Abstract
The TGF-β superfamily is conserved throughout metazoan, and its members play essential roles in development and disease. TGF-β has also been implicated in adult neural plasticity. However, the underlying mechanisms are not well understood. Here we report that DBL-1, a Caenorhabditis elegans TGF-β homolog known to control body morphology and immunity, is essential for aversive olfactory learning of potentially harmful bacteria food. We show that DBL-1 generated by the AVA command interneurons, which are critical for sensorimotor responses, regulates aversive olfactory learning, and that the activity of the type I TGF-β receptor SMA-6 in the hypodermis is needed during adulthood to generate olfactory plasticity. These spatial and temporal mechanisms are critical for the DBL-1 signaling to achieve its diverse functions in development and adult neural plasticity. Interestingly, aversive training decreases AVA calcium response, leading to an increase in the DBL-1 signal secreted from AVA, revealing an experience-dependent change that can underlie the role of TGF-β signaling in mediating plasticity.
Keywords: experience-dependent secretion, molecular and cellular mechanisms for TGF-beta pathway in learning
TGF-β ligands are secreted molecules that play critical roles in cell growth, differentiation, and death. TGF-βs initiate signaling by binding to type I and type II serine/threonine kinase receptors, which activate cytoplasmic SMAD proteins to regulate gene transcription (1). TGF-βs have also been implicated in adult neural plasticity (2–5). For example, in Aplysia, treating isolated pleural-pedal ganglia with human TGF-β1 induces long-term facilitation (5). In mice, removal of chordin, an extracellular inhibitor of BMPs (TGF-β family members), decreases the acquisition time for spatial learning in a Morris water maze (4). However, our understanding of TGF-β pathways in adult neural plasticity remains preliminary.
Caenorhabditis elegans is a great model organism for further exploring this question. The “wiring diagram” of the 302 neurons of its nervous system (6, 7) provides a structural basis for characterizing the function of TGF-β pathways that underlie learning. Two C. elegans TGF-β ligands have been well characterized: DAF-7 and DBL-1. Whereas DAF-7 regulates multiple physiological traits, including diapause stage (dauer) entry, metabolism (8–11), DBL-1 controls body morphology, innate immunity, and reproductive aging (9, 12, 13). Here we report that the activity of DBL-1 is critical for adult animals to learn to avoid the smell of pathogenic bacteria. DBL-1 produced by the AVA command interneurons mediates learning, and the type I TGF-β receptor SMA-6 acts primarily in the hypodermis during adulthood to facilitate olfactory plasticity. These spatial and temporal mechanisms are critical for the diverse functions of the DBL-1/SMA-6 pathway. Interestingly, aversive training with pathogenic bacteria represses AVA activity measured by G-CaMP, and inhibition of AVA leads to an increased amount of DBL-1 secreted by AVA, revealing an experience-dependent change of DBL-1 that may underlie its role in neural plasticity.
Results
C. elegans TGF-β/DBL-1 Is Essential for Aversive Olfactory Learning in Adult Animals.
C. elegans feeds on bacteria and detects odorants produced by bacteria (14). Whereas many bacteria in its habitat can be safely ingested by C. elegans, some strains are pathogenic, and ingestion of these stains could cause a slow death over several days (15). Previously we showed that adult C. elegans is able to learn to avoid the smell of pathogenic bacteria after ingestion (16, 17). Here we quantified this learning ability using a short-term training procedure. We raised animals under standard conditions until adulthood, then transferred half of the animals onto a control plate containing the benign bacteria strain Escherichia coli OP50 and the other half onto a training plate containing the pathogenic strain Pseudomonas aeruginosa PA14. After 4 h, the naive animals on the control plate and the trained animals exposed to PA14 were tested in parallel to determine their preferences between OP50 and PA14 in the choice assays similar to the chemotaxis assays with odorants (14) (Fig. 1A). Animals orient their locomotion toward a small lawn of freshly resuspended OP50 or PA14 culture over a distance, likely by detecting volatiles, “the smell,” produced by the bacteria. This results in accumulation of the animals on either bacteria lawn over a time course of 1–2 h, and the choice between OP50 and PA14 was measured using a choice index. A positive choice index indicates a preference for PA14, and a negative choice index indicates a preference for OP50 (Fig. 1 A and B and Fig. S1A).
