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Acta Crystallographica Section E: Structure Reports Online logoLink to Acta Crystallographica Section E: Structure Reports Online
. 2012 Sep 1;68(Pt 10):o2825. doi: 10.1107/S1600536812037142

S-Phenyl benzothio­ate

Yonas H Belay a, Henok H Kinfe a, Alfred Muller a,*
PMCID: PMC3470187  PMID: 23125631

Abstract

In the title compound, C13H10OS, the phenyl rings are inclined to one another by 51.12 (8)°. There is a short C—H⋯S contact in the molecule.In the crystal, molecules are linked via C—H⋯O hydrogen bonds forming chains along the a axis. Molecules are also linked by C—H⋯π and weak π–π interactions [centroid–centroid distance = 3.9543 (10) Å].

Related literature  

The title compound was obtained by the reaction of thiophenolyate and benzoyl chloride in an alkaline medium. For background to the title compound, see: Reddy et al. (2010); Katritzky et al. (2007). For details of the Cambridge Structural Database, see: Allen (2002).graphic file with name e-68-o2825-scheme1.jpg

Experimental  

Crystal data  

  • C13H10OS

  • M r = 214.27

  • Monoclinic, Inline graphic

  • a = 5.7203 (1) Å

  • b = 15.1315 (3) Å

  • c = 12.0606 (3) Å

  • β = 96.867 (1)°

  • V = 1036.44 (4) Å3

  • Z = 4

  • Cu Kα radiation

  • μ = 2.49 mm−1

  • T = 100 K

  • 0.25 × 0.12 × 0.12 mm

Data collection  

  • Bruker APEX DUO 4K-CCD diffractometer

  • Absorption correction: multi-scan (SADABS; Bruker, 2008) T min = 0.575, T max = 0.754

  • 9164 measured reflections

  • 1759 independent reflections

  • 1702 reflections with I > 2σ(I)

  • R int = 0.022

Refinement  

  • R[F 2 > 2σ(F 2)] = 0.032

  • wR(F 2) = 0.082

  • S = 1.04

  • 1759 reflections

  • 136 parameters

  • H-atom parameters constrained

  • Δρmax = 0.35 e Å−3

  • Δρmin = −0.26 e Å−3

Data collection: APEX2 (Bruker, 2011); cell refinement: SAINT (Bruker, 2008); data reduction: SAINT and XPREP (Bruker, 2008); program(s) used to solve structure: SIR97 (Altomare et al., 1999); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008); molecular graphics: DIAMOND (Brandenburg & Putz, 2005); software used to prepare material for publication: WinGX (Farrugia, 1999).

Supplementary Material

Crystal structure: contains datablock(s) global, I. DOI: 10.1107/S1600536812037142/ds2217sup1.cif

e-68-o2825-sup1.cif (20.5KB, cif)

Structure factors: contains datablock(s) I. DOI: 10.1107/S1600536812037142/ds2217Isup2.hkl

e-68-o2825-Isup2.hkl (84.9KB, hkl)

Supplementary material file. DOI: 10.1107/S1600536812037142/ds2217Isup3.cml

Additional supplementary materials: crystallographic information; 3D view; checkCIF report

Table 1. Hydrogen-bond geometry (Å, °).

Cg1 and Cg2 are the centroids of the C2–C7 and C8–C13 rings, respectively.

D—H⋯A D—H H⋯A DA D—H⋯A
C7—H7⋯S1 0.95 2.52 2.9592 (16) 109
C13—H13⋯O1i 0.95 2.56 3.4889 (18) 167
C10—H10⋯Cg1ii 0.95 2.97 3.506 (2) 117
C5—H5⋯Cg2iii 0.95 2.73 3.5915 (19) 152

Symmetry codes: (i) Inline graphic; (ii) Inline graphic; (iii) Inline graphic.

Acknowledgments

Research funds of the University of Johannesburg and the Research Center for Synthesis and Catalysis are gratefully acknowledged. Mrs Z. H. Phasha is thanked for the data collection.

supplementary crystallographic information

Comment

Reaction of thiophenolyate and benzyol chloride in alkaline medium was described previously by Reddy et al., 2010. We have repeated the preparation of this compound to be used as starting material in some of our research. Benzoylation of thiophenol afforded colorless crystals of the title compound (see scheme and Figure 1) suitable for single crystal X-ray analysis of which the structure is reported herein. Molecules of the title compound crystalizes in the P21/c (Z=4) space group. All bond lengths are within their normal ranges (Allen, 2002). In the crystal packing several C—H···O/S/π interactions (see table 1, Fig. 2) as well as π-π stacking are observed (centroid to centroid distance = 3.9543 (10) Å, ring slippage = 1.366 Å).

