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. 2012 Sep 3;28(21):2724–2731. doi: 10.1093/bioinformatics/bts525

Fig. 3.

Fig. 3.

Example usage of JEnsembl Java API (v1.12). The Species ‘ecoli’ retrieved in the final code block is actually a CollectionSpecies because it is retrieved from the ‘escherichia_shigella_collection_core’ databases. CollectionSpecies are slightly less reliable access points than normal Species as there is no guarantee of stable species, strain names and aliases between releases