We found that naive adult animals that were never exposed to PA14 slightly preferred or were indifferent to the smell of PA14, whereas animals trained with a 4-h exposure to PA14 strongly avoided the strain (Fig. 1 A and B and Fig. S1A). The induced avoidance of PA14 was robust whether OP50 was used as a control in two-choice assays or several different bacterial strains were used as controls in multiple-choice assays (16). The learning index was the difference between the choice indices of the naive and trained animals, and a positive learning index indicates a learned olfactory aversion to PA14 (Fig. 1 B and C). Similarly, short exposure to another pathogenic bacterium, Serratia marcescens ATCC 13880, induced an aversive learning in adults. In contrast, exposure to nonpathogenic bacteria, such as Pseudomonas fluorescens and P. aeruginosa PAK, did not cause olfactory aversion (Fig. 1C). These results demonstrate that a short-term training with pathogenic bacteria induces aversive olfactory learning in adult animals.
Next, using the short-term training with the pathogenic bacterium PA14, we found that two loss-of-function mutations in dbl-1, dbl-1(nk3) and dbl-1(wk70) (18, 19), disrupted aversive learning (Fig. 1D). Introduction of the dbl-1 genomic DNA rescued the defects of dbl-1(nk3) mutant animals in learning and body length (Fig. 2 A, G, and H). dbl-1(nk3) mutant animals were also defective in learning to avoid the pathogen S. marcescens 13880 (Fig. S1B). Meanwhile, the chemotactic responses of dbl-1(nk3) mutant animals to odorants detected by the primary olfactory neurons (14) are similar to wild-type animals, or even stronger toward octanol (Fig. S2). Thus, DBL-1 is required for aversive olfactory learning of pathogenic bacteria in C. elegans. DBL-1 signals through the type I receptor SMA-6 and the type II receptor DAF-4 to control body morphology (20). We found that sma-6(e1482), sma-6(wk7) (21), daf-4(m63), and mutant animals of SMAD proteins, sma-2(e502), sma-3(e491), and sma-4(e792) (9, 22), were all defective in learning avoidance of PA14 (Fig. 1D). The residual learning ability in the sma-6(e1482) may be due to the weak mutation in the allele (21). Thus, the TGF-β/DBL-1 pathway is essential for aversive olfactory learning of pathogenic bacteria in adult animals.
DBL-1 Produced by the AVA Command Interneurons Promotes Aversive Olfactory Learning.
Next we sought the neuronal source of the DBL-1 signal for learning regulation. First, using transcriptional and translational reporters (Fig. S3A), we confirmed dbl-1 expression in the nervous system, including ventral nerve cord (VNC) motor neurons (18, 19). Interestingly, we also identified dbl-1 expression in the AVA command interneurons on the basis of the anatomical position and overlapping expression of dbl-1 with the glutamate receptor nmr-1 (23) (Fig. 2B and Fig. S3B).
The AVA interneurons are important to initiate backward movements (23–26). We found that expression of the dbl-1 coding region using the nmr-1 promoter, whose expression overlaps with dbl-1 expression only in AVA, significantly rescued the learning defect in dbl-1(nk3) mutant animals (Fig. 2 C and G). To selectively express dbl-1 in AVA neurons, we used the Cre-Lox recombination system (27) by expressing two transgenes, flp-18p::nCre and nmr-1sp::LoxStopLox::dbl-1, which direct Cre-mediated deletion of the Stop signal only in AVA neurons (Fig. S3C). The AVA-specific expression was validated by the coexpression of the flp-18p::nCre and nmr-1sp::LoxStopLox::gfp constructs (Fig. S3 D and E). Consistently, AVA-specific expression of dbl-1 rescued the learning defect of dbl-1(nk3) mutant animals (Fig. 2D). We also tested the effect of dbl-1 expression in the VNC motor neurons. The unc-17 promoter is active in many neurons, including those in VNC, but not AVA; and the acr-2 promoter expresses mainly in the dbl-1–expressing VNC motor neurons (28) (Fig. 2G). Neither unc-17p::dbl-1 nor acr-2p::dbl-1 significantly improved the learning ability of dbl-1(nk3) animals (Fig. 2 E and F). Thus, the DBL-1 signal produced by the AVA interneurons mediates aversive olfactory learning.
