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. Author manuscript; available in PMC: 2013 Oct 5.
Published in final edited form as: J Org Chem. 2012 Sep 26;77(19):8648–8656. doi: 10.1021/jo3016192

Palladium-Catalyzed Annulation of Arynes by ortho-Halobenzamides: Synthesis of Phenanthridinones

Chun Lu 1, Anton V Dubrovskiy 1, Richard C Larock 1,
PMCID: PMC3490708  NIHMSID: NIHMS410817  PMID: 23013049

Abstract

graphic file with name nihms410817f2.jpg

The palladium-catalyzed annulation of arynes by substituted o-halobenzamides produces N-substituted phenanthridinones in good yields. This methodology provides this important heterocyclic ring system in a single step by simultaneous C-C and C-N bond formation, under relatively mild reaction conditions, and tolerates a variety of functional groups.

Introduction

Phenanthridinones are important subunits found in many compounds possessing interesting biological and pharmaceutical activities. They have been used as PARP inhibitor anticancer drugs,1 and as neurotrophin activity enhancers for the treatment of nerve diseases.2 One of the traditional approaches for the synthesis of phenanthridinones is through reductive cyclization of the corresponding nitro-carbonyl-biphenyls.3 However, traditional preparations of the starting nitro-carbonyl-biaryls by Ullmann coupling or the nitration of biaryls4 require either harsh reaction conditions or exotic functionalized arenes, significantly limiting the broad application of this approach. Other common approaches to phenanthridinones include the Schmidt/Beckmann rearrangement of fluorenone derivatives that are not all that readily available,4g,5 and the photochemical rearrangement of 2-halobenzamides.6 There are also reports of phenanthridinone synthesis involving aryne generation under harsh basic conditions and subsequent intramolecular cyclization.7

Transition metal-catalyzed annulation reactions are tremendously valuable in organic synthesis.8 Among such processes, palladium-mediated reactions are by far the most powerful in constructing carbocycles and heterocycles,9 due to the high efficiency with which they construct C-C and C-X (X = O, N) bonds10 and their high compatibility with functional groups. For example, some phenanthridinone derivatives have been synthesized by palladium-catalyzed intramolecular or intermolecular cyclization processes of aryl halides and amides,11 or by oxidative ortho-arylation of benzanilides.12

Since a convenient approach to aryne generation by the fluoride-induced 1,2-elimination of o-(trimethylsilyl)aryl triflates was first reported,13 arynes have attracted considerable attention.14 The high electrophilicity of arynes has been used extensively in the construction of many heteroaromatic structures via annulation reactions.15 To take further advantage of aryne chemistry, many metal-catalyzed coupling16 and annulation reactions17 of arynes have been explored. In our group, we have been especially interested in the palladium-catalyzed annulation of arynes.18

Herein, we report the palladium-catalyzed annulation of arynes by substituted o-halobenzamides to produce N-substituted phenanthridinones in good yields. In this reaction, C-C and C-N bonds are formed simultaneously to generate this important heterocyclic ring system.

Results and Discussion

Optimization Studies

We attempted to optimize the reaction of N-ethyl-2-bromobenzamide (1a) and the benzyne precursor o-(trimethylsilyl)phenyl trifluoromethanesulfonate (2a) in 4:1 toluene/acetonitrile with CsF as the fluoride source (Table 1). In all cases, the cyclotrimerization side product 4a19 and the desired benzyne annulation product 3a were observed.

Table 1.

Optimization of the Pd-Catalyzed Annulation of Benzynea

graphic file with name nihms410817t1.jpg
entry ligand (mol %) additive
(equiv)
solvent ratio
(toluene/MeCN)
% yield of 3ab
1 -------- -------- 4:1 10
2 PPh3 (10) -------- 4:1 13
3 P(o-tolyls)3 (10) -------- 4:1 50
4 dppm (10) -------- 4:1 66
5 dppe (10) -------- 4:1 30
6 dppf (10) -------- 4:1 25
7 L (10)c -------- 4:1 56
8 dppm (5) -------- 4:1 53
9 dppm (10) Na2CO3 (1) 4:1 73
10 dppm (10) K2CO3(1) 4:1 70
11 dppm (10) Cs2CO3(1) 4:1 67
12 dppm (10) Na2CO3 (2) 4:1 57
13 dppm (10) Na2CO3 (1) 3:1 52
14 dppm (10) Na2CO3 (1) 6:1 49
15 dppm (10) Na2CO3 (1) 4:1 50d
16 dppm (10) Na2CO3 (1) 4:1 60e
a

All reactions were run using substrate 1a (0.25 mmol), 5 mol % of Pd(OAc)2, 2.0 equiv of 2a, 5.0 equiv of CsF, 5 ml of solvent at 110 °C for 16–24 h, unless otherwise specified.

b

Isolated yield.

c

o-(Dicyclohexyl-phosphino)biphenyl.

d

The reaction was conducted at 90 °C for 12 h, at which time the Pd had precipitated out.

