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. 1984 Apr;81(7):1951–1955. doi: 10.1073/pnas.81.7.1951

Purification of cowpea mosaic virus RNA replication complex: Identification of a virus-encoded 110,000-dalton polypeptide responsible for RNA chain elongation

Lambert Dorssers 1,*, Sander van der Krol 1, Jos van der Meer 1, Albert van Kammen 1, Pim Zabel 1,
PMCID: PMC345414  PMID: 16593443

Abstract

An endogenous cowpea mosaic virus (CPMV) RNA-protein complex (CPMV replication complex) capable of elongating in vitro preexisting nascent chains to full-length viral RNAs has been solubilized from the membrane fraction of CPMV-infected cowpea leaves using Triton X-100 and purified by Sepharose 2B chromatography and glycerol gradient centrifugation in the presence of Triton X-100. Analysis of the polypeptide composition of the complex by NaDod-SO4/PAGE and silver staining revealed major polypeptides with molecular masses of 110, 68, and 57 kilodaltons (kDa), among which the 110-kDa polypeptide was consistently found to cosediment precisely with the RNA polymerase activity. Using antisera to specific viral proteins, we found the 110-kDa polypeptide to be the only known viral polypeptide associated with the RNA replication complex, the 68- and 57-kDa polypeptides being most probably host-specific. The host-encoded 130-kDa monomeric RNA-dependent RNA polymerase, which is known to be stimulated in CPMV-infected cowpea leaves, did not copurify with the virus-specific RNA polymerase complex. Our results dispute the hypothesis that plant viral RNA replication may be mediated by the RNA-dependent RNA polymerase of uninfected plants. We tentatively conclude that the 110-kDa polypeptide encoded by the bottom component RNA of CPMV constitutes the core of the CPMV RNA replication complex.

Keywords: RNA-dependent RNA polymerase (RNA replicase), plant virus RNA replication, RNA-protein complex, immunological blotting, virus-specific antibody