DBL-1 also regulates body morphology and immunity. dbl-1 mutant animals are smaller and more susceptible to infection (13, 18, 19, 29). We found that dbl-1 expression in AVA using the nmr-1 promoter rescued only the learning defect of dbl-1(nk3) mutant animals and had no obvious effect on body length or resistance to PA14 (Fig. 2 C, H, and I and Table S1). Killing of C. elegans by PA14 correlates with the accumulation of PA14 in the gut (15). Consistently, expression of dbl-1 with nmr-1p could not rescue the increased accumulation of DsRed-labeled PA14 in the gut of dbl-1(nk3) animals (Fig. S4A). In contrast, expressing dbl-1 in mutant animals using the unc-17 promoter restored body length and resulted in stronger resistance to PA14 than in wild-type animals without significantly improving their learning ability (Fig. 2 E, H, and I and Table S1). Thus, DBL-1 ligands produced by different neurons regulate distinct physiological processes.
DBL-1 Signals to the Hypodermis to Direct Aversive Olfactory Learning.
DBL-1 acts on the type I receptor SMA-6 in the hypodermis to regulate body length (30). We find that SMA-6 is also required for aversive learning of PA14 (Fig. 1D), and expression of a wild-type sma-6 transgene rescued the learning defect of sma-6(wk7) mutant animals (Fig. 3A). By examining the expression pattern of a GFP reporter of sma-6, we confirmed expression of sma-6 in the pharynx, intestine, and hypodermis (30). We also identified sma-6 expression in the ASI sensory neurons (Fig. S4B), using DiI that stains several ciliated neurons, including ASI.
Next, we expressed wild-type SMA-6 selectively in the hypodermis, intestine, or ASI neurons in sma-6(wk7) mutant animals using cell-specific promoters and assessed its ability to rescue the learning defect (Fig. 3G). We found that expression of sma-6 either in the hypodermis [dpy-7p::sma-6(low), col-12p::sma-6] or in the ASI neurons (str-3p::sma-6) fully rescued the learning defect of sma-6(wk7) animals (Fig. 3 B–D). In contrast, expression of sma-6 in the intestine (elt-2p::sma-6, ges-1p::sma-6) had no detectable effect on learning (Fig. 3 E and F). Thus, the activity of SMA-6 receptor in either the hypodermis or ASI neurons is sufficient for aversive olfactory learning. Next, we blocked SMA-6 signaling in these regions using SMA-6(∆k), a dominant-negative isoform that lacks the intracellular kinase domain. Mutations disrupting the kinase domain of TGF-β receptors inhibit signal transduction of the corresponding pathway (31). Expression of sma-6(∆k) using the hypodermis-specific promoter dpy-7 in the wild-type animals resulted in decreased body length, similar to the phenotype of sma-6(wk7) mutant animals (Fig. S4C), confirming the dominant-negative effect of SMA-6(∆k). Consequently, we found that blocking SMA-6 signaling in the hypodermis [col-19p::sma-6(∆k)] (32) of wild-type animals strongly impaired aversive learning, whereas expression of sma-6(∆k) in ASI [str-3p::sma-6(∆k)] had no detectable effect (Fig. 3 H and I). Thus, the hypodermis is the primary functional site of SMA-6 in aversive olfactory learning.
DBL-1/SMA-6 Pathway Acts in Adults to Facilitate Aversive Olfactory Learning.
