Actin-capping protein induced stable microtubules in an mDia1-dependent manner and inhibited the translocation of mDia on the ends of growing actin filaments. Knockdown of capping protein by small interfering RNA reduced stable microtubule levels in proliferating cells and in starved cells stimulated with lysophosphatidic acid.
Abstract
In migrating fibroblasts, RhoA and its effector mDia1 regulate the selective stabilization of microtubules (MTs) polarized in the direction of migration. The conserved formin homology 2 domain of mDia1 is involved both in actin polymerization and MT stabilization, and the relationship between these two activities is unknown. We found that latrunculin A (LatA) and jasplakinolide, actin drugs that release mDia1 from actin filament barbed ends, stimulated stable MT formation in serum-starved fibroblasts and caused a redistribution of mDia1 onto MTs. Knockdown of mDia1 by small interfering RNA (siRNA) prevented stable MT induction by LatA, whereas blocking upstream Rho or integrin signaling had no effect. In search of physiological regulators of mDia1, we found that actin-capping protein induced stable MTs in an mDia1-dependent manner and inhibited the translocation of mDia on the ends of growing actin filaments. Knockdown of capping protein by siRNA reduced stable MT levels in proliferating cells and in starved cells stimulated with lysophosphatidic acid. These results show that actin-capping protein is a novel regulator of MT stability that functions by antagonizing mDia1 activity toward actin filaments and suggest a novel form of actin–MT cross-talk in which a single factor acts sequentially on actin and MTs.
INTRODUCTION
Establishment of polarity in many migrating cells requires the selective capture and stabilization of a subset of microtubules (MTs) oriented toward the leading edge (Gundersen and Bulinski, 1988; Gundersen et al., 2004; Li and Gundersen, 2008). This mechanism ensures that vesicular traffic is spatially biased because the accumulation of posttranslational modifications on these MTs as a result of their longevity (Gundersen et al., 1987; Webster et al., 1987; Khawaja et al., 1988) enhances the interaction of MTs with specific motors and cargoes (Gurland and Gundersen, 1995; Kreitzer et al., 1999; Lin et al., 2002; Reed et al., 2006; Dunn et al., 2008). A distinguishing property of most selectively stabilized MTs is the posttranslational detyrosination of the C-terminal tail of the α-tubulin subunit, which leaves a new C-terminal residue of glutamate exposed. This class of stable MTs has been referred to as Glu MTs to indicate the new C-terminal residue as opposed to dynamic tyrosinated or Tyr MTs (Gundersen et al., 1984). Stable Glu MTs may arise by a capping activity working on the plus ends of the MTs; such MTs neither incorporate nor lose tubulin subunits for extended intervals in vivo (Webster et al., 1987; Infante et al., 2000).
Stable posttranslationally modified MTs are regulated by a RhoA signaling pathway that involves the formin mDia1 and the MT+TIP proteins adenomatous polyposis coli (APC) and EB1 (Cook et al., 1998; Palazzo et al., 2001; Wen et al., 2004; Goulimari et al., 2005). mDia, EB1, and APC bind to one another at independent sites and may form a complex that contributes to capping of the MTs (Wen et al., 2004). mDia1 may also indirectly affect MT stability, as it is necessary for the protein kinase C–dependent phosphorylation of GSK3β, a known negative regulator of MT stability (Eng et al., 2006). Formin homology 2 (FH2)-containing fragments of mDia1, mDia2, and mDia3 also directly bind and stabilize MTs in vitro, and this activity may contribute to their ability to stabilize MTs in cells (Bartolini et al., 2008; Cheng et al., 2011; Gaillard et al., 2011).
mDia1 is a diaphanous-related formin (DRF) that nucleates and elongates actin filaments and also promotes the formation of stable Glu MTs. In DRFs, the FH2 domain nucleates and elongates actin filaments at barbed ends in conjunction with the formin homology 1 (FH1) domain, which recruits profilin-bound G-actin (Goode and Eck, 2007). An intramolecular interaction between N-terminus diaphanous inhibitory domain (DID) and C-terminus diaphanous autoregulatory domain (DAD) domains maintains the molecule in an inactive state. The binding of active GTP-Rho to the formin GTPase binding domain (GBD) has been shown to partially unleash this autoinhibition, thus allowing for actin assembly by the FH domains. Release of autoinhibition also appears to regulate MT stabilization, as only expressions of mDia1 and mDia2 fragments lacking the GBD and/or their DAD regions induce MT stability, and expression of the DAD domain alone induces MT stability in serum-starved NIH 3T3 fibroblasts (Palazzo et al., 2001; Wen et al., 2004; Goulimari et al., 2005).