e

1.6 Equiv of 2a and 4.0 equiv of CsF were employed.

Optimization work was conducted with respect to different palladium catalysts, ligands, solvent ratios and temperatures (Table 1). Without any ligand, palladium black precipitated out very quickly with only a trace amount of the desired product being formed and the aryl halide 1a was left in large amounts (entry 1). Simple triphenylphosphine ligand did not improve the yield (entry 2). Both tri(o-tolyl)phosphine and o-(dicyclohexylphosphino)biphenyl ligands increased the yield to ~50% (entries 3 and 7). Several bidentate ligands have also been examined (entries 4–6). Among them, dppm proved the most efficient, producing lactam 3a in a 66% yield, although 10 mol % of ligand seemed necessary to obtain a decent yield (entry 8). Besides examining the effect of the ligand on the yield, several bases have also been tested in this reaction (entries 9–12). The results indicate that with 1.0 equiv of Na2CO3, a 73% yield of the desired product can be achieved (entry 9). Other bases gave lower yields (entries 10–11). Based on our previous experience, the solvent can often prove critical for palladium-catalyzed aryne reactions, mostly because the aryne is generated at substantially different rates in different solvents.17 With a toluene/acetonitrile mixed solvent and CsF as the fluoride source, benzyne is generated more slowly in mixtures with less acetonitrile, because CsF has a lower solubility in toluene. Thus, the solvent ratio was examined and 4:1 toluene/acetonitrile afforded the best result (compare entries 9, 13 and 14). With a 3:1 ratio, more of the trimer 4a is formed; with a 6:1 ratio, the benzyne is generated too slowly, giving a lower yield of the desired product.

An effort was made to lower the temperature and the benzyne precursor loading (entries 15 and 16), but it appears that 110 °C and 2 equiv of the benzyne precursor, plus 5 equiv of CsF, are necessary in order to obtain a high yield. Several other palladium catalysts, including PdCl2(MeCN)2 (63%), Pd(dba)2 (65%) and Pd(PPh3)4 (61%), have also been examined in this process, but none proved better than Pd(OAc)2. We have chosen the reaction conditions reported in entry 9 of Table 1 as our optimal conditions.

Based on our experimental results and previous experience with related processes,18 we propose that this phenanthridinone synthesis proceeds through either of the possible pathways shown in Scheme 1.

Scheme 1. Tentative Mechanisms.

Scheme 1

One possible pathway proceeds by the oxidative cyclization of Pd(0) with the aryne generated from the silyl triflate to form the palladacycle I (path a).20 Oxidative addition of 1a to this palladacycle forms the Pd(IV) intermediate II. Reductive elimination gives rise to the arylpalladium(II) intermediate III. However, we cannot rule out the possibility that Pd(0) inserts directly into the C-Br bond of 1a to form the intermediate IV, which then undergoes carbopalladation of the aryne to give rise to intermediate III21 (path b). Regardless of how the intermediate III is formed, under the basic conditions, it is expected to cyclize to the intermediate V. Finally, through reductive elimination the desired product 3a can be generated, alongside Pd(0), which can reenter the catalytic cycle. There does not appear to be any particular evidence favoring either of these pathways.

Reaction Scope and Limitations

To test the scope and limitations of this reaction, we have examined a variety of substituted 2-halobenzamides and the results are summarized in Table 2. Different amide nitrogen substituents, including alkyl (entries 1–4), allyl (entry 5), phenyl (entry 6) and benzyl groups (entries 7–10), have been examined. Among them, excellent yields were achieved for N-primary and secondary alkyl (entries 1–3) substituted amides, as well as N-benzyl substituted amides (entries 7–10). The analogous amide with an N-tBu (entry 4) afforded a lower yield presumably due to the steric hindrance of the tBu group. The presence of an N-allyl group (entry 5) also caused complications - the reaction looked messier on the TLC plate than the parent system (1a) with a resulting lower yield. Aryl-substituted amide 1f produced some uncharacterized products, which overlapped with the starting amide left on the TLC plate (entry 6). The reaction was also performed using the 2-iodobenzamide 1k (entry 11), where a much lower yield was obtained than the corresponding bromobenzamide 1g. Although for most palladium-catalyzed reactions of aryl halides, aryl iodides provide better results than the corresponding aryl bromides, because the oxidative addition of Pd(0) to the aryl halide is easier and faster (see the later mechanistic discussion), there are several publications where the same halide effect as seen here has been reported and mechanistic studies on such reactions have been conducted.22 The reason for this halogen effect is not clear. However, we have observed that palladium precipitates out more quickly with a lower conversion and more side products in the reaction of 1k than in the reaction of 1g.

Table 2.