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Selected References

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  1. Baron M. H., Baltimore D. In vitro copying of viral positive strand RNA by poliovirus replicase. Characterization of the reaction and its products. J Biol Chem. 1982 Oct 25;257(20):12359–12366. [PubMed] [Google Scholar]
  2. Baron M. H., Baltimore D. Purification and properties of a host cell protein required for poliovirus replication in vitro. J Biol Chem. 1982 Oct 25;257(20):12351–12358. [PubMed] [Google Scholar]
  3. Dasgupta A. Purification of host factor required for in vitro transcription of poliovirus RNA. Virology. 1983 Jul 15;128(1):245–251. doi: 10.1016/0042-6822(83)90335-5. [DOI] [PubMed] [Google Scholar]
  4. Dasgupta A., Zabel P., Baltimore D. Dependence of the activity of the poliovirus replicase on the host cell protein. Cell. 1980 Feb;19(2):423–429. doi: 10.1016/0092-8674(80)90516-4. [DOI] [PubMed] [Google Scholar]
  5. Duda C. T. Synthesis of double-stranded RNA. II. Partial purification and characterization of an RNA-dependent RNA polymerase in healthy tobacco leaves. Virology. 1979 Jan 15;92(1):180–189. doi: 10.1016/0042-6822(79)90223-x. [DOI] [PubMed] [Google Scholar]
  6. Erickson P. F., Minier L. N., Lasher R. S. Quantitative electrophoretic transfer of polypeptides from SDS polyacrylamide gels to nitrocellulose sheets: a method for their re-use in immunoautoradiographic detection of antigens. J Immunol Methods. 1982 Jun 11;51(2):241–249. doi: 10.1016/0022-1759(82)90263-0. [DOI] [PubMed] [Google Scholar]
  7. Etchison D., Ehrenfeld E. Viral polypeptides associated with the RNA replication complex in poliovirus-infected cells. Virology. 1980 Nov;107(1):135–142. doi: 10.1016/0042-6822(80)90279-2. [DOI] [PubMed] [Google Scholar]
  8. Flanegan J. B., Baltimore D. Poliovirus polyuridylic acid polymerase and RNA replicase have the same viral polypeptide. J Virol. 1979 Jan;29(1):352–360. doi: 10.1128/jvi.29.1.352-360.1979. [DOI] [PMC free article] [PubMed] [Google Scholar]
  9. Fraenkel-Conrat H. RNA-dependent RNA polymerases of plants. Proc Natl Acad Sci U S A. 1983 Jan;80(2):422–424. doi: 10.1073/pnas.80.2.422. [DOI] [PMC free article] [PubMed] [Google Scholar]
  10. Franssen H., Goldbach R., Broekhuijsen M., Moerman M., van Kammen A. Expression of Middle-Component RNA of Cowpea Mosaic Virus: In Vitro Generation of a Precursor to Both Capsid Proteins by a Bottom-Component RNA-Encoded Protease from Infected Cells. J Virol. 1982 Jan;41(1):8–17. doi: 10.1128/jvi.41.1.8-17.1982. [DOI] [PMC free article] [PubMed] [Google Scholar]
  11. Goldbach R., Rezelman G. Orientation of the cleavage map of the 200-kilodalton polypeptide encoded by the bottom-component RNA of cowpea mosaic virus. J Virol. 1983 May;46(2):614–619. doi: 10.1128/jvi.46.2.614-619.1983. [DOI] [PMC free article] [PubMed] [Google Scholar]
  12. Ikegami M., Fraenkel-Conrat H. RNA-dependent RNA polymerase of tobacco plants. Proc Natl Acad Sci U S A. 1978 May;75(5):2122–2124. doi: 10.1073/pnas.75.5.2122. [DOI] [PMC free article] [PubMed] [Google Scholar]
  13. Irie S., Sezaki M., Kato Y. A faithful double stain of proteins in the polyacrylamide gels with Coomassie blue and silver. Anal Biochem. 1982 Nov 1;126(2):350–354. doi: 10.1016/0003-2697(82)90526-7. [DOI] [PubMed] [Google Scholar]
  14. Lowe P. A., Brown F. Isolation of a soluble and template-dependent foot-and-mouth disease virus RNA polymerase. Virology. 1981 May;111(1):23–32. doi: 10.1016/0042-6822(81)90650-4. [DOI] [PubMed] [Google Scholar]
  15. Lundquist R. E., Ehrenfeld E., Maizel J. V., Jr Isolation of a viral polypeptide associated with poliovirus RNA polymerase. Proc Natl Acad Sci U S A. 1974 Dec;71(12):4773–4777. doi: 10.1073/pnas.71.12.4773. [DOI] [PMC free article] [PubMed] [Google Scholar]
  16. Morrissey J. H. Silver stain for proteins in polyacrylamide gels: a modified procedure with enhanced uniform sensitivity. Anal Biochem. 1981 Nov 1;117(2):307–310. doi: 10.1016/0003-2697(81)90783-1. [DOI] [PubMed] [Google Scholar]
  17. Polatnick J., Wool S. Characterization of a 70S polyuridylic acid polymerase isolated from foot-and-mouth disease virus-infected cells. J Virol. 1981 Dec;40(3):881–889. doi: 10.1128/jvi.40.3.881-889.1981. [DOI] [PMC free article] [PubMed] [Google Scholar]
  18. Romaine C. P., Zaitlin M. RNA-dependent RNA polymerases in uninfected and tobacco mosaic virus-infected tabacco leaves: viral induced stimulation of a host polymerase activity. Virology. 1978 May 1;86(1):241–253. doi: 10.1016/0042-6822(78)90024-7. [DOI] [PubMed] [Google Scholar]
  19. Somerville L. L., Wang K. The ultrasensitive silver "protein" stain also detects nanograms of nucleic acids. Biochem Biophys Res Commun. 1981 Sep 16;102(1):53–58. doi: 10.1016/0006-291x(81)91487-x. [DOI] [PubMed] [Google Scholar]
  20. Takanami Y., Fraenkel-Conrat H. Comparative studies on ribonucleic acid dependent RNA polymerases in cucumber mosaic virus infected cucumber and tobacco and uninfected tobacco plants. Biochemistry. 1982 Jun 22;21(13):3161–3167. doi: 10.1021/bi00256a020. [DOI] [PubMed] [Google Scholar]
  21. Tasheva B., Dessev G. Artifacts in sodium dodecyl sulfate-polyacrylamide gel electrophoresis due to 2-mercaptoethanol. Anal Biochem. 1983 Feb 15;129(1):98–102. doi: 10.1016/0003-2697(83)90057-x. [DOI] [PubMed] [Google Scholar]
  22. Van Dyke T. A., Flanegan J. B. Identification of poliovirus polypeptide P63 as a soluble RNA-dependent RNA polymerase. J Virol. 1980 Sep;35(3):732–740. doi: 10.1128/jvi.35.3.732-740.1980. [DOI] [PMC free article] [PubMed] [Google Scholar]
  23. Van Dyke T. A., Rickles R. J., Flanegan J. B. Genome-length copies of poliovirion RNA are synthesized in vitro by the poliovirus RNA-dependent RNA polymerase. J Biol Chem. 1982 Apr 25;257(8):4610–4617. [PubMed] [Google Scholar]
  24. Wimmer E. Genome-linked proteins of viruses. Cell. 1982 Feb;28(2):199–201. doi: 10.1016/0092-8674(82)90335-x. [DOI] [PubMed] [Google Scholar]
  25. Zabel P., Moerman M., van Straaten F., Goldbach R., van Kammen A. Antibodies Against the Genome-Linked Protein VPg of Cowpea Mosaic Virus Recognize a 60,000-Dalton Precursor Polypeptide. J Virol. 1982 Mar;41(3):1083–1088. doi: 10.1128/jvi.41.3.1083-1088.1982. [DOI] [PMC free article] [PubMed] [Google Scholar]
  26. van der Meer J., Dorssers L., Zabel P. Antibody-linked polymerase assay on protein blots: a novel method for identifying polymerases following SDS-polyacrylamide gel electrophoresis. EMBO J. 1983;2(2):233–237. doi: 10.1002/j.1460-2075.1983.tb01411.x. [DOI] [PMC free article] [PubMed] [Google Scholar]

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