Notably, the actin and MT activities of mDia can be separated. FH2 fragments of mDia2 and mDia3 containing point mutations that prevent stimulation of actin polymerization are still capable of inducing MT stability when introduced into cells (Bartolini et al., 2008; Cheng et al., 2011). The same actin-defective FH2 fragments of both mDia2 and mDia3 retain their ability to bind to MTs, EB1, and APC and generate cold-stable MTs in vitro (Bartolini et al., 2008; Cheng et al., 2011). Hence the FH2 domain of mDia functions in both actin assembly and MT stabilization, suggesting that actin and MTs may compete for this formin in vivo. Molecules that bind to mDia1 may enhance the intrinsic activity of mDia1 toward one of the cytoskeletal elements (Wen et al., 2004; Okada et al., 2010).
We explored the relationship between the actin and MT activities of mDia1 in cells by treating cells with the drugs latrunculin A (LatA) or jasplakinolide (Jasp), which are known to reduce the association of mDia1 with actin filaments. Strikingly, these actin-active drugs induced stable Glu MTs in serum-starved NIH 3T3 cells. We explored the basis for this induction and found that it required mDia1. By testing actin barbed end–interacting proteins, we identified actin-capping protein as a physiological factor that antagonizes mDia1's activity toward actin filaments and enhances its activity toward MTs. Our results identify a new mode of cytoskeletal cross-talk in which a single factor acts sequentially on two cytoskeletal elements.
RESULTS
Actin drugs induce MT stability downstream of Rho and integrin signaling
For testing whether release of mDia1 from actin filaments had an effect on stable MT formation, serum-starved NIH 3T3 cells, which are normally deprived of stable MTs (Gundersen et al., 1994), were incubated with LatA, Jasp, or dimethyl sulfoxide (DMSO) alone for 1 h before analysis of stable MT formation. LatA and Jasp destabilize and stabilize actin filaments, respectively, but both release mDia1 from actin barbed ends (Higashida et al., 2004). Lysophosphatidic acid (LPA), the serum factor responsible for stimulating stable MT formation in fibroblasts (Cook et al., 1998) and Taxol, a drug that stabilizes MTs, were utilized as positive controls. We found that concentrations of LatA and Jasp that affect actin dynamics, but not DMSO alone, induced Glu MTs as assayed immunofluorescently or by Western blot (Figure 1, A–C). Levels of Glu MTs in LatA- or Jasp-treated cells were comparable with those observed in cells treated with the physiological stimulator LPA, but were lower than those observed in cells treated with Taxol, which stabilizes virtually all MTs (Figure 1, A–C). There was no discernible effect of these actin drugs on the overall distribution or levels of dynamic Tyr MTs (Figure 1A and Supplemental Figure S1A). The stability of these de novo–generated Glu MTs was confirmed both by observing their increased levels of acetylation, another posttranslational modification associated with MT longevity, and by their resistance to depolymerization by nocodazole (Figure S1, A–C). These results suggest that actin drugs that release mDia1 from actin filaments induce the formation of a subset of stable, posttranslationally modified MTs.
LatA induction of stable MTs is blocked by dominant-negative EB1 but not upstream inhibitors of the Rho-mDia MT stabilization pathway
As LatA elicited a slightly stronger response in inducing stable Glu MTs than Jasp, we chose to examine its mechanism of action further. As expected, LatA-treated cells had almost no discernible actin stress fibers and partially disrupted cortical actin (Figure S2A). Yet inhibition of myosin or stress fiber formation by myosin II or Rho kinase inhibitors, respectively, did not induce stable Glu MT formation, suggesting that actin-disrupting drugs do not induce MT stability simply by inhibiting myosin contractility or stress fiber formation (Figure S2B).
