Abstract
The nucleotide sequences of tobacco chloroplast genes for tRNAGly (UCC) and tRNAArg (UCU) have been determined. The tRNAGly gene has a 691-base-pair intron located in the D stem while the tRNAArg gene does not have any intron. The tRNAGly and tRNAArg genes are encoded on the same strand and separated by a 169-base-pair spacer. The tRNAGly gene is transcribed as a 900-base precursor RNA molecule. The tRNAGly and tRNAArg deduced from the DNA sequences show 84% and 55% sequence homologies with Escherichia coli tRNAGly (UCC) and phage T4 tRNAArg (UCU), respectively.
Keywords: molecular cloning, precursor RNA, nuclease S1 mapping, open reading frame
Full text
PDFImages in this article
Selected References
These references are in PubMed. This may not be the complete list of references from this article.
- Deno H., Kato A., Shinozaki K., Sugiura M. Nucleotide sequences of tobacco chloroplast genes for elongator tRNAMet and tRNAVal (UAC): the tRNAVal (UAC) gene contains a long intron. Nucleic Acids Res. 1982 Dec 11;10(23):7511–7520. doi: 10.1093/nar/10.23.7511. [DOI] [PMC free article] [PubMed] [Google Scholar]
- Deno H., Shinozaki K., Sugiura M. Nucleotide sequence of tobacco chloroplast gene for the alpha subunit of proton-translocating ATPase. Nucleic Acids Res. 1983 Apr 11;11(7):2185–2191. doi: 10.1093/nar/11.7.2185. [DOI] [PMC free article] [PubMed] [Google Scholar]
- Gauss D. H., Sprinzl M. Compilation of sequences of tRNA genes. Nucleic Acids Res. 1983 Jan 11;11(1):r55–103. [PMC free article] [PubMed] [Google Scholar]
- Gauss D. H., Sprinzl M. Compilation of tRNA sequences. Nucleic Acids Res. 1983 Jan 11;11(1):r1–53. [PMC free article] [PubMed] [Google Scholar]
- Goodman H. M., Olson M. V., Hall B. D. Nucleotide sequence of a mutant eukaryotic gene: the yeast tyrosine-inserting ochre suppressor SUP4-o. Proc Natl Acad Sci U S A. 1977 Dec;74(12):5453–5457. doi: 10.1073/pnas.74.12.5453. [DOI] [PMC free article] [PubMed] [Google Scholar]
- Kato A., Shimada H., Kusuda M., Sugiura M. The nucleotide sequences of two tRNAAsn genes from tobacco chloroplasts. Nucleic Acids Res. 1981 Nov 11;9(21):5601–5607. doi: 10.1093/nar/9.21.5601. [DOI] [PMC free article] [PubMed] [Google Scholar]
- Koch W., Edwards K., Kössel H. Sequencing of the 16S-23S spacer in a ribosomal RNA operon of Zea mays chloroplast DNA reveals two split tRNA genes. Cell. 1981 Jul;25(1):203–213. doi: 10.1016/0092-8674(81)90245-2. [DOI] [PubMed] [Google Scholar]
- Maxam A. M., Gilbert W. A new method for sequencing DNA. Proc Natl Acad Sci U S A. 1977 Feb;74(2):560–564. doi: 10.1073/pnas.74.2.560. [DOI] [PMC free article] [PubMed] [Google Scholar]
- Orozco E. M., Jr, Hallick R. B. Euglena gracilis chloroplast transfer RNA transcription units. II. Nucleotide sequence analysis of a tRNAVal-tRNAAsn-tRNAArg-tRNALeu gene cluster. J Biol Chem. 1982 Mar 25;257(6):3265–3275. [PubMed] [Google Scholar]
- Paddock G., Abelson J. Sequence of T4, T2 and T6 bacteriophage species I RNA and specific cleavage by an E. coli endonuclease. Nat New Biol. 1973 Nov 7;246(149):2–6. doi: 10.1038/newbio246002a0. [DOI] [PubMed] [Google Scholar]
- Schwarz Z., Kössel H., Schwarz E., Bogorad L. A gene coding for tRNA is located near 5' terminus of 16S rRNA gene in Zea mays chloroplast genome. Proc Natl Acad Sci U S A. 1981 Aug;78(8):4748–4752. doi: 10.1073/pnas.78.8.4748. [DOI] [PMC free article] [PubMed] [Google Scholar]
- Shinozaki K., Deno H., Kato A., Sugiura M. Overlap and cotranscription of the genes for the beta and epsilon subunits of tobacco chloroplast ATPase. Gene. 1983 Oct;24(2-3):147–155. doi: 10.1016/0378-1119(83)90074-4. [DOI] [PubMed] [Google Scholar]
- Shinozaki K., Sugiura M. Sequence of the intercistronic region between the ribulose-1, 5-bisphosphate carboxylase/oxygenase large subunit and coupling factor beta subunit gene. Nucleic Acids Res. 1982 Aug 25;10(16):4923–4934. doi: 10.1093/nar/10.16.4923. [DOI] [PMC free article] [PubMed] [Google Scholar]
- Shinozaki K., Sugiura M. The nucleotide sequence of the tobacco chloroplast gene for the large subunit of ribulose-1,5-bisphosphate carboxylase/oxygenase. Gene. 1982 Nov;20(1):91–102. doi: 10.1016/0378-1119(82)90090-7. [DOI] [PubMed] [Google Scholar]
- Steinmetz A., Gubbins E. J., Bogorad L. The anticodon of the maize chloroplast gene for tRNA Leu UAA is split by a large intron. Nucleic Acids Res. 1982 May 25;10(10):3027–3037. doi: 10.1093/nar/10.10.3027. [DOI] [PMC free article] [PubMed] [Google Scholar]
- Takaiwa F., Sugiura M. Nucleotide sequence of the 16S - 23S spacer region in an rRNA gene cluster from tobacco chloroplast DNA. Nucleic Acids Res. 1982 Apr 24;10(8):2665–2676. doi: 10.1093/nar/10.8.2665. [DOI] [PMC free article] [PubMed] [Google Scholar]
- Tohdoh N., Shinozaki K., Sugiura M. Sequence of a putative promoter region for the rRNA genes of tobacco chloroplast DNA. Nucleic Acids Res. 1981 Oct 24;9(20):5399–5406. doi: 10.1093/nar/9.20.5399. [DOI] [PMC free article] [PubMed] [Google Scholar]