & Naef (1981); Seebach et al. (1984); Seebach & Fadel (1985). For applications of these compounds in asymmetric synthesis, see: Krall et al. (2005); Barry & Rutledge (2008); Dungan et al. (2010, 2012). For related structures, see: Dungan et al. (2010); Barry et al. (2012).graphic file with name e-68-o2747-scheme1.jpg

Experimental  

Crystal data  

  • C21H23NO3

  • M r = 337.40

  • Monoclinic, Inline graphic

  • a = 23.6627 (17) Å

  • b = 7.1449 (5) Å

  • c = 12.2265 (9) Å

  • β = 117.470 (1)°

  • V = 1834.0 (2) Å3

  • Z = 4

  • Mo Kα radiation

  • μ = 0.08 mm−1

  • T = 100 K

  • 0.50 × 0.10 × 0.10 mm

Data collection  

  • Bruker D8 platform diffractometer with SMART APEX CCD area detector

  • Absorption correction: multi-scan (SADABS; Sheldrick, 2000) T min = 0.886, T max = 0.992

  • 15833 measured reflections

  • 2390 independent reflections

  • 2335 reflections with I > 2σ(I)

  • R int = 0.019

Refinement  

  • R[F 2 > 2σ(F 2)] = 0.034

  • wR(F 2) = 0.088

  • S = 1.05

  • 2390 reflections

  • 229 parameters

  • 1 restraint

  • H-atom parameters constrained

  • Δρmax = 0.32 e Å−3

  • Δρmin = −0.19 e Å−3

Data collection: SMART (Bruker, 2001); cell refinement: SAINT (Bruker, 2001); data reduction: SAINT; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008); molecular graphics: SHELXTL (Sheldrick, 2008); software used to prepare material for publication: SHELXL97.

Supplementary Material

Crystal structure: contains datablock(s) I, global. DOI: 10.1107/S1600536812035556/kj2203sup1.cif

e-68-o2747-sup1.cif (25.9KB, cif)

Structure factors: contains datablock(s) I. DOI: 10.1107/S1600536812035556/kj2203Isup2.hkl

e-68-o2747-Isup2.hkl (117.5KB, hkl)

Supplementary material file. DOI: 10.1107/S1600536812035556/kj2203Isup3.cdx

Supplementary material file. DOI: 10.1107/S1600536812035556/kj2203Isup4.mol

Supplementary material file. DOI: 10.1107/S1600536812035556/kj2203Isup5.cml

Additional supplementary materials: crystallographic information; 3D view; checkCIF report

Acknowledgments

This work was supported by the University of Sydney and by the School of Chemistry and Chemical Biology and the Centre for Synthesis & Chemical Biology at University College Dublin under the Programme for Research in Third Level Institutions (PRTLI) administered by the HEA.

supplementary crystallographic information

Comment

The stucture of the title compound (2S,4S)-3-benzoyl-4-benzyl-2-(tert-butyl)oxazolidin-5-one is shown below (Fig. 1). This structure reveals that the oxazolidinone ring is approximately planar, with the tert-butyl and benzyl groups occupying the same face of the ring plane. Observation of the cis isomer is in accord with previously reported NMR experiments (Seebach & Fadel, 1985) and the crystal structures of related compounds (Dungan et al. 2010; Barry et al. 2012). In the crystal, the angle between the oxazolidinone ring and the phenyl ring of the N-benzoyl group (C1 to C6) is 65.74 (4)°, while the angle between the oxazolidinone and the phenyl ring of the C-benzyl group (C16 to C21) is 25.66 (7)°.

Oxazolidinones of this type are of interest due to their capacity to undergo stereoselective α-alkylation via the cyclic enolate, a reaction that exploits the principle of "self-reproduction of chirality centres" introduced by Seebach and co-workers (Seebach & Naef, 1981, Seebach et al., 1984, Seebach & Fadel, 1985). Thus the tert-butyl group directs an incoming electrophile to the opposite face of the planar enolate, giving an enantiopure product with retention of stereochemistry from the original oxazolidinone.

We have recently applied this strategy in the synthesis of ligand architectures designed to mimic the structure and function of non-heme iron enzymes (Krall et al. 2005, Barry & Rutledge, 2008, Dungan et al. 2010, Dungan et al. 2012, Barry et al. 2012)

Experimental

The title compound was prepared following the procedure reported by Seebach (Seebach & Fadel, 1985). Thus the sodium salt of L-phenylalanine was condensed with pivalaldehyde, by heating at reflux in pentane overnight under Dean-Stark conditions to affect azeotropic removal of water. The intermediate Schiff base thus formed was treated with benzoyl chloride in dichloromethane at 233 K, prompting cyclization to give the crude product. Recrystallization from methanol gave white needles in a low overall yield (31%).