Given the induction of stable MTs by LatA, we next tested whether LatA functioned within the known Rho/mDia pathway that regulates the selective formation of stable MTs downstream of LPA stimulation (Figure 2A; see Palazzo et al., 2001, 2004; Wen et al., 2004). Initially, we tested inhibitors of the Rho/mDia pathway to determine whether they would block LatA-induced Glu MTs. We analyzed the effects of LatA on MTs in cells microinjected with EB1-C, a C-terminal fragment of EB1 that acts as a dominant negative for Glu MT induction by LPA or active RhoA (Wen et al., 2004), or with botulinin C3 toxin, which specifically inhibits Rho and blocks Glu MT formation induced by LPA (Cook et al., 1998; Figure 2A). C3 toxin had no effect on the induction of Glu MTs by LatA, whereas injection of EB1-C, but not the inactive mutant EB1-C-KR, inhibited the induction of Glu MTs by LatA (Figure 2, B–D). Because RhoA functions upstream of EB1 (Wen et al., 2004), these results suggest that LatA works by stimulating the pathway downstream of RhoA but upstream of EB1.
To further map the level of the pathway at which LatA functioned, we tested whether LatA induced Glu MTs on cells plated on poly-lysine (PL) or in focal adhesion kinase knockout (FAK−/−) cells. Integrin signaling through FAK is necessary for RhoA to activate mDia1 but not for artificial activation of mDia1 by DAD expression (Palazzo et al., 2004). Therefore, if LatA induced Glu MTs in cells plated on PL, this would indicate that LatA functioned at the level of mDia1 or downstream of mDia1. LatA induced Glu MTs in wild-type cells plated on PL and in FAK−/− cells, whereas both treatments prevented LPA-induced Glu MTs (Figure 2, E and F). From these results, we conclude that LatA induces MT stability by functioning downstream of RhoA activation and integrin signaling, but upstream of EB1, giving further support to the possibility that a RhoA effector may be responsible for its effect.
LatA induction of stable MTs requires mDia1
In migrating NIH 3T3 fibroblasts, mDia1 is the RhoA effector responsible for inducing the selective stabilization of MTs by LPA (Palazzo et al., 2001; Wen et al., 2004; Eng et al., 2006; Bartolini et al., 2008; Goulimari et al., 2005). To test whether LatA may be stimulating Glu MTs at the level of mDia1, we knocked down mDia1 by injection of specific small interfering RNA (siRNA) oligoduplexes into serum-starved cells before treatment with LatA (Figure 3, A and B). Cells silenced for mDia1 expression, but not control glyceraldehyde 3-phosphate dehydrogenase (GAPDH) expression, failed to generate Glu MTs upon LatA treatment, indicating that mDia1 is required for LatA-induced MT stability. Knockdown of mDia1 by siRNA transfection also reduced LatA-induced Glu tubulin levels, as shown by immunofluorescence and Western blotting (Figure 3, C and D).
To test whether LatA enhanced mDia1 interaction with MTs in cells, we localized mDia1 and MTs before and after LatA treatment. The overall distribution of mDia1 in untreated cells was diffuse, with some enrichment around the nucleus. On LatA treatment, mDia1's distribution became noticeably filamentous and more concentrated near the nucleus, where it overlapped with the focus of the MTs at the centrosome (Figure 4A). At high magnification, more mDia1 puncta appeared colocalized with individual MTs after LatA treatment (Figure 4A). Quantification of mDia1 fluorescence along MTs showed that significantly more mDia1 colocalized with MTs in LatA-treated cells compared with untreated cells (Figure 4B).