Experimental

A mixture of sodium hydroxide (344 mg, 8.61 mmol) and thiophenol (0.9 ml, 8.61 mmol) were dissolved in methanol (22 ml) for about 10 minutes. Benzoyl chloride (1 ml) was added to it. The reaction mixture was stirred overnight and then poured into ice-cold water. Afterwards it was filtered and dried to afford the title compound as white crystals in 63% yield.

Refinement

All hydrogen atoms were positioned in geometrically idealized positions with C—H = 0.95 Å and were allowed to ride on their parent atoms with Uiso(H) = 1.2Ueq. A discrepant reflection (1 3 2) was removed in the final stages of refinement

Figures

Fig. 1.

Fig. 1.

A view of (1). Displacement ellipsoids are drawn at the 50% probability level.

Fig. 2.

Fig. 2.

Packing diagram of (1) showing the C—H···O/S/π interactions as well as the π-π stacking.

Crystal data

C13H10OS F(000) = 448
Mr = 214.27 Dx = 1.373 Mg m3
Monoclinic, P21/c Cu Kα radiation, λ = 1.54178 Å
Hall symbol: -P 2ybc Cell parameters from 6683 reflections
a = 5.7203 (1) Å θ = 4.7–65.8°
b = 15.1315 (3) Å µ = 2.49 mm1
c = 12.0606 (3) Å T = 100 K
β = 96.867 (1)° Rectangular, colourless
V = 1036.44 (4) Å3 0.25 × 0.12 × 0.12 mm
Z = 4

Data collection

Bruker APEX DUO 4K-CCD diffractometer 1759 independent reflections
Radiation source: Incoatec IµS microfocus X-ray source 1702 reflections with I > 2σ(I)
Incoatec Quazar Multilayer Mirror monochromator Rint = 0.022
Detector resolution: 8.4 pixels mm-1 θmax = 66.4°, θmin = 4.7°
φ and ω scans h = −2→6
Absorption correction: multi-scan (SADABS; Bruker, 2008) k = −17→17
Tmin = 0.575, Tmax = 0.754 l = −14→13
9164 measured reflections

Refinement

Refinement on F2 Primary atom site location: structure-invariant direct methods
Least-squares matrix: full Secondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.032 Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.082 H-atom parameters constrained
S = 1.04 w = 1/[σ2(Fo2) + (0.0364P)2 + 0.7558P] where P = (Fo2 + 2Fc2)/3
1759 reflections (Δ/σ)max = 0.001
136 parameters Δρmax = 0.35 e Å3
0 restraints Δρmin = −0.26 e Å3

Special details

Experimental. The intensity data was collected on a Bruker Apex DUO 4 K CCD diffractometer using an exposure time of 5 s/frame. A total of 2274 frames were collected with a frame width of 1° covering up to θ = 66.38° with 96.3% completeness accomplished.Analytical data: mp: 53–55 °C (Lit. 54–55 °C; Katritzky et al., 2007); 1H NMR (CDCl3, 400 MHz): d 8.03 (d, J = 0.8 Hz, 1H), 8.01(d, J = 1.2 Hz, 1H), 7.62–7.58 (m, 1H), 7.52–7.44 (m, 7H), 13C NMR (CDCl3, 400 MHz): d 190.1, 136.6, 135.1, 133.6, 129.5, 129.2, 128.7, 127.5, 127.3.
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.

Fractional atomic coordinates and isotropic or equivalent isotropic displacement parameters (Å2)

x y z Uiso*/Ueq
S1 0.66521 (7) 0.44609 (2) 0.09450 (3) 0.02499 (16)
O1 1.05856 (19) 0.36323 (7) 0.17500 (9) 0.0242 (3)
C1 0.9304 (3) 0.42516 (10) 0.18525 (12) 0.0180 (3)
C2 0.9751 (3) 0.49420 (10) 0.27395 (12) 0.0174 (3)
C3 1.1950 (3) 0.49605 (10) 0.33797 (13) 0.0210 (3)
H3 1.3106 0.4531 0.3262 0.025*
C4 1.2443 (3) 0.56059 (11) 0.41871 (14) 0.0237 (4)
H4 1.3943 0.5619 0.462 0.028*
C5 1.0767 (3) 0.62332 (11) 0.43703 (13) 0.0234 (3)
H5 1.1117 0.6673 0.4928 0.028*
C6 0.8580 (3) 0.62174 (11) 0.37383 (13) 0.0239 (4)
H6 0.7429 0.6647 0.3863 0.029*
C7 0.8067 (3) 0.55781 (11) 0.29258 (13) 0.0214 (3)
H7 0.6566 0.5571 0.2493 0.026*
C8 0.6486 (3) 0.35922 (10) −0.00504 (12) 0.0182 (3)
C9 0.8130 (3) 0.35150 (10) −0.08087 (13) 0.0211 (3)
H9 0.9497 0.3877 −0.0737 0.025*
C10 0.7749 (3) 0.29047 (11) −0.16688 (13) 0.0231 (4)
H10 0.8871 0.2843 −0.2184 0.028*
C11 0.5735 (3) 0.23835 (10) −0.17811 (13) 0.0221 (3)
H11 0.5472 0.1972 −0.2378 0.027*
C12 0.4107 (3) 0.24634 (10) −0.10217 (13) 0.0210 (3)
H12 0.2734 0.2105 −0.1097 0.025*
C13 0.4483 (3) 0.30674 (10) −0.01499 (12) 0.0192 (3)
H13 0.3376 0.312 0.0374 0.023*