Refinement

A floating origin restraint was automatically generated by SHELXL. Hydrogen atoms were added at calculated positions and refined using a riding model. Their isotropic displacement parameters were fixed to 1.2 (1.5 for methyl groups) times the equivalent one of the parent atom. C—H bond lengths range from 0.95 Å to 1.00 Å.

Figures

Fig. 1.

Fig. 1.

View of (2S,4S)-3-benzoyl-4-benzyl-2-(tert-butyl)oxazolidin-5-one showing displacement ellipsoids at the 50% probability level. Note the cis arrangement of the tert-butyl and benzyl groups.

Crystal data

C21H23NO3 F(000) = 720
Mr = 337.40 Dx = 1.222 Mg m3
Monoclinic, C2 Mo Kα radiation, λ = 0.71073 Å
Hall symbol: C 2y Cell parameters from 9756 reflections
a = 23.6627 (17) Å θ = 3.0–28.4°
b = 7.1449 (5) Å µ = 0.08 mm1
c = 12.2265 (9) Å T = 100 K
β = 117.470 (1)° Rod, colourless
V = 1834.0 (2) Å3 0.50 × 0.10 × 0.10 mm
Z = 4

Data collection

Bruker D8 platform diffractometer SMART APEX CCD area detector 2390 independent reflections
Radiation source: sealed tube 2335 reflections with I > 2σ(I)
Graphite monochromator Rint = 0.019
Detector resolution: 8.366 pixels mm-1 θmax = 28.5°, θmin = 1.9°
φ and ω scans h = −31→31
Absorption correction: multi-scan (SADABS; Sheldrick, 2000) k = −9→9
Tmin = 0.886, Tmax = 0.992 l = −16→16
15833 measured reflections

Refinement

Refinement on F2 Primary atom site location: structure-invariant direct methods
Least-squares matrix: full Secondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.034 Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.088 H-atom parameters constrained
S = 1.05 w = 1/[σ2(Fo2) + (0.0619P)2 + 0.4977P] where P = (Fo2 + 2Fc2)/3
2390 reflections (Δ/σ)max = 0.005
229 parameters Δρmax = 0.32 e Å3
1 restraint Δρmin = −0.19 e Å3

Special details

Experimental. R(int) for selected reflections was 0.037 before and 0.019 after correction for absorption. The Ratio of minimum to maximum transmission is 0.893567. The λ/2 correction factor is 0.0015. Friedel pairs were merged.
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.

Fractional atomic coordinates and isotropic or equivalent isotropic displacement parameters (Å2)

x y z Uiso*/Ueq
C1 0.32528 (7) 0.0666 (2) 0.72715 (13) 0.0201 (3)
H1 0.2936 0.1615 0.6991 0.024*
C2 0.35910 (8) 0.0255 (3) 0.85255 (14) 0.0238 (3)
H2 0.3504 0.0929 0.9101 0.029*
C3 0.40519 (8) −0.1129 (3) 0.89347 (14) 0.0269 (4)
H3 0.4285 −0.1390 0.9791 0.032*
C4 0.41737 (8) −0.2135 (3) 0.80964 (16) 0.0274 (3)
H4 0.4485 −0.3100 0.8379 0.033*
C5 0.38402 (7) −0.1736 (2) 0.68398 (15) 0.0232 (3)
H5 0.3924 −0.2422 0.6265 0.028*
C6 0.33832 (7) −0.0322 (2) 0.64354 (13) 0.0174 (3)
C7 0.29922 (7) 0.0067 (2) 0.50761 (13) 0.0168 (3)
O1 0.24806 (5) −0.06990 (19) 0.44701 (10) 0.0243 (3)
N 0.32549 (6) 0.12804 (19) 0.45687 (11) 0.0160 (3)
C8 0.28720 (7) 0.1929 (2) 0.32915 (13) 0.0167 (3)
H8 0.2410 0.1878 0.3077 0.020*
C9 0.29772 (7) 0.0885 (2) 0.22984 (13) 0.0186 (3)
C10 0.36825 (7) 0.0743 (3) 0.26437 (15) 0.0248 (3)
H10A 0.3731 0.0156 0.1967 0.037*
H10B 0.3901 −0.0016 0.3391 0.037*
H10C 0.3870 0.2000 0.2795 0.037*
C11 0.26947 (8) −0.1078 (2) 0.21368 (14) 0.0240 (3)
H11A 0.2922 −0.1782 0.2906 0.036*
H11B 0.2738 −0.1725 0.1472 0.036*
H11C 0.2243 −0.0989 0.1928 0.036*
C12 0.26277 (8) 0.1979 (3) 0.10837 (14) 0.0269 (3)
H12A 0.2636 0.1257 0.0410 0.040*
H12B 0.2840 0.3185 0.1158 0.040*
H12C 0.2185 0.2193 0.0910 0.040*
O2 0.30612 (5) 0.38597 (16) 0.33203 (9) 0.0201 (2)
C13 0.35521 (7) 0.4321 (2) 0.44092 (13) 0.0182 (3)
O3 0.38072 (5) 0.58182 (17) 0.45787 (10) 0.0239 (2)
C14 0.37239 (6) 0.2706 (2) 0.53073 (12) 0.0155 (3)
H14 0.3649 0.3077 0.6019 0.019*
C15 0.44249 (6) 0.2112 (2) 0.57882 (13) 0.0179 (3)
H15A 0.4465 0.0764 0.5999 0.022*
H15B 0.4547 0.2281 0.5121 0.022*
C16 0.48839 (6) 0.3203 (2) 0.69091 (13) 0.0171 (3)
C17 0.49970 (7) 0.2615 (3) 0.80782 (14) 0.0239 (3)
H17 0.4764 0.1590 0.8162 0.029*
C18 0.54481 (8) 0.3517 (3) 0.91234 (15) 0.0301 (4)
H18 0.5519 0.3112 0.9917 0.036*
C19 0.57940 (8) 0.4999 (3) 0.90157 (15) 0.0296 (4)
H19 0.6111 0.5588 0.9733 0.035*
C20 0.56771 (8) 0.5622 (3) 0.78598 (16) 0.0293 (4)
H20 0.5910 0.6653 0.7782 0.035*
C21 0.52189 (7) 0.4739 (2) 0.68114 (14) 0.0224 (3)
H21 0.5134 0.5190 0.6019 0.027*