Capping protein regulates Glu MT formation through mDia1
Our results, combined with those of an earlier study that showed mDia1 release upon LatA (Higashida et al., 2004), suggest that reduced association of mDia1 with actin filaments may promote its association with MTs allowing MT stabilization. To further test this idea and examine its possible physiological relevance, we explored whether actin barbed-end binding proteins, which compete with formins, including mDia1, for association with actin filaments (Goode and Eck, 2007), might be involved in MT stabilization. As an initial test of this idea, we expressed capping protein or vasodilator-stimulated phosphoprotein (VASP) in serum-starved cells and assayed induction of Glu MTs (Figure 5). Expression of capping protein, but not VASP, induced the formation of Glu MTs above the levels in nonexpressing cells (Figure 5, A and B). Interestingly, Glu MTs induced by capping protein expression in most of the cells (74%) did not fully extend toward the cell periphery, but rather appeared as short filaments clustered around the centrosome. Capping protein expression also increased the percentage of cells that had MTs resistant to nocodazole (42% of cells expressing capping protein vs. 15% of nonexpressing cells), confirming that capping protein induced MT stability (Figure 5C).
In vitro, mDia and capping protein compete for the barbed ends of actin filaments (Goode and Eck, 2007). To test whether capping protein was capable of dislodging mDia from growing barbed ends in cells, we used total internal reflection fluorescence (TIRF) microscopy to examine the directional movement of green fluorescent protein (GFP)-FH1FH2mDia2 puncta, which reflect actin filament elongation (Higashida et al., 2004; Bartolini et al., 2008). We used mDia2 for this experiment because we found that GFP-FH1FH2mDia2 puncta appeared brighter and were easier to trace in NIH 3T3 cells than GFP-FH1FH2mDia1 puncta. As previously observed, GFP-FH1FH2mDia2 puncta moved in a rectilinear manner into the tips of filopodia-like protrusions in control cells injected with injection marker alone (Figure 5D and Supplemental Video S1). In contrast, GFP-FH1FH2mDia2 puncta exhibited virtually no directional movement in cells injected with injection marker and capping protein (Figure 5D and Video S2), indicating that elevated levels of capping protein prevent mDia2 association with actin barbed ends. Capping protein also prevented mDia1 induction of actin filaments in starved cells when coinjected with constitutively active mDia1 (Figure S3).
We tested whether the formation of stable MTs by elevating capping protein levels was mDia1 dependent. In mDia1-depleted cells, injection of capping protein no longer induced formation of Glu MTs (Figure 5, E and F). Localization of mDia1 in cells injected with capping protein revealed colocalization of mDia1 with Glu MTs in ∼30% of the injected cells, particularly around the centrosome, where capping protein was mostly concentrated (Figure 5G). These results show that increasing capping protein levels induces stable Glu MTs in an mDia1-dependent manner and that elevated capping protein can induce the redistribution of mDia1 to the MT cytoskeleton. Both of these effects are consistent with the ability of capping protein to reduce mDia1 association with actin barbed ends.
Capping protein, the major high-affinity actin barbed-end terminator in migrating cells, is expressed in all tissues in eukaryotes and is highly enriched in lamellipodia, in which it regulates the length of actin filaments and the transition from filopodia to lamellipodia (Cooper and Pollard, 1985; Cooper and Sept, 2008; Mejillano et al., 2004). To test whether capping protein functioned as a physiological regulator of mDia1 in the formation of Glu MTs, we reduced capping protein levels with two different siRNAs targeting the ubiquitously expressed β2 subunit of the capping protein αβ heterodimer. As capping protein is an obligate heterodimer, targeting one of the subunits is effective in depleting both (Mejillano et al., 2004), and we observed ∼50% knockdown of both subunits with the two siRNAs (Figure 6A). Knocking down capping protein significantly reduced the levels of Glu MTs detected by immunofluorescence in proliferating NIH 3T3 cells compared with controls treated with noncoding siRNA (Figure 6, B and C). Capping protein knockdown also reduced the induction of Glu MTs by LPA in serum-starved NIH 3T3 cells, as assayed by immunofluorescence or by Western blot analysis of Glu tubulin levels (∼40% reduction; Figure 6, D and E). Together these results indicate that capping protein plays a physiological role in regulating the levels of Glu MTs.
DISCUSSION
In eukaryotes, the interplay between the actin and MT cytoskeletons is essential for fundamental cellular processes, such as growth, polarity, vesicular transport, and cell division. mDia1 is a RhoA effector that has been implicated both in actin nucleation and polymerization and in MT stabilization downstream of LPA (Goode and Eck, 2007; Bartolini and Gundersen, 2010). Although the two functions are distinct, they both rely on the presence of an intact FH2 domain, suggesting there may be competition between the two cytoskeletal elements in cells.