Pd-Catalyzed Annulation of Benzyne 2aa

graphic file with name nihms410817t2.jpg
entry substrate % yield
of 3b
entry substrate % yield
of 3b
1 graphic file with name nihms410817t3.jpg (3a) 73 14 graphic file with name nihms410817t4.jpg (3n) 74
2 graphic file with name nihms410817t5.jpg (3b) 70 15 graphic file with name nihms410817t6.jpg (3o) 74
3 graphic file with name nihms410817t7.jpg (3c) 87 16 graphic file with name nihms410817t8.jpg (3p) 70
4 graphic file with name nihms410817t9.jpg (3d) 64 17 graphic file with name nihms410817t10.jpg (3q) 67
5 graphic file with name nihms410817t11.jpg (3e) 65 18 graphic file with name nihms410817t12.jpg (3r) 52
6 graphic file with name nihms410817t13.jpg (3f)--c 19 graphic file with name nihms410817t14.jpg (3s) 65
7 graphic file with name nihms410817t15.jpg (3g) 82 20 graphic file with name nihms410817t16.jpg (3t) 79
8 graphic file with name nihms410817t17.jpg (3h) 77 21 graphic file with name nihms410817t18.jpg (3u) 70
9 graphic file with name nihms410817t19.jpg (3i) 75 22 graphic file with name nihms410817t20.jpg (3v) 55
10 graphic file with name nihms410817t21.jpg (3j) 83 23 graphic file with name nihms410817t22.jpg (3w) 36
11 graphic file with name nihms410817t23.jpg (3g) 38 24 graphic file with name nihms410817t24.jpg (3x) 0
12 graphic file with name nihms410817t25.jpg (3l) 84 25 graphic file with name nihms410817t26.jpg (3y) 0
13 graphic file with name nihms410817t27.jpg (3m) 79
a

Representative procedure: 1 (0.25 mmol), 2.0 equiv of 2, 5.0 equiv of CsF, 5 mol % Pd(OAc)2, 10 mol % dppm, 1.0 equiv of Na2CO3 in 5 ml of 4:1 toluene/MeCN at 110 °C for 16–24 h.

b

Isolated yield.

c

An unknown mixture was generated with products overlapping with the starting material 1d on the TLC plate.

To further test the scope and limitations of the reaction, we examined a variety of 2-bromobenzamides with various functional groups (entries 12–22). Amides with slightly electron-donating methyl groups at the 3 (entry 14), 4 (entry 12), and 5 (entry 13) positions generally afforded excellent yields of above 70%, although 1n provided a slightly lower yield than the others presumably due mainly to the steric hindrance of the methyl group during oxidative addition of the carbon-halogen bond to the palladium catalyst. Strong electron-donating methoxy groups also did not lower the yield significantly and yields above 70% were generated from 1o and 1p, which suggested that the oxidative addition of the aryl bromide to Pd(0) is not very difficult under these reaction conditions. Halogens, such as F (entries 19 and 20) and Cl (entry 17), were well tolerated in these reactions, providing good yields of the corresponding amides.

o-Bromobenzamides with electron-withdrawing groups, including CF3 (entry 18), NO2 (entry 21) and an amide group (entry 22), were also tested and lower yields were obtained when compared to 1g. The reason for this decrease can be explained as follows. Although the electron-withdrawing nature of these functional groups facilitates oxidative addition of the carbon-bromine bond in the amide to Pd(0), it at the same time decreases the nucleophilic nature of the nitrogen in the amide, which is critical for the cyclization step (see the later mechanistic discussion).

In addition to these N-benzyl-2-bromobenzamide derivatives, the pyridine-derived amide 1w has also been examined, but only a 36% yield of the desired product was isolated, which may be caused by deactivation of the Pd catalyst through strong coordination of the nitrogen in the pyridine to Pd.

This reaction was also applied to 2-bromobenzamide (1x, entry 24) and N,N-dimethyl-2-bromobenzamide (1y, entry 25). Both amides 1x and 1y remained in the reaction system in very large amounts after the reaction and neither of the desired products was observed. The reason for the failure of these two reactions may not, however, be the same. In the reaction of amide 1x, strong coordination of the NH2 group with the Pd in either complex III or IV (see Scheme 1) may inhibit the cyclization; while, in amide 1y, two methyl groups on the nitrogen prohibit nucleophilic attack of the nitrogen on the Pd in complex III (see the step from III to V in Scheme 1).

In addition to the silylphenyl triflate 2a, other aryne precursors have also been examined as an annulation partner in our methodology (Table 3). The 4,5-dimethylbenzyne precursor 2b, the 4,5-dimethoxybenzyne precursor 2c and the 4,5-difluorobenzyne precursor 2d have all been examined under our annulation conditions. They formed the expected annulation products 3gb, 3gc and 3gd respectively, not surprisingly, with lower yields compared to benzyne precursor 2a (Table 2, entries 1–3). This may be due to either the slower rate of generation of the arynes or the lack of stability of these arynes, as has been suggested by earlier work in our group.18d,e

Table 3.

Investigation of Different Arynes in the Pd-Catalyzed Annulation of o-Halobenzamide 1ga

graphic file with name nihms410817t28.jpg
entry aryne % yield of 3b
1 graphic file with name nihms410817t29.jpg (3gb) 50
2 graphic file with name nihms410817t30.jpg (3gc) 46
3 graphic file with name nihms410817t31.jpg (3gd) 43
a

Representative procedure: 1g (0.25 mmol), 2.0 equiv of 2, 5.0 equiv of CsF, 5 mol % Pd(OAc)2, 10 mol % dppm, 1.0 equiv of Na2CO3 in 5 ml of 4:1 toluene/MeCN at 110 °C for 16–24 h.

b

Isolated yield.