Atomic displacement parameters (Å2)

U11 U22 U33 U12 U13 U23
S1 0.0287 (3) 0.0191 (2) 0.0243 (2) 0.00622 (15) −0.00893 (16) −0.00571 (15)
O1 0.0236 (6) 0.0242 (6) 0.0242 (6) 0.0056 (5) 0.0007 (4) −0.0028 (5)
C1 0.0190 (7) 0.0164 (7) 0.0181 (8) −0.0014 (6) 0.0004 (6) 0.0032 (6)
C2 0.0203 (7) 0.0174 (8) 0.0146 (7) −0.0018 (6) 0.0027 (6) 0.0027 (6)
C3 0.0211 (8) 0.0189 (8) 0.0224 (8) 0.0007 (6) 0.0002 (6) 0.0032 (6)
C4 0.0235 (8) 0.0246 (8) 0.0215 (8) −0.0034 (6) −0.0043 (6) 0.0024 (6)
C5 0.0298 (8) 0.0226 (8) 0.0174 (7) −0.0044 (6) 0.0015 (6) −0.0019 (6)
C6 0.0245 (8) 0.0247 (8) 0.0233 (8) 0.0008 (6) 0.0055 (6) −0.0040 (7)
C7 0.0188 (8) 0.0259 (9) 0.0191 (8) 0.0003 (6) 0.0010 (6) −0.0019 (6)
C8 0.0223 (8) 0.0148 (7) 0.0161 (7) 0.0031 (6) −0.0030 (6) 0.0010 (6)
C9 0.0203 (8) 0.0205 (8) 0.0220 (8) −0.0013 (6) 0.0006 (6) 0.0060 (6)
C10 0.0248 (8) 0.0272 (9) 0.0181 (8) 0.0047 (6) 0.0054 (6) 0.0048 (6)
C11 0.0285 (8) 0.0196 (8) 0.0171 (8) 0.0045 (6) −0.0021 (6) −0.0021 (6)
C12 0.0195 (7) 0.0187 (8) 0.0242 (8) −0.0010 (6) −0.0005 (6) −0.0006 (6)
C13 0.0202 (8) 0.0191 (8) 0.0184 (7) 0.0030 (6) 0.0024 (6) 0.0010 (6)

Geometric parameters (Å, º)