In this paper, we provide evidence that displacement of mDia1 from actin filaments by capping protein or by actin drugs is sufficient to induce MT stability in serum-starved cells. Induction of MT stabilization by actin disruption was independent of Rho and integrin signaling, while it was substantially reduced in the presence of dominant-negative EB1, which is known to block the effect of LPA and mDia1 on MTs, but not actin remodeling downstream of mDia1 (Figure 2). LatA and capping protein also increased the colocalization of mDia1 with MTs (Figures 4 and 5). These results, coupled with the inability of LatA or capping protein to stimulate MT stabilization in cells depleted of mDia1, strongly suggest that mDia1 mediated the effects of these agents on MTs.
Given that mDia contributes to the formation of actin filaments near the leading edge (Yang et al., 2007), our data suggest a model in which mDia1 released from the actin filaments near the leading edge may stabilize dynamic MTs in the vicinity by binding MTs through association with EB1 and/or through direct interaction with MTs (Figure S4). We propose that capping protein is one of the physiological factors involved in mDia1 release from actin filaments because overexpression of capping protein induced stable MTs in an mDia1-dependent manner, while knockdown reduced stable MT levels in serum-grown cells and in cells stimulated with LPA (Figure 6). Nonetheless, knockdown of capping protein only partially reduced Glu MT levels, which may reflect the incomplete depletion of capping protein we achieved or that additional barbed-end binding proteins contribute to releasing mDia1 so that it can function on MTs. We did not observe induction of Glu MTs upon expression of VASP, but other members of this family, such as Ena or Mena or other proteins affecting actin barbed ends, could be involved. Additional factors may also need to be considered, as recent evidence from studies of yeast formins suggests there are proteins that terminate formin action on actin (Chesarone et al., 2009; Chesarone-Cataldo et al., 2011).
One implication of our model is that some of the mDia1 released from actin would be in an active conformation so that it could interact with MTs in the vicinity. Data to date suggest that the active confirmation of mDia1 for actin filaments and MTs is the same, requiring release of the autoinhibitory DID-DAD interaction (Goode and Eck, 2007; Bartolini and Gundersen, 2010). Thus mDia1 released from actin filaments would be predicted to be in an active conformation with respect to MTs. Active RhoA has been found in the leading edge of cells, and this may contribute to maintaining mDia1 in an active conformation following release from actin filaments. However, this does not explain how LatA and capping protein can stimulate mDia1-dependent MT stabilization in starved cells that have relatively low RhoA GTP levels. Perhaps a local increase in G-actin contributes in these cases; a previous report has implicated G-actin levels in maintaining the activity of mDia1 (Higashida et al., 2008), and both LatA and capping protein overexpression would increase G-actin levels. High G-actin levels, such as those near the dynamic actin filaments at the leading edge, may also contribute to physiologically maintaining mDia1 in an active state. Actin perturbation by drugs or capping protein may also enhance the ability of MTs to access the small amount of active mDia1 in the cortex.
The Glu MTs induced by capping protein injection were not extended but rather appeared as a tangle of filaments near the centrosome (Figure 5). We previously observed the same phenotype when actin-inactivating mutants of a minimally active fragment of mDia2 were tested for induction of MT stability (Bartolini et al., 2008). This suggests that interaction of mDia with actin filaments may be required for anchoring or maintaining stabilized MTs at the cell periphery. Alternatively, these results may indicate that in the absence of an interaction with actin, the activity of the formin becomes “promiscuous,” and rather than being constrained to sites of high concentrations of actin filaments, it is free to stabilize MTs at other sites in the cell.