Conclusions

In summary, we have developed a novel synthesis of phenanthridinones, which involves the palladium-catalyzed annulation of arynes by 2-halobenzamides. This method provides an efficient synthesis of substituted phenanthridinones from readily available starting materials. Our process has been shown to be tolerant of a wide variety of functional groups, which makes further elaboration possible.

Experimental Section

General

The 1H and 13C NMR spectra were recorded at 300 and 75.5 MHz or 400 and 100 MHz respectively. All melting points are uncorrected. High resolution mass spectra (HRMS) were obtained using EI at 70 eV (TOF) or using an Agilent QTOF 6540 mass spectrometer (APCI at 70 eV). All reagents were used directly as obtained commercially unless otherwise noted. All reactions were carried out in oven-dried glassware and monitored by thin layer chromatography (SiO2, hexanes or hexanes/EtOAc). THF was distilled over Na. The silylaryl triflate 2a, CsF, TBAF solution (1M in THF) and acetonitrile were purchased from Sigma-Aldrich Co. The 4,5-dimethyl-substituted silylaryl triflate 2b, the 4,5-dimethoxy-substituted silylaryl triflate 2c and the 4,5-difluoro-substituted silylaryl triflate 2d were prepared according to a previous literature procedure.18e,23

Non-commercially available compounds

Non-commercially available starting materials were prepared according to literature procedures.24

graphic file with name nihms410817f3.jpg

N-Benzyl-2-bromo-5-methylbenzamide (1m). White solid: mp 133–135 °C; 1H NMR (300 MHz, CDCl3) δ 7.41–7.21 (m, 7H), 7.04 (dd, J = 9.0, 3.0 Hz, 1H), 6.47 (s, 1H), 4.59 (d, J = 3.0 Hz, 2H), 2.28 (s, 3H); 13C NMR (300 MHz, CDCl3) δ 167.8, 137.8, 137.7, 137.4, 133.2, 132.2, 130.3, 128.8, 128.1, 127.7, 115.9, 44.2, 20.9; HRMS (EI) calcd for C15H14NOBr: 303.0259, found 303.0265.

graphic file with name nihms410817f4.jpg

N-Benzyl-2-bromo-5-(trifluoromethyl)benzamide (1r). White solid: mp 148–150 °C; 1H NMR (300 MHz, d6-DMSO) δ 9.17 (t, J = 6.0 Hz, 1H), 7.93 (d, J = 9.0 Hz, 1H), 7.80 (s, 1H), 7.74 (dd, J = 9.0, 3.0 Hz, 1H), 7.42–7.25 (m, 5H), 4.50 (d, J = 6.0 Hz, 2H); 13C NMR (300 MHz, d6-DMSO) δ 166.0, 139.9, 138.7, 134.1, 128.4, 127.4, 127.4, 127.0, 125.5, 125.4, 123.9, 121.9, 42.7; HRMS (EI) calcd for C15H11NOBrF3: 356.9976, found 356.9973.

graphic file with name nihms410817f5.jpg

N-Benzyl-2-bromo-4-nitrobenzamide (1u). White solid: mp 148–150 °C; 1H NMR (300 MHz, CDCl3) δ 8.42 (s, 1H), 8.17 (dd, J = 9.0, 3.0 Hz, 1H), 7.65 (d, J = 9.0 Hz, 1H), 7.37–7.26 (m, 5H), 6.39 (br s, 1H), 4.63 (d, J = 6.0 Hz, 2H); 13C NMR (300 MHz, CDCl3) δ 165.9, 148.7, 143.5, 137.1, 130.3, 129.1, 128.6, 128.2, 128.2, 122.7, 120.2, 44.6; HRMS (EI) calcd for C14H11N2O3Br: 333.9953, found 334.9960.

graphic file with name nihms410817f6.jpg

N,N’-Dibenzyl-2-bromo-1,4-benzenedicarboxamide (1v). White solid: mp 219–221 °C; 1H NMR (300 MHz, d6-DMSO) δ 9.28 (t, J = 6.0 Hz, 1H), 9.09 (t, J = 6.0 Hz, 1H), 8.18 (s, 1H), 7.95 (d, J = 9.0 Hz, 1H), 7.55 (d, J = 9.0 Hz, 1H), 7.41–7.25 (m, 10H), 4.49 (d, J = 6.0 Hz, 2H); 13C NMR (300 MHz, d6-DMSO) δ 168.9, 164.2, 141.4, 139.3, 139.0, 136.3, 131.4, 128.8, 128.4, 128.4, 127.3, 126.9, 126.9, 126.6, 119.0, 42.8, 42.5; HRMS (EI) calcd for C22H19N2O2Br: 422.0630, found 422.0625.