Atomic displacement parameters (Å2)

U11 U22 U33 U12 U13 U23
C1 0.0200 (6) 0.0198 (7) 0.0207 (7) 0.0012 (6) 0.0096 (5) 0.0004 (6)
C2 0.0277 (8) 0.0263 (8) 0.0187 (7) −0.0026 (6) 0.0117 (6) −0.0014 (6)
C3 0.0270 (8) 0.0269 (8) 0.0213 (7) −0.0038 (7) 0.0064 (6) 0.0055 (6)
C4 0.0262 (8) 0.0199 (8) 0.0313 (8) 0.0045 (6) 0.0093 (7) 0.0049 (7)
C5 0.0244 (7) 0.0191 (7) 0.0261 (7) 0.0007 (6) 0.0116 (6) −0.0032 (6)
C6 0.0169 (6) 0.0178 (7) 0.0176 (6) −0.0037 (6) 0.0079 (5) −0.0013 (5)
C7 0.0169 (6) 0.0185 (7) 0.0164 (6) −0.0011 (5) 0.0090 (5) −0.0030 (5)
O1 0.0211 (5) 0.0310 (7) 0.0206 (5) −0.0092 (5) 0.0095 (4) −0.0036 (5)
N 0.0146 (5) 0.0178 (6) 0.0139 (5) −0.0020 (5) 0.0051 (5) −0.0030 (5)
C8 0.0157 (6) 0.0170 (7) 0.0154 (6) −0.0014 (5) 0.0054 (5) −0.0011 (5)
C9 0.0220 (7) 0.0187 (7) 0.0145 (6) −0.0045 (6) 0.0079 (5) −0.0022 (5)
C10 0.0254 (7) 0.0278 (8) 0.0247 (7) −0.0024 (7) 0.0145 (6) −0.0062 (7)
C11 0.0326 (8) 0.0205 (8) 0.0195 (6) −0.0074 (7) 0.0124 (6) −0.0042 (6)
C12 0.0348 (8) 0.0257 (8) 0.0169 (7) −0.0033 (7) 0.0092 (6) 0.0023 (6)
O2 0.0205 (5) 0.0164 (5) 0.0197 (5) −0.0009 (4) 0.0062 (4) −0.0005 (4)
C13 0.0166 (6) 0.0181 (7) 0.0202 (6) 0.0016 (6) 0.0087 (5) −0.0024 (6)
O3 0.0274 (6) 0.0173 (5) 0.0259 (5) −0.0038 (5) 0.0113 (5) −0.0034 (5)
C14 0.0139 (6) 0.0156 (6) 0.0165 (6) −0.0024 (5) 0.0065 (5) −0.0036 (5)
C15 0.0139 (6) 0.0188 (7) 0.0199 (6) −0.0013 (6) 0.0068 (5) −0.0036 (6)
C16 0.0126 (6) 0.0189 (7) 0.0188 (6) 0.0008 (5) 0.0065 (5) −0.0024 (6)
C17 0.0189 (7) 0.0296 (8) 0.0223 (7) 0.0001 (6) 0.0087 (6) 0.0039 (7)
C18 0.0253 (7) 0.0419 (11) 0.0186 (7) 0.0069 (8) 0.0062 (6) 0.0013 (7)
C19 0.0207 (7) 0.0327 (9) 0.0250 (7) 0.0024 (7) 0.0017 (6) −0.0119 (7)
C20 0.0247 (8) 0.0241 (8) 0.0350 (9) −0.0071 (7) 0.0103 (7) −0.0082 (8)
C21 0.0225 (7) 0.0222 (8) 0.0227 (7) −0.0037 (6) 0.0105 (6) −0.0022 (6)