The model we have proposed, in which there is sequential action of mDia1 on actin filaments and then MTs (Figure S4), helps to explain the observation that stable MTs preferentially form toward the leading edge of migrating cells (Gundersen and Bulinski, 1988). It is worth noting that there are other cases in which there appears to be coordinated action of formins on actin and MTs. During cytokinesis, formins contribute to the formation of the actin contractile ring and may also play a role in stabilizing MTs in the adjacent spindle midzone (Kato et al., 2001; Rundle et al., 2004; Watanabe et al., 2008). In Drosophila oocytes, formins regulate actin and MTs during cytoplasmic streaming (Rosales-Nieves et al., 2006). During axon outgrowth, stable MTs form in the proximity of actin filaments in the growth cone, and actin drugs are known to stimulate axon outgrowth and MT stability (Bradke and Dotti, 1999). Interestingly, nanomolar Jasp was recently found to promote stabilization of MTs and extension of projections in detached and circulating tumor cells, and while the mechanism was not studied, this may be another case in which formins may mediate sequential activity on actin and MTs (Balzer et al., 2010). It will be interesting to explore whether the model of sequential action of formins on actin and MTs we propose will apply to these and other cellular activities in which the actin and MT cytoskeletons are coordinated.
Finally, our results showing that drugs whose primary target is the actin cytoskeleton also affect MT stability raise a cautionary note in interpreting the action of these drugs in studies of cells. Secondary consequences of the action of cytoskeletal drugs have been known for some time, with one of the best examples being the activation of Rho GTPase by both actin filament-disruptive (cytochalasin D) and MT-disruptive (nocodazole) drugs (Enomoto, 1996; Ren et al., 1999). Given the myriad interactions of the cytoskeleton with other cellular processes, it is perhaps not surprising that cytoskeletal drugs lead to multiple downstream events, but it will be important to distinguish primary from secondary effects in future studies with these drugs.
MATERIALS AND METHODS
Plasmids and reagents
Construction of pGST-EB1-C and pGST-EB1-C-KR were described previously (Wen et al., 2004). pYFP-capping protein α1 and β2 and capping protein α1/β2::HIS in pRSF-DUET-1 were generously provided by J. Cooper (Washington University, St. Louis, MO). pVASP-GFP and Cherry-FH1-COOH mDia1 were generous gifts from F. B. Gertler (MIT, Cambridge, MA) and B. L. Goode (Brandeis University, Boston, MA), respectively. All chemicals were obtained from Sigma-Aldrich (St. Louis, MO) unless otherwise noted. LPA was purchased from Avanti (Alabaster, AL), and LatA was a gift from P. Crews (University of California, Santa Cruz, CA). Jasp, Y27632, and blebbistatin were purchased from Calbiochem (San Diego, CA). Mouse anti–acetylated tubulin (1:5000, clone 6-11B-1) was from Sigma-Aldrich and rabbit anti–β-catenin (1:250) was from Invitrogen (Carlsbad, CA).
Protein purification
Capping protein α1/β2::HIS in pRSF-DUET-1 was transformed into BL21DE3 cells and the expressed protein was affinity-purified on nickel resin (Clontech, Mountain View, CA) according to the manufacturer's recommended protocols. Purified protein was dialyzed against H-KCl and concentrated using Amicon Ultra-15 (Millipore, Billerica, MA).
Cell culture and microinjection
NIH 3T3 cells were grown in DMEM and 10% calf serum, whereas FAK−/− cells and FAK−/− cells reconstituted with wild-type FAK (DP3) were grown in DMEM plus 10% fetal calf serum, as previously described (Cook et al., 1998; Kreitzer et al., 1999; Palazzo et al., 2001, 2004). For drug and microinjection experiments, cells were grown to confluence on acid-washed coverslips, serum-starved for 48 h, and wounded 30 min before drug or LPA (5 μM) treatment for 1 h or microinjection, as described previously (Cook et al., 1998; Kreitzer et al., 1999; Palazzo et al., 2001). cDNA plasmids were diluted in H-KCl buffer (10 mM HEPES, pH 7.4, and 140 mM KCl) at 50–200 μg/ml, microinjected into nuclei, and allowed to express for 2 h before fixation. siRNA oligoduplexes were diluted in RNAse-free water and injected at 20 μM into 1-d serum-starved cells in combination with the marker fluorescein isothiocyanate (FITC)-dextran (5 mg/ml) 1 d before LatA treatment. Recombinant proteins were microinjected at 2 mg/ml in H-KCl buffer alone or in combination with FITC-dextran, and injected cells were incubated for 2 h before fixation. C3 botulinum toxin (0.1 mg/ml; Cytoskeleton, Denver, CO) was microinjected into cells and after 30 min, cells were treated with LatA for 45 min before fixation. Cells transfected with GFP-FH1FH2mDia2 for 24 h were injected with 200 μM of His-tagged capping protein α1/β2 together with 1 mg/ml of 3 kDa tetramethylrhodamine dextran (Invitrogen) in H-KCl buffer.