S1—C8 1.7751 (15) C6—H6 0.95
S1—C1 1.7894 (15) C7—H7 0.95
O1—C1 1.2054 (19) C8—C13 1.387 (2)
C1—C2 1.495 (2) C8—C9 1.393 (2)
C2—C3 1.395 (2) C9—C10 1.386 (2)
C2—C7 1.399 (2) C9—H9 0.95
C3—C4 1.384 (2) C10—C11 1.390 (2)
C3—H3 0.95 C10—H10 0.95
C4—C5 1.385 (2) C11—C12 1.387 (2)
C4—H4 0.95 C11—H11 0.95
C5—C6 1.385 (2) C12—C13 1.390 (2)
C5—H5 0.95 C12—H12 0.95
C6—C7 1.383 (2) C13—H13 0.95
C8—S1—C1 104.81 (7) C6—C7—H7 119.9
O1—C1—C2 124.23 (13) C2—C7—H7 119.9
O1—C1—S1 123.81 (12) C13—C8—C9 120.70 (14)
C2—C1—S1 111.96 (10) C13—C8—S1 117.35 (12)
C3—C2—C7 119.34 (14) C9—C8—S1 121.36 (12)
C3—C2—C1 118.40 (13) C10—C9—C8 119.29 (14)
C7—C2—C1 122.24 (13) C10—C9—H9 120.4
C4—C3—C2 119.85 (15) C8—C9—H9 120.4
C4—C3—H3 120.1 C9—C10—C11 120.34 (14)
C2—C3—H3 120.1 C9—C10—H10 119.8
C3—C4—C5 120.60 (15) C11—C10—H10 119.8
C3—C4—H4 119.7 C12—C11—C10 120.02 (15)
C5—C4—H4 119.7 C12—C11—H11 120
C6—C5—C4 119.80 (15) C10—C11—H11 120
C6—C5—H5 120.1 C11—C12—C13 120.09 (14)
C4—C5—H5 120.1 C11—C12—H12 120
C7—C6—C5 120.21 (15) C13—C12—H12 120
C7—C6—H6 119.9 C8—C13—C12 119.54 (14)
C5—C6—H6 119.9 C8—C13—H13 120.2
C6—C7—C2 120.20 (14) C12—C13—H13 120.2
C8—S1—C1—O1 −0.46 (15) C3—C2—C7—C6 −0.1 (2)
C8—S1—C1—C2 178.75 (10) C1—C2—C7—C6 −178.42 (14)
O1—C1—C2—C3 10.8 (2) C1—S1—C8—C13 122.78 (12)
S1—C1—C2—C3 −168.42 (11) C1—S1—C8—C9 −66.00 (14)
O1—C1—C2—C7 −170.86 (15) C13—C8—C9—C10 −0.1 (2)
S1—C1—C2—C7 9.93 (18) S1—C8—C9—C10 −171.00 (11)
C7—C2—C3—C4 −0.1 (2) C8—C9—C10—C11 0.8 (2)
C1—C2—C3—C4 178.26 (14) C9—C10—C11—C12 −0.9 (2)
C2—C3—C4—C5 0.3 (2) C10—C11—C12—C13 0.3 (2)
C3—C4—C5—C6 −0.2 (2) C9—C8—C13—C12 −0.5 (2)
C4—C5—C6—C7 0.0 (2) S1—C8—C13—C12 170.75 (11)
C5—C6—C7—C2 0.2 (2) C11—C12—C13—C8 0.4 (2)

Hydrogen-bond geometry (Å, º)

Cg1 and Cg2 are the centroids of the C2–C7 and C8–C13 rings, respectively.

D—H···A D—H H···A D···A D—H···A
C7—H7···S1 0.95 2.52 2.9592 (16) 109
C13—H13···O1i 0.95 2.56 3.4889 (18) 167
C10—H10···Cg1ii 0.95 2.97 3.506 (2) 117
C5—H5···Cg2iii 0.95 2.73 3.5915 (19) 152

Symmetry codes: (i) x−1, y, z; (ii) −x+2, −y+1, −z; (iii) −x+2, y+1/2, −z+1/2.

Footnotes

Supplementary data and figures for this paper are available from the IUCr electronic archives (Reference: DS2217).

References

  1. Allen, F. H. (2002). Acta Cryst. B58, 380–388. [DOI] [PubMed]
  2. Altomare, A., Burla, M. C., Camalli, M., Cascarano, G. L., Giacovazzo, C., Guagliardi, A., Moliterni, A. G. G., Polidori, G. & Spagna, R. (1999). J. Appl. Cryst. 32, 115–119.
  3. Brandenburg, K. & Putz, H. (2005). DIAMOND Crystal Impact GbR, Bonn, Germany.
  4. Bruker (2008). SADABS, SAINT and XPREP BrukerAXS Inc., Madison, Wisconsin, USA.
  5. Bruker (2011). APEX2 BrukerAXS Inc., Madison, Wisconsin, USA.
  6. Farrugia, L. J. (1999). J. Appl. Cryst. 32, 837–838.
  7. Katritzky, A. R., Shestopalov, A. A. & Suzuki, K. (2007). Synthesis, 11, 1806–1813.
  8. Reddy, M. V. R., Pallela, V. R., Cosenza, S. C., Mallireddigari, M. R., Patti, R., Bonagura, M., Truongcao, M., Akula, B., Jatiani, S. S. & Reddy, E. P. (2010). Bioorg. Med. Chem. 18, Issue 6, 2317–2326. [DOI] [PubMed]
  9. Sheldrick, G. M. (2008). Acta Cryst. A64, 112–122. [DOI] [PubMed]

Associated Data

This section collects any data citations, data availability statements, or supplementary materials included in this article.

Supplementary Materials

Crystal structure: contains datablock(s) global, I. DOI: 10.1107/S1600536812037142/ds2217sup1.cif

e-68-o2825-sup1.cif (20.5KB, cif)

Structure factors: contains datablock(s) I. DOI: 10.1107/S1600536812037142/ds2217Isup2.hkl

e-68-o2825-Isup2.hkl (84.9KB, hkl)

Supplementary material file. DOI: 10.1107/S1600536812037142/ds2217Isup3.cml

Additional supplementary materials: crystallographic information; 3D view; checkCIF report


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