Geometric parameters (Å, º)

C1—C6 1.389 (2) C11—H11A 0.9800
C1—C2 1.395 (2) C11—H11B 0.9800
C1—H1 0.9500 C11—H11C 0.9800
C2—C3 1.384 (2) C12—H12A 0.9800
C2—H2 0.9500 C12—H12B 0.9800
C3—C4 1.387 (3) C12—H12C 0.9800
C3—H3 0.9500 O2—C13 1.3431 (17)
C4—C5 1.395 (2) C13—O3 1.198 (2)
C4—H4 0.9500 C13—C14 1.514 (2)
C5—C6 1.393 (2) C14—C15 1.5418 (18)
C5—H5 0.9500 C14—H14 1.0000
C6—C7 1.5090 (19) C15—C16 1.5141 (19)
C7—O1 1.2194 (18) C15—H15A 0.9900
C7—N 1.3706 (19) C15—H15B 0.9900
N—C14 1.4695 (18) C16—C21 1.391 (2)
N—C8 1.4728 (18) C16—C17 1.392 (2)
C8—O2 1.4455 (19) C17—C18 1.389 (2)
C8—C9 1.540 (2) C17—H17 0.9500
C8—H8 1.0000 C18—C19 1.381 (3)
C9—C10 1.524 (2) C18—H18 0.9500
C9—C11 1.527 (2) C19—C20 1.383 (3)
C9—C12 1.539 (2) C19—H19 0.9500
C10—H10A 0.9800 C20—C21 1.391 (2)
C10—H10B 0.9800 C20—H20 0.9500
C10—H10C 0.9800 C21—H21 0.9500
C6—C1—C2 119.49 (15) H11A—C11—H11B 109.5
C6—C1—H1 120.3 C9—C11—H11C 109.5
C2—C1—H1 120.3 H11A—C11—H11C 109.5
C3—C2—C1 120.32 (15) H11B—C11—H11C 109.5
C3—C2—H2 119.8 C9—C12—H12A 109.5
C1—C2—H2 119.8 C9—C12—H12B 109.5
C2—C3—C4 120.08 (14) H12A—C12—H12B 109.5
C2—C3—H3 120.0 C9—C12—H12C 109.5
C4—C3—H3 120.0 H12A—C12—H12C 109.5
C3—C4—C5 120.20 (15) H12B—C12—H12C 109.5
C3—C4—H4 119.9 C13—O2—C8 112.03 (12)
C5—C4—H4 119.9 O3—C13—O2 121.81 (14)
C6—C5—C4 119.44 (15) O3—C13—C14 127.58 (14)
C6—C5—H5 120.3 O2—C13—C14 110.60 (13)
C4—C5—H5 120.3 N—C14—C13 102.04 (11)
C1—C6—C5 120.46 (14) N—C14—C15 114.74 (12)
C1—C6—C7 119.02 (13) C13—C14—C15 111.59 (12)
C5—C6—C7 120.39 (13) N—C14—H14 109.4
O1—C7—N 122.64 (13) C13—C14—H14 109.4
O1—C7—C6 121.26 (13) C15—C14—H14 109.4
N—C7—C6 116.08 (12) C16—C15—C14 113.58 (12)
C7—N—C14 122.12 (12) C16—C15—H15A 108.9
C7—N—C8 119.56 (12) C14—C15—H15A 108.9
C14—N—C8 110.75 (12) C16—C15—H15B 108.9
O2—C8—N 104.03 (11) C14—C15—H15B 108.9
O2—C8—C9 108.70 (12) H15A—C15—H15B 107.7
N—C8—C9 116.05 (12) C21—C16—C17 118.63 (14)
O2—C8—H8 109.3 C21—C16—C15 121.86 (13)
N—C8—H8 109.3 C17—C16—C15 119.45 (14)
C9—C8—H8 109.3 C18—C17—C16 120.44 (16)
C10—C9—C11 109.45 (14) C18—C17—H17 119.8
C10—C9—C12 109.46 (13) C16—C17—H17 119.8
C11—C9—C12 109.49 (12) C19—C18—C17 120.37 (16)
C10—C9—C8 111.61 (12) C19—C18—H18 119.8
C11—C9—C8 109.08 (12) C17—C18—H18 119.8
C12—C9—C8 107.72 (13) C18—C19—C20 119.76 (16)
C9—C10—H10A 109.5 C18—C19—H19 120.1
C9—C10—H10B 109.5 C20—C19—H19 120.1
H10A—C10—H10B 109.5 C19—C20—C21 119.95 (17)