Cells spreading assays
Cell spreading assays were as previously described (Palazzo et al., 2004). Briefly, NIH 3T3 cells were detached with trypsin, the trypsin was quenched with soybean trypsin inhibitor (1 mg/ml in phosphate-buffered saline [PBS]), and the cells collected by centrifugation. Cells were washed twice with DMEM with 2% bovine serum albumin and incubated at 37°C in the same medium for 60 min, with the tube rotated every 5 min to prevent cells from clumping. Cells were then plated on coverslips coated with PL (100 μg/ml in PBS) for the indicated times in the presence of either LatA (0.1 μM) or LPA (5 μM) prior to methanol fixation at −20°C for 10 min.
cDNA, siRNA transfection, and Western blot analysis
NIH 3T3 cells were transfected with cDNAs using Lipofectamine Plus (Invitrogen) according to the manufacturer's specifications. siRNA duplexes targeting mDia1 and capping protein β2 were based on previously published sequences (Mejillano et al., 2004; Eng et al., 2006) and were purchased from Shanghai GenePharma and resuspended in RNase-free water at a concentration of 20 μM. The mouse GAPDH siRNA sequence was 5′-AAAGUUGUCAUGGAUGACCTT-3′ and was used as a negative control, as previous experiments showed that knockdown of GAPDH did not affect Glu MT levels (Wen et al., 2004; Eng et al., 2006). NIH 3T3 fibroblasts were transfected with siRNA duplexes using Lipofectamine RNAiMax (Invitrogen) according to the manufacturer's instructions. Knockdown efficiency and effects on Glu MTs formation were analyzed 48 h after transfection. In the LPA stimulation experiments, cells were transfected with siRNA oligoduplexes and 24 h later were serum-starved for 2 d before stimulation. For Western blot analysis, unless stated otherwise, cells were lysed in RIPA buffer (1% TX-100, 50 mM Tris, pH 7.4, 150 mM NaCl, 0.1% SDS, 0.5% Na-deoxycholate, 1 mM phenylmethylsulfonyl fluoride, and protease and phosphatase inhibitors), boiled in Laemmli sample buffer, and separated by SDS–PAGE. Lysate protein concentration was determined by bicinchoninic acid assay and normalized for loading. Antibodies used for blotting were: mouse anti–capping protein α1/α2 subunits (5B12.3) and β2 subunit (3F2.3) (1:1000; Developmental Hybridoma Bank, University of Iowa, Iowa City, IA), mouse anti-mDia1 (clone 51, 1:500; BD Biosciences, San Jose, CA), mouse anti-vinculin (VIN-11-5, 1:5000), rat anti–tyrosinated tubulin (YL-1/2, 1:1000), rabbit anti–Glu tubulin (1:5000; Gundersen et al., 1984), mouse (1:8000) or rabbit (1:1000) anti-GAPDH, mouse anti–β-actin (C4, 1:1000), followed by the appropriate IR680- or IR800-conjugated secondary antibodies (1:5000; Rockland Immunochemicals, Gilbertsville, PA). Quantification was performed with an Odyssey imaging system (LI-COR Biosciences, Lincoln, NE) and digitally processed with Adobe Photoshop (San Jose, CA).
