Abstract
A chitinase producing bacterium Enterobacter sp. NRG4, previously isolated in our laboratory, has been reported to have a wide range of applications such as anti-fungal activity, generation of fungal protoplasts and production of chitobiose and N-acetyl D-glucosamine from swollen chitin. In this paper, the gene coding for Enterobacter chitinase has been cloned and expressed in Escherichia coli BL21(DE3). The structural portion of the chitinase gene comprised of 1686 bp. The deduced amino acid sequence of chitinase has high degree of homology (99.0%) with chitinase from Serratia marcescens. The recombinant chitinase was purified to near homogeneity using His-Tag affinity chromatography. The purified recombinant chitinase had a specific activity of 2041.6 U mg−1. It exhibited similar properties pH and temperature optima of 5.5 and 45°C respectively as that of native chitinase. Using swollen chitin as a substrate, the Km, kcat and catalytic efficiency (kcat/Km) values of recombinant chitinase were found to be 1.27 mg ml−1, 0.69 s−1 and 0.54 s−1M−1 respectively. Like native chitinase, the recombinant chitinase produced medicinally important N-acetyl D-glucosamine and chitobiose from swollen chitin and also inhibited the growth of many fungi.
Keywords: Chi gene, Enterobacter sp. NRG4, Expression, His-Tag affinity chromatography, Recombinant chitinase
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References
- 1.Ausubel F.M. Short Protocols in Molecular Biology. 3rd edn. USA: John Wiley and Sons, Inc.; 1992. [Google Scholar]
- 2.Barboza-Corona J.E., Nieto-Mazzocco E., Velazquez-Robledo R., Salcedo-Hermandez R., Bautista M., Jimenez B., Iberra J.E. Cloning, Sequencing, and Expression of the chitinase gene chiA74 from Bacillus thuringiensis. Appl Environ Microbiol. 2003;69:1023–1029. doi: 10.1128/AEM.69.2.1023-1029.2003. [DOI] [PMC free article] [PubMed] [Google Scholar]
- 3.Chernin L.S., Fuente L., Sobolev V., Haran S., Vorgias C.E., Oppenheim A.B., Chet I. Molecular cloning, structural analysis, and expression in Escherichia coli of a chitinase gene from Enterobacter agglomerans. Appl Environ Microbiol. 1997;63:834–839. doi: 10.1128/aem.63.3.834-839.1997. [DOI] [PMC free article] [PubMed] [Google Scholar]
- 4.Dahiya N., Tewari R., Hoondal G.S. Biotechnological aspects of chitinolytic enzymes: a review. Appl Microbiol Biotechnol. 2005;253:183–187. doi: 10.1007/s00253-005-0183-7. [DOI] [PubMed] [Google Scholar]
- 5.Dahiya N., Tewari R., Tiwari R.P., Hoondal G.S. Chitinase from Enterobacter sp. NRG4: its purification, characterization and reaction pattern. Electronic J Biotechnol. 2005;8:134–145. doi: 10.2225/vol8-issue2-fulltext-6. [DOI] [Google Scholar]
- 6.Dahiya N., Tewari R., Tiwari R.P., Hoondal G.S. Production of an antifungal chitinase from Enterobacter sp. NRG4 and its application in protoplast production. World J Microbiol Biotechnol. 2005;21:1611–1616. doi: 10.1007/s11274-005-8343-6. [DOI] [Google Scholar]
- 7.Deshpande M.V., Balkrishnan H., Ranjekar P.K., Shanker V. Isolation and immobilization of Schlerotium rolfsii protoplasts. Biotechnol Tech. 1987;9:49–52. [Google Scholar]
- 8.Felse P., Panda T. Regulation and cloning of microbial chitinase genes. Appl Microbiol Biotechnol. 1999;51:141–151. doi: 10.1007/s002530051374. [DOI] [PubMed] [Google Scholar]