General Procedure for the Palladium-Catalyzed Synthesis of Phenanthridinones The 2-bromobenzamide (1a) (0.25 mmol), the 2-(trimethylsilyl)aryl triflate (2.0 equiv), CsF (5.0 equiv), Na2CO3 (1.0 equiv), Pd(OAc)2 (5 mol %), dppm (10 mol %), 4 ml of toluene, and 1 ml of MeCN were placed in a 4 dram vial, and the vial was sealed. The reaction mixture was stirred first at room temperature for 1 min and then heated to 110 °C for 16–24 h. The mixture was allowed to cool to room temperature, diluted with ethyl acetate, washed with brine, dried over anhydrous MgSO4, and concentrated under reduced pressure. The product was isolated by flash chromatography on silica gel using hexanes/EtOAc as the eluent.

graphic file with name nihms410817f7.jpg

5-Ethylphenanthridin-6(5H)-one (3a). White solid (41.0 mg, 73%): mp 98–99 °C (lit.25 mp 87–90 °C); 1H NMR (300 MHz, d6-acetone) δ 8.48–8.44 (m, 3H), 7.82 (td, J = 9.0, 3.0 Hz, 1H), 7.65–7.59 (m, 3H), 7.35–7.30 (m, 1H), 4.46 (q, J = 6.0 Hz, 2H), 1.35 (t, J = 6.0 Hz, 3H); 13C NMR (300 MHz, d6-acetone) δ 160.4, 137.3, 133.8, 132.6, 130.0, 128.5, 128.0, 125.9, 123.9, 122.4, 122.2, 119.3, 115.7, 37.3, 12.4; HRMS (EI) calcd for C15H13NO: 223.0997, found 223.0995. The 1H and 13C NMR spectral data are in good agreement with the literature data.26

graphic file with name nihms410817f8.jpg

5-Isopropylphenanthridin-6(5H)-one (3b). White solid (41.4 mg, 70%): mp 99–101 °C; 1H NMR (300 MHz, d6-acetone) δ 8.44 (dd, J = 9.0, 3.0 Hz, 3H), 7.84–7.76 (m, 2H), 7.64–7.54 (m, 2H), 7.32 (t, J = 9.0 Hz, 1H), 5.42 (m, 1H), 1.68 (d, J = 9.0 Hz, 6H); 13C NMR (300 MHz, d6-acetone) δ 162.5, 135.1, 133.8, 130.8, 129.6, 129.2, 128.0, 125.3, 123.5, 123.3, 121.1, 117.2, 49.1, 20.5; HRMS (EI) calcd for C16H15NO: 237.1154, found 237.1152.

graphic file with name nihms410817f9.jpg

5-Cyclohexylphenanthridin-6(5H)-one (3c). White solid (60.1 mg, 87%): mp 117–120 °C; 1H NMR (300 MHz, CDCl3) δ 8.50 (d, J = 7.8 Hz, 1H), 8.23 (dd, J = 10.0, 7.5 Hz, 2H), 7.74–7.45 (m, 4H), 7.26 (t, J = 7.2 Hz, 1H), 2.72 (m, 2H), 2.00–1.76 (m, 6H), 1.56–1.36 (m, 3H); 13C NMR (300 MHz, CDCl3) δ 162.2, 138.1, 133.7, 132.3, 129.1, 128.7, 128.0, 126.8, 123.7, 122.2, 121.5, 120.3, 115.9, 57.9, 29.3, 26.9, 25.7; HRMS (EI) calcd for C19H19NO: 277.1467, found 277.1465.

graphic file with name nihms410817f10.jpg

5-tert-Butylphenanthridin-6(5H)-one (3d). White solid (40.3 mg, 64%): mp 128–130 °C; 1H NMR (300 MHz, d6-acetone) δ 8.30–8.21 (m, 3H), 7.76–7.72 (m, 2H), 7.56 (t, J = 9.0 Hz, 1H), 7.42 (t, J = 9.0 Hz, 1H), 7.25 (td, J = 9.0, 3.0 Hz, 1H), 1.79 (s, 9H); 13C NMR (300 MHz, CDCl3) δ 165.6, 138.1, 133.9, 132.1, 129.6, 127.9, 127.7, 126.8, 123.8, 122.7, 122.2, 121.5, 120.8, 60.7, 30.7; HRMS (EI) calcd for C17H17NO: 251.1310, found 251.1311.

graphic file with name nihms410817f11.jpg

5-Allylphenanthridin-6(5H)-one (3e). White solid (38.4 mg, 65%): mp 97–98 °C (lit.27 mp 99 °C); 1H NMR (600 MHz, CDCl3) δ 8.60 (d, J = 8.0 Hz, 1H), 8.33 (dd, J = 8.3, 3.7 Hz, 2H), 7.81 (t, J = 7.6 Hz, 1H), 7.63 (t, J = 7.6 Hz, 1H), 7.54 (t, J = 7.8 Hz, 1H), 7.42 (d, J = 8.4 Hz, 1H), 7.35 (t, J = 7.6 Hz, 1H), 6.12–5.98 (m, 1H), 5.27 (d, J = 10.5 Hz, 1H), 5.20 (d, J = 17.3 Hz, 1H), 5.10 (d, J = 4.7 Hz, 2H); 13C NMR (150 MHz, CDCl3) δ 161.4, 137.3, 133.7, 132.6, 132.0, 129.5, 129.0, 128.0, 125.5, 123.3, 122.5, 121.7, 119.5, 117.0, 115.8, 45.1; HRMS (APCI) calcd for C16H14NO [M+H]+: 236.1070, found 236.1073.