We next investigated when the DBL-1 pathway is required for the adult-stage learning. We blocked DBL-1 signal transduction in wild-type animals by expressing the dominant-negative SMA-6(∆k) right before adult stage using the heat shock-inducible promoter hsp16.2p. We found that the transgenic animals were completely defective in aversive learning, whereas the nontransgenic siblings that went through the same heat shock treatment were normal (Fig. 4A). Conversely, when we expressed wild-type SMA-6 in the hypodermis of sma-6(wk7) mutant animals only during adulthood using the adult-specific promoter col-19p (32), the learning defect was significantly rescued (Fig. 4B). Thus, the function of the DBL-1/SMA-6 pathway during adult stage is critical for aversive olfactory learning.
Because SMA-6 also acts in the hypodermis to control body size and pathogen resistance (13, 30, 33), we asked how the DBL-1/SMA-6 signaling regulates these diverse physiological traits. We found that a low level of SMA-6 expression in the hypodermis [dpy-7p::sma-6(low)] was sufficient to rescue the defect of sma-6(wk7) animals in learning (Fig. 3B) but not sufficient to rescue their defect in pathogen resistance or body length; these phenotypes required a higher level of SMA-6 expression in hypodermis [dpy-7p::sma-6(high)] for rescue (Fig. 4 C–E and Table S1). Consistently, only a higher level of hypodermal SMA-6 was able to rescue the increased accumulation of PA14/DsRed in the gut of sma-6(wk7) animals (Fig. S4A). In addition, adult-stage expression of SMA-6 in the hypodermis (col-19p::sma-6) exerted no obvious effect on body length or pathogen resistance, although it significantly rescued the learning defect in sma-6(wk7) animals (Fig. 4 B, C, and E and Table S1). These results suggest that dosage and temporal patterns are important for the DBL-1/SMA-6 pathway to mediate diverse functions.
Aversive Training Decreases AVA Neuronal Calcium Response.
To understand how the DBL-1 signal from AVA mediates learning, we examined whether aversive training alters AVA neuronal activity. We measured the calcium response of AVA neurons using intracellular calcium imaging in transgenic animals that expressed the calcium-sensitive fluorescent protein G-CaMP with the nmr-1 promoter (34). These transgenic animals display normal learning ability and locomotory responses (Fig. S5 A and B). Because calcium influx of AVA is correlated with the initiation of spontaneous backward movements (26, 35, 36), we recorded AVA calcium dynamics of animals in the nematode growth medium (NGM) buffer using a microfluidic device that allows generation of body waves, which result in forward or backward movements (36). We measured the G-CaMP fluorescence intensity in AVA in naive and PA14-trained animals and calculated the rate of intensity change (Fig. 5A). We determined calcium influx events in AVA by identifying peaks of intensity change rate that were above a given threshold. Interestingly, trained animals displayed significantly lower frequencies of calcium influx events in AVA than naive animals over a range of thresholds (Fig. 5 B and C). To control for motion artifacts, we used the same procedure to quantify GFP signal in AVA and did not detect obvious peaks (“Control” in Fig. 5C). Previously we showed that training with PA14 did not alter sensory-evoked calcium responses in the AWB and AWC sensory neurons (17). These results suggest that aversive training reduces AVA calcium response.
Because animals lacking AVA neurons initiate fewer reversals on food (23–25), we confirmed the training-dependent decrease in AVA calcium response by measuring reversal rates. We quantified short reversals (one or two head swings), long reversals (more than two head swings), and omega turns (animal bends its body into a Ω shape). We found that compared with naive animals on OP50, trained animals generated fewer reversals on PA14 (Fig. 5D), which may facilitate the leaving and/or avoiding PA14 bacterial lawn in trained animals. In addition, the reduction in reversal rates was not observed on the nonpathogenic derivative strain PA14 gacA− (Fig. 5E). These results further indicate that aversive training decreases AVA calcium response.
Aversive Training Increases the DBL-1 Signal Secreted by the AVA Interneurons.