- 9.Jeuniaux C. Chitinases. In: Neufeld E.F., Ginsburg V., editors. Complex Carbohydrates. Methods in Enzymology. New York: Academic Press, Inc.; 1966. pp. 644–650. [Google Scholar]
- 10.Jones J.D.G., Grady K.L., Suslow T.V., Bedbrook J.R. Isolation and characterization of genes encoding two chitinase enzymes from Serratia marcescens. EMBO J. 1986;5:467–473. doi: 10.1002/j.1460-2075.1986.tb04235.x. [DOI] [PMC free article] [PubMed] [Google Scholar]
- 11.Lan X., Zhang X., Hu J., Shimosaka M. Cloning, expression, and characterization of a chitinase from the chitinolytic bacterium Aeromonas hydrophila strain SUWA-9. Biosci Biotechnol Biochem. 2006;70:2437–2442. doi: 10.1271/bbb.60169. [DOI] [PubMed] [Google Scholar]
- 12.Lowry O.H., Rosebrough N.J., Farr A.L., Randall R.J. Protein measurement with Folin phenol reagent. J Biol Chem. 1951;193:265–275. [PubMed] [Google Scholar]
- 13.Mizuno K., Kimura O., Tachiki T. Protoplast formation from Schizophyllum commune by culture filtrate of Bacillus circulans KA-304 grown on a cell-wall preparation of S. commune as a carbon source. Biosci Biotechnol Biochem. 1997;61:852–857. doi: 10.1271/bbb.61.852. [DOI] [PubMed] [Google Scholar]
- 14.Monreal J., Reese E.T. The chitinase of Serratia marcescans. Can J Microbiol. 1969;15:689–696. doi: 10.1139/m69-122. [DOI] [PubMed] [Google Scholar]
- 15.Morimoto K., Karita S., Kimura K.S., Ohmiya K. Cloning, sequencing, and expression of the gene encoding Clostridium paraputrificum chitinase ChiB and analysis of the functions of novel cadherin-like domains and a chitin-binding domain. J Bacteriol. 1997;179:7306–7314. doi: 10.1128/jb.179.23.7306-7314.1997. [DOI] [PMC free article] [PubMed] [Google Scholar]
- 16.Orikoshi H., Baba N., Nakayama S., Kashu H., Miyamoto K., Yasuda M., Inamori Y., Tsujibo H. Molecular analysis of the gene encoding a novel cold-adapted chitinase (ChiB) from a marine bacterium Alteromonas sp. Strain O-7. J Bacteriol. 2003;185:1153–1160. doi: 10.1128/JB.185.4.1153-1160.2003. [DOI] [PMC free article] [PubMed] [Google Scholar]
- 17.Park J.K., Morita K., Fukumoto I., Yamasaki Y., Nakagawa T., Kawamukai M., Matsuda H. Purification and characterization of the chitinase (ChiA) from Enterobacter sp. G-1. Biosci Biotechnol Biochem. 1997;61:684–689. [Google Scholar]
- 18.Patil S.R., Ghormonde V., Deshpande M.V. Chitinolytic enzymes: an exploration. Enzyme Microb Technol. 2000;26:473–483. doi: 10.1016/S0141-0229(00)00134-4. [DOI] [PubMed] [Google Scholar]
- 19.Reissig J.L., Strominger J.L., Leroir luis F. A modified colorimetric method for the estimation of N-acetylamino sugars. J Biol Chem. 1955;217:959–966. [PubMed] [Google Scholar]
- 20.Sitrit Y., Vorgias C.E., Chet I., Oppenheim A.B. Cloning and primary structure of the chiA gene from Aeromonas caviae. J Bacteriol. 1995;177:4187–4189. doi: 10.1128/jb.177.14.4187-4189.1995. [DOI] [PMC free article] [PubMed] [Google Scholar]
- 21.Vyas P.R., Deshpande M.V. Enzymatic hydrolysis of chitin by Myrothecium verrucaria chitinase complex and its utilization to produce SCP. J Gen Appl Microb. 1991;37:267–275. doi: 10.2323/jgam.37.267. [DOI] [Google Scholar]
- 22.Yamada H., Imoto T. A convenient synthesis of glycol chitin, a substrate of lysozyme. Carbohydr Res. 1981;92:160–162. doi: 10.1016/S0008-6215(00)85993-5. [DOI] [PubMed] [Google Scholar]