graphic file with name nihms410817f12.jpg

5-Benzylphenanthridin-6(5H)-one (3g). Pale yellow solid (from 1g: 58.5 mg, 82%; from 1k: 27.4 mg, 38%): mp 126–129 °C (lit.28 mp 112–113 °C); 1H NMR (600 MHz, CDCl3) δ 8.66 (d, J = 8.7 Hz, 1H), 8.35–8.27 (m, 2H), 7.82 (t, J = 7.6 Hz, 1H), 7.65 (t, J = 7.5 Hz, 1H), 7.41 (t, J = 8.4 Hz, 1H), 7.36–7.23 (m, 7H), 5.70 (s, 2H); 13C NMR (150 MHz, CDCl3) δ 162.0, 137.3, 136.6, 133.9, 132.8, 129.6, 129.2, 128.8, 128.1, 127.2, 126.6, 125.4, 123.3, 122.6, 121.7, 119.6, 116.1, 46.5; HRMS (APCI) calcd for C20H16NO [M+H]+: 286.1226, found 286.1232. The 1H and 13C NMR spectral data are in good agreement with the literature data.29

graphic file with name nihms410817f13.jpg

5-(4-Methylbenzyl)phenanthridin-6(5H)-one (3h). White solid (57.7 mg, 77%): mp 106–108 °C; 1H NMR (300 MHz, CDCl3) δ 8.62 (d, J = 8.1 Hz, 1H), 8.27 (t, J = 6.3 Hz, 1H), 7.77 (t, J = 7.2 Hz, 1H), 7.60 (t, J = 7.2 Hz, 1H), 7.36–7.07 (m, 8H), 5.61 (s, 2H), 2.28 (s, 3H); 13C NMR (300 MHz, CDCl3) δ 162.1, 137.6, 137.0, 134.0, 133.7, 132.8, 129.7, 129.6, 129.3, 128.2, 126.7, 125.6, 123.4, 122.7, 121.9, 119.7, 116.2, 46.4, 21.3; HRMS (EI) calcd for C21H17NO: 299.1310, found 299.1307.

graphic file with name nihms410817f14.jpg

5-(4-Methoxybenzyl)phenanthridin-6(5H)-one (3i). Pale brown glassy solid (59.4 mg, 75%): mp 136–137 °C; 1H NMR (600 MHz, CDCl3) δ 8.66 (d, J = 8.0 Hz, 1H), 8.31 (t, J = 9.1 Hz, 2H), 7.81 (t, J = 8.3 Hz, 1H), 7.65 (t, J = 7.9 Hz, 1H), 7.43 (t, J = 8.4 Hz, 1H), 7.38 (d, J = 8.0 Hz, 1H), 7.29 (t, J = 8.0 Hz, 1H), 7.25 (d, J = 8.7 Hz, 2H), 6.86 (d, J = 8.7 Hz, 2H), 5.63 (s, 2H), 3.78 (s, 3H); 13C NMR (150 MHz, CDCl3) δ 161.9, 158.8, 137.4, 133.8, 132.7, 129.6, 129.2, 128.7, 128.1, 127.9, 125.5, 123.3, 122.6, 121.7, 119.5, 116.1, 114.2, 55.3, 46.0; HRMS (APCI) calcd for C21H18NO2 [M+H]+: 316.1332, found 316.1322. The 1H and 13C NMR spectral data are in good agreement with the literature data.29

graphic file with name nihms410817f15.jpg

5-(4-Nitrobenzyl)phenanthridin-6(5H)-one (3j). White solid (68.5 mg, 83%): mp 235–237 °C; 1H NMR (300 MHz, CDCl3) δ 8.60 (d, J = 9.0 Hz, 1H), 8.36 (d, J = 9.0 Hz, 2H), 8.25 (dd, J = 6.0, 3.0 Hz, 1H), 7.85 (t, J = 9.0 Hz, 1H), 7.65 (t, J = 9.0 Hz, 1H), 7.42–7.27 (m, 4H), 7.09 (d, J = 9.0 Hz, 1H), 6.99 (dd, J = 6.0, 3.0 Hz, 1H), 6.05 (s, 2H); 13C NMR (300 MHz, CDCl3) δ 166.6, 137.3, 134.4, 133.3, 132.6, 130.1, 129.4, 128.5, 128.4, 127.7, 125.9, 125.4, 123.8, 123.3, 122.1, 119.9, 115.7, 45.1; HRMS (EI) calcd for C20H14N2O3: 330.1004, found 330.1011.