The above observation prompted us to investigate the effect of training on AVA production of DBL-1. First, we found that 4- to 6-h training increases the expression of the dbl-1p::mcherry transcriptional reporter in AVA (Fig. 6A). This increase was not observed with 2-h exposure or in VNC motor neurons (Fig. S5C), suggesting that the increase in dbl-1 transcription is contingent on continuing training beyond the initial contact of the bacteria and is specific to AVA. Next, we examined whether the DBL-1 signal secreted by AVA neurons is also modulated by training using a translational reporter gfp::dbl-1. The reporter is functional because expression of gfp::dbl-1 using the dbl-1 promoter rescues both the body length and learning defects of dbl-1(nk3) mutant animals (Fig. S5 D and E). We expressed the functional GFP::DBL-1 protein only in AVA neurons using the Cre-Lox strategy as in the dbl-1 rescue experiment (Fig. S5F). We first confirmed that the promoters used to drive AVA-specific expression of GFP::DBL-1, nmr-1sp, and flp-18p were not regulated by training by measuring the expression of their GFP transcriptional reporters (Fig. 6B). Next, we measured the amount of secreted GFP::DBL-1 by quantifying the intensity of green fluorescent patches inside coelomocytes. Coelomocytes are scavenger cells that take up secreted proteins from the pseudocoelomic space through endocytosis (37). Thus, the fluorescent patches of GFP::DBL-1 that accumulate in the coelomocytes (Fig. 6C) indicate the level of secreted GFP::DBL-1. In this study, we also measured the mean fluorescence intensity of the entire coelomocytes and obtained similar results (Figs. 6 and 7 and Fig. S6). We found that, compared with naive animals, animals trained with PA14 showed significantly stronger GFP::DBL-1 fluorescence in coelomocytes (Fig. 6D and Fig. S6A). Similar up-regulation was observed in another two independently generated transgenic lines (Fig. S6 B and C). Furthermore, the expression of the translational fusion dbl-1p::gfp::dbl-1 decreased in AVA after training, consistent with an increase in the secretion of DBL-1 from AVA (Fig. 6E). As a control, we quantified the fluorescent signals produced by a translational fusion lad-2p::ss-mcherry. lad-2 encodes a cell adhesion molecule expressed in several neurons (38), and fusing the LAD-2 signal peptide (ss) with mCherry produced a secreted protein. There was no difference in the fluorescent signals of lad-2p::ss-mcherry either in the lad-2–expressing head neurons or in coelomocytes between naive and trained animals (Fig. S6 D and E), suggesting that training does not significantly alter the uptake function of coelomocytes. Together, these results demonstrate that aversive training causes an increase in the amount of DBL-1 ligand secreted by the AVA neurons.
To further assess the training effect on DBL-1 signaling, we examined the downstream activity in the hypodermis, the target tissue of DBL-1 in aversive olfactory learning, using a gfp reporter of DBL-1 activity, RAD-SMAD (39). RAD-SMAD expression is positively regulated by DBL-1 and is found in multiple tissues, including the intestine and hypodermis (39). We quantified RAD-SMAD level in the hypodermis of transgenic animals that expressed DBL-1 only in AVA neurons in the dbl-1(nk3) background. To control for individual variations and unspecific effects, we normalized the hypodermal RAD-SMAD signal by the intestinal signal of the same animal. We found that training with PA14 enhanced RAD-SMAD expression in the hypodermis (Fig. 7A). In contrast, exposure to a nonvirulent Pseudomonas strain, PAK, which does not induce aversive learning (Fig. 1C), did not generate a similar increase (Fig. S6F). Because AVA is the only source of DBL-1 in this condition, this result supports that aversive training with PA14 increases the DBL-1 signal from AVA neurons.
Although training decreases AVA neuronal activity measured by G-CaMP signal, it increases AVA-secreted DBL-1 signal. Thus, we tested whether there was a causal link between these two effects. We inhibited AVA in wild-type animals by selectively expressing an activated form of a potassium channel twk-18(gf) (40) in AVA. We observed strongly decreased reversal rates in these transgenic animals, confirming the inhibition of AVA (Fig. 7B) (25). Strikingly, in the absence of training this TWK-18–mediated inhibition of AVA generated a significant increase in the AVA-secreted GFP::DBL-1 signal, as measured using the coelomocyte-uptake assay (Fig. 7C and Fig. S6G). These results demonstrate that inhibition of AVA could lead to an increased amount of DBL-1 signal secreted by the AVA interneurons.