C9—C10—H10C 109.5 C19—C20—H20 120.0
H10A—C10—H10C 109.5 C21—C20—H20 120.0
H10B—C10—H10C 109.5 C16—C21—C20 120.78 (15)
C9—C11—H11A 109.5 C16—C21—H21 119.6
C9—C11—H11B 109.5 C20—C21—H21 119.6
C6—C1—C2—C3 −0.1 (2) N—C8—C9—C12 −170.29 (12)
C1—C2—C3—C4 −0.9 (3) N—C8—O2—C13 7.13 (15)
C2—C3—C4—C5 1.1 (3) C9—C8—O2—C13 −117.09 (13)
C3—C4—C5—C6 −0.2 (3) C8—O2—C13—O3 174.27 (13)
C2—C1—C6—C5 1.1 (2) C8—O2—C13—C14 −4.26 (16)
C2—C1—C6—C7 177.00 (14) C7—N—C14—C13 −144.40 (13)
C4—C5—C6—C1 −0.9 (2) C8—N—C14—C13 5.00 (14)
C4—C5—C6—C7 −176.77 (15) C7—N—C14—C15 94.76 (16)
C1—C6—C7—O1 −84.5 (2) C8—N—C14—C15 −115.84 (13)
C5—C6—C7—O1 91.41 (19) O3—C13—C14—N −178.96 (14)
C1—C6—C7—N 97.27 (16) O2—C13—C14—N −0.53 (15)
C5—C6—C7—N −86.80 (18) O3—C13—C14—C15 −56.0 (2)
O1—C7—N—C14 156.59 (15) O2—C13—C14—C15 122.48 (13)
C6—C7—N—C14 −25.2 (2) N—C14—C15—C16 −157.45 (12)
O1—C7—N—C8 9.8 (2) C13—C14—C15—C16 87.12 (15)
C6—C7—N—C8 −172.04 (13) C14—C15—C16—C21 −96.99 (16)
C7—N—C8—O2 142.88 (12) C14—C15—C16—C17 85.79 (17)
C14—N—C8—O2 −7.41 (14) C21—C16—C17—C18 −1.7 (2)
C7—N—C8—C9 −97.78 (16) C15—C16—C17—C18 175.60 (15)
C14—N—C8—C9 111.93 (13) C16—C17—C18—C19 −0.6 (3)
O2—C8—C9—C10 66.66 (16) C17—C18—C19—C20 1.9 (3)
N—C8—C9—C10 −50.11 (18) C18—C19—C20—C21 −0.9 (3)
O2—C8—C9—C11 −172.28 (12) C17—C16—C21—C20 2.7 (2)
N—C8—C9—C11 70.95 (15) C15—C16—C21—C20 −174.55 (15)
O2—C8—C9—C12 −53.52 (15) C19—C20—C21—C16 −1.4 (3)

Footnotes

Supplementary data and figures for this paper are available from the IUCr electronic archives (Reference: KJ2203).

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Associated Data

This section collects any data citations, data availability statements, or supplementary materials included in this article.

Supplementary Materials

Crystal structure: contains datablock(s) I, global. DOI: 10.1107/S1600536812035556/kj2203sup1.cif

e-68-o2747-sup1.cif (25.9KB, cif)

Structure factors: contains datablock(s) I. DOI: 10.1107/S1600536812035556/kj2203Isup2.hkl

e-68-o2747-Isup2.hkl (117.5KB, hkl)

Supplementary material file. DOI: 10.1107/S1600536812035556/kj2203Isup3.cdx

Supplementary material file. DOI: 10.1107/S1600536812035556/kj2203Isup4.mol

Supplementary material file. DOI: 10.1107/S1600536812035556/kj2203Isup5.cml

Additional supplementary materials: crystallographic information; 3D view; checkCIF report


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