graphic file with name nihms410817f16.jpg

5-Benzyl-9-methylphenanthridin-6(5H)-one (3l). White solid (62.6 mg, 84%): mp 173–175 °C; 1H NMR (300 MHz, d6-acetone) δ 8.47 (d, J = 6.0 Hz, 1H), 8.42 (d, J = 6.0 Hz, 1H), 8.35 (s, 1H), 7.51 (d, J = 9.0 Hz, 1H), 7.43 (dd, J = 6.0, 3.0 Hz, 2H), 7.31–7.23 (m, 6H), 5.70 (s, 2H), 2.59 (s, 3H); 13C NMR (300 MHz, CDCl3) δ 162.1, 143.4, 137.7, 136.9, 134.0, 129.7, 129.6, 129.4, 129.0, 127.3, 126.7, 123.4, 122.6, 121.9, 119.7, 116.2, 46.6, 22.4; HRMS (EI) calcd for C21H17NO: 299.1310, found 299.1304.

graphic file with name nihms410817f17.jpg

5-Benzyl-8-methylphenanthridin-6(5H)-one (3m). White solid (59.0 mg, 79%): mp 173–175 °C; 1H NMR (300 MHz, CDCl3) δ 8.43 (s, 1H), 8.25 (d, J = 7.8 Hz, 1H), 8.19 (d, J = 8.4 Hz, 1H), 7.61 (dd, J = 8.1, 1.8 Hz, 1H), 7.38–7.21 (m, 8H), 5.67 (s, 2H), 2.54 (s, 3H); 13C NMR (300 MHz, CDCl3) δ 162.2, 138.4, 137.2, 136.9, 134.2, 131.6, 129.2, 129.1, 129.0, 127.3, 126.7, 125.5, 123.2, 122.7, 121.9, 119.8, 116.1, 46.6, 21.6; HRMS (EI) calcd for C21H17NO: 299.1310, found 299.1306.

graphic file with name nihms410817f18.jpg

5-Benzyl-10-methylphenanthridin-6(5H)-one (3n). White solid (55.1 mg, 74%): mp 122–123 °C; 1H NMR (300 MHz, CDCl3) δ 8.62 (d, J = 9.0 Hz, 1H), 8.46 (d, J = 6.0 Hz, 1H), 7.65 (d, J = 9.0 Hz, 1H), 7.52 (t, J = 9.0 Hz, 1H), 7.38–7.23 (m, 8H), 5.67 (s, 2H), 2.97 (s, 3H); 13C NMR (300 MHz, CDCl3) δ 162.4, 137.7, 137.4, 136.8, 134.7, 133.5, 129.0, 128.8, 128.1, 127.8, 127.5, 127.3, 126.7, 121.9, 121.3, 116.0, 47.0, 26.3; HRMS (EI) calcd for C21H17NO: 299.1310, found 299.1303.

graphic file with name nihms410817f19.jpg

5-Benzyl-8-methoxyphenanthridin-6(5H)-one (3o). White solid (58.3 mg, 74%): mp 133–135 °C; 1H NMR (300 MHz, d6-acetone) δ 8.42 (d, J = 9.0 Hz, 1H), 8.36 (d, J = 6.0 Hz, 1H), 7.96 (d, J = 3.0 Hz, 1H), 7.46–7.24 (m, 9H), 5.71 (s, 2H), 3.98 (s, 3H); 13C NMR (300 MHz, d6- acetone) δ 162.3, 161.2, 138.8, 137.8, 130.1, 129.9, 128.7, 128.4, 128.3, 128.0, 125.5, 124.3, 123.9, 123.3, 120.8, 117.4, 110.9, 56.5, 47.1; HRMS (EI) calcd for C21H17NO2: 315.1259, found 315.1259.

graphic file with name nihms410817f20.jpg

5-Benzyl-8,9-dimethoxyphenanthridin-6(5H)-one (3p). White solid (60.2 mg, 70%): mp 210–212 °C; 1H NMR (300 MHz, CDCl3) δ 8.13 (d, J = 7.8 Hz, 1H), 7.98 (s, 1H), 7.59 (s, 1H), 7.38–7.21 (m, 8H), 5.65 (s, 2H), 4.09 (s, 3H), 4.04 (s, 3H); 13C NMR (300 MHz, CDCl3) δ 161.5, 153.6, 150.0, 137.0, 137.0, 128.9, 128.8, 128.8, 127.3, 126.7, 122.8, 122.5, 119.5, 119.5, 116.2, 109.4, 102.7, 56.4, 56.3, 46.6; HRMS (EI) calcd for C22H19NO3: 345.1365, found 345.1370.