Discussion
Growth factors involved in early development also mediate adult neural plasticity (41, 42). The TGF-β superfamily regulates development and disease in a conserved manner. Here we elucidate an essential requirement for the pathway of C. elegans TGF-β homolog DBL-1 in regulating aversive olfactory learning. Occasionally mutations in DBL-1 pathway also affect the naive preference, suggesting potential function of the pathway under the naive condition. Our results demonstrate the specific role of DBL-1 produced by the AVA command interneurons in facilitating learning by acting through the SMA-6 receptor in the adult hypodermis. The cell bodies of AVA neurons are located in the head, and their processes run along the length of the animal, embedded in the hypodermis. Although we cannot completely exclude the possibility that DBL-1 produced by some other cells can also act on the hypodermal SMA-6 through diffusion in pseudocoelom, our results suggest that the DBL-1 secreted by AVA neurons activates the SMA-6 receptor in the surrounding hypodermis to elicit secondary signaling to induce aversive learning. DBL-1 also acts via the hypodermis to regulate body length and pathogen resistance (9, 13, 30). Thus, the hypodermis may act as a general target tissue for DBL-1 signals.
Command interneurons are necessary and sufficient to generate defined behavioral outputs. In the mollusc Pleurobranchaea, pairing food with shock results in postsynaptic modulation of the PCN command neurons, which activate feeding upon food stimuli (43). Here we demonstrate the requirement of the AVA command interneurons as the source of DBL-1 that is needed for a learning behavior. Interestingly, aversive training with PA14 decreases AVA neuronal calcium signal but increases the amount of DBL-1 secreted by AVA. In the rat supraoptic nucleus, administration of α-melanocyte–stimulating hormone decreases the electrical activity of oxytocin-containing neurons and the axonal release, while increasing the dendritic release of oxytocin (44). One plausible physiological consequence of the training-dependent change in secreted DBL-1 would be an enhanced signal to SMA-6, which could result in modulation of a secondary signal, leading to behavioral changes (Fig. 7D).
TGF-β pathways regulate diverse physiological processes. Recent studies demonstrated that individual TGF-βs can activate different receptor complexes and downstream effectors to elicit distinct responses (1). Our results argue that TGF-β secreted by different cells/tissues at different times can induce distinct physiological effects. Elucidation of the mechanisms used by target tissues to interpret these diverse TGF-β signals awaits future investigation.
Materials and Methods
SI Materials and Methods provides full experimental details. For the promoters used in transgenic lines, we found no significant impact of their expression on learning using the corresponding fluorescent reporters and the transformation marker (Table S2). The aversive olfactory training and learning assays were performed similarly as previously described (16, 17). For transgenic lines, the transgenic and nontransgenic siblings were trained on the same plates, their learning ability was measured in the same chemotaxis assays, and the results were scored by the experimenter before the genotypes were identified according to the expression of a fluorescent transformation maker in transgenic animals. The results of all of the choice indices are in Table S3.
Supplementary Material
Acknowledgments
We thank the Caenorhabditis Genetics Center, which is funded by the National Institutes of Health (NIH) National Center for Research Resources, for strains; Wellcome Trust Sanger Institute for DNA clones; Fred Ausubel for PA14/DsRed; Edward Soucy and Parker Porfilio for technical support; Queelim Ch’ng for suggestions on imaging coelomocytes; Junichi Nakai for pN1-G-CaMP; Jingyi Yu for the flp-18p and unc-17p constructs; and Xu Zhou for calcium imaging analysis. This work was supported by the Esther A. and Joseph Klingenstein Fund, the March of Dimes Foundation, the Alfred P. Sloan Foundation, The John Merck Fund, and by NIH Grant R01 DC009852 (to Y.Z.).
Footnotes
The authors declare no conflict of interest.
*This Direct Submission article had a prearranged editor.
This article contains supporting information online at www.pnas.org/lookup/suppl/doi:10.1073/pnas.1205982109/-/DCSupplemental.
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