Epifluorescence and TIRF microscopy
In most cases, cells were fixed in methanol at −20°C for 10 min and rehydrated in TBS (10 mM Tris-buffered saline, pH 7.4). Antibodies used for immunostaining were: mouse anti-mDia1 (clone 51, 1:100; BD Transduction), rat anti–tyrosinated tubulin (YL-1/2, 1:10), rabbit anti–Glu tubulin (1:500), mouse anti-GST (1:100; Cell Signaling, Danvers, MA), mouse anti–β-actin (C4, 1:100), mouse anti-GAPDH (1:100), mouse anti–acetylated tubulin (1:100, clone 6-11B-1), followed by the appropriate Cy dye-conjugated secondary antibodies preabsorbed to minimize cross- reaction with other species (Jackson ImmunoResearch, West Grove, PA). For localizing F-actin, cells were fixed in 4% paraformaldehyde for 10 min, permeabilized with 0.5% Triton X-100 for 5 min, and stained with rhodamine-phalloidin (1:500; Invitrogen). Stained samples were observed with a Nikon Optiphot microscope using a 60× Plan-Apochromat objective and filter cubes optimized for coumarin, fluorescein/GFP, rhodamine, and Cy5 fluorescence. Images were acquired with a MicroMax camera (Kodak KAF 1400-chip; Princeton Instruments, Trenton, NJ) using MetaMorph software (MDS Analytical Technologies, Sunnyvale, CA). Cells were scored positive for Glu MTs if > 10 MTs were brightly stained by the Glu antibody. This cutoff for scoring Glu MTs was chosen because serum-starved NIH 3T3 cells generally have fewer than 10 Glu MTs (see Gundersen et al., 1994; Cook et al., 1998; Palazzo et al., 2001). These brightly labeled Glu MTs are clearly distinguishable from the total population of MTs, which contains low levels of Glu tubulin. A minimum of 50–100 cells for each condition were scored per experiment. Data shown are means from at least three independent experiments.
Quantification of mDia1 on MTs
For measuring the intensity of mDia1 fluorescence per MT pixel before and after LatA treatment, a line of 100 pixels was drawn on single MTs near the edge of the cell, and the intensity of mDia1 signal was measured on that line. Line scans of >50 individual MTs per condition were derived using MetaMorph software, and their means were analyzed for statistical significance after background subtraction.
Live-cell imaging by TIRF microscopy
Live-cell imaging of GFP-FH1FH2mDia2 by TIRF microscopy was performed as previously described with a few modifications (Bartolini et al., 2008). Briefly, GFP-FH1FH2mDia2–transfected cells were injected with 200 μM capping protein α1/β2 and injection marker or with injection marker alone. Cells were imaged using MetaMorph software 10 min after injection in recording medium plus 2% calf serum at 37°C. To enhance detection of moving GFP-FH1FH2mDia2 puncta, we background-subtracted each image using an averaged image of the entire image stack of the movie. Kymographs were then generated from the background-subtracted images using selected regions of the cell periphery.
Supplementary Material
Acknowledgments
We thank J. Cooper, B. Goode, F. Gertler, and P. Crews for reagents and Sara Nik for excellent technical assistance. We are grateful to the members of the Gundersen lab for critical reading of the manuscript. This work was supported by National Institutes of Health grant GM 62939 to G.G.G.
Abbreviations used:
- APC
adenomatous polyposis coli
- DAD
diaphanous autoregulatory domain
- DID
diaphanous inhibitory domain
- DMSO
dimethyl sulfoxide
- DP3
FAK reexpressing FAK−/−
- DRF
diaphanous-related formin
- FAK−/−
focal adhesion kinase knockout
- FH1
formin homology 1
- FH2
formin homology 2
- FITC
fluorescein isothiocyanate
- GAPDH
glyceraldehyde 3-phosphate dehydrogenase
- GBD
GTPase binding domain
- GFP
green fluorescent protein
- IgG
immunoglobulin G
- Jasp
jasplakinolide
- LatA
latrunculin A
- LPA
lysophosphatidic acid
- MT
microtubule
- PBS
phosphate-buffered saline
- PL
poly-lysine
- siRNA
small interfering RNA
- TIRF
total internal reflection fluorescence
- VASP
vasodilator-stimulated phosphoprotein
Footnotes
This article was published online ahead of print in MBoC in Press (http://www.molbiolcell.org/cgi/doi/10.1091/mbc.E12-05-0338) on August 23, 2012.
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