graphic file with name nihms410817f21.jpg

5-Benzyl-8-chlorophenanthridin-6(5H)-one (3q). White solid (53.5 mg, 67%): mp 155–157 °C; 1H NMR (300 MHz, CDCl3) δ 8.59 (d, J = 2.1 Hz, 1H), 8.23 (d, J = 9.0 Hz, 1H), 8.22 (d, J = 8.1 Hz, 1H), 7.73 (dd, J = 8.1, 2.4 Hz, 1H), 7.41 (m, 1H), 7.32–7.24 (m, 7H), 5.65 (s, 2H); 13C NMR (300 MHz, CDCl3) δ 161.1, 137.4, 136.5, 134.5, 133.2, 132.5, 130.1, 129.1, 128.9, 127.5, 126.9, 126.7, 123.7, 123.5, 123.0, 119.0, 116.4, 46.8; HRMS (EI) calcd for C20H14NOCl: 319.0764, found 319.0756.

graphic file with name nihms410817f22.jpg

5-Benzyl-8-(trifluoromethyl)phenanthridin-6(5H)-one (3r). White solid (45.7 mg, 52%): mp 186–188 °C; 1H NMR (300 MHz, CDCl3) δ 8.92 (s, 1H), 8.41 (d, J = 8.4 Hz, 1H), 8.30 (dd, J = 8.1, 1.5 Hz, 1H), 7.99 (dd, J = 8.7, 1.8 Hz, 1H), 7.47 (m, 1H), 7.36–7.24 (m, 7H), 5.67 (m, 2H); 13C NMR (300 MHz, CDCl3) δ 161.3, 138.1, 136.3, 131.1, 129.1, 129.0, 129.0, 127.6, 127.1, 127.0, 126.7, 125.7, 124.1, 123.2, 122.9, 118.6, 116.5, 46.9; HRMS (EI) calcd for C21H14NOF3: 353.1027, found 353.1035.

graphic file with name nihms410817f23.jpg

5-Benzyl-8-fluorophenanthridin-6(5H)-one (3s). Pale solid (49.3 mg, 65%): mp 164–166 °C; 1H NMR (600 MHz, CDCl3) δ 8.33–8.29 (m, 2H), 8.24 (d, J = 7.9 Hz, 1H), 7.54 (td, J = 8.4, 2.9 Hz, 1H), 7.43 (t, J = 8.4 Hz, 1H), 7.38–7.24 (m, 7H), 5.68 (s, 2H); 13C NMR (150 MHz, CDCl3) δ 162.0, 137.3, 136.6, 133.9, 132.8, 129.6, 129.2, 128.8, 128.1, 127.2, 126.6, 125.4, 123.3, 122.6, 121.7, 119.6, 116.1, 46.5 (extra peaks due to C-F coupling); 19F NMR (600 MHz, CDCl3) δ -112.0; HRMS (APCI) calcd for C20H15FNO [M+H]+: 304.1132, found 304.1136.

graphic file with name nihms410817f24.jpg

5-Benzyl-9-fluorophenanthridin-6(5H)-one (3t). Pale white solid (60.1 mg, 79%): mp 155–158 °C (lit.28 mp 157–158 °C); 1H NMR (600 MHz, CDCl3) δ 8.67 (dd, J = 8.9, 5.9 Hz, 1H), 8.19 (d, J = 7.3 Hz, 1H), 7.94 (dd, J = 10.3, 2.4 Hz, 1H), 7.46 (t, J = 8.5 Hz, 1H), 7.37–7.25 (m, 8H), 5.68 (s, 2H); 13C NMR (150 MHz, CDCl3) δ 166.7, 165.0, 161.3, 137.8, 136.5, 136.5, 136.4, 132.5, 132.4, 130.3, 129.6, 128.9, 127.3, 126.5, 123.6, 122.7, 122.0, 122.0, 118.8, 118.8, 116.4, 116.3, 116.2, 115.4, 107.8, 107.6, 46.5 (extra peaks due to C-F coupling); 19F NMR (600 MHz, CDCl3) δ-105.4; HRMS (APCI) calcd for C20H15FNO [M+H]+: 304.1132, found 304.1136. The 1H and 13C NMR spectral data are in good agreement with the literature data.28

graphic file with name nihms410817f25.jpg

5-Benzyl-9-nitrophenanthridin-6(5H)-one (3u). Yellow solid (58.0 mg, 70%): decomposes above 300 °C; 1H NMR (300 MHz, CDCl3) δ 9.18 (d, J = 2.1 Hz, 1H), 8.80 (d, J = 8.7 Hz, 1H), 8.41–8.36 (m, 2H), 7.56–7.50 (m, 2H), 7.40–7.27 (m, 6H), 5.69 (s, 2H); 13C NMR (300 MHz, CDCl3) δ 160.4, 147.2, 139.1, 138.4, 136.8, 132.3, 129.0, 127.5, 127.0, 126.9, 125.8, 125.5, 125.1, 124.2, 123.7, 118.0, 116.9, 46.2; HRMS (EI) calcd for C20H14N2O3: 330.1004, found 330.1001.

graphic file with name nihms410817f26.jpg

5-Benzyl-9-[(benzylamino)carbonyl]phenanthridin-6(5H)-one (3v). White solid (57.9 mg, 55%): mp 197–200 °C; 1H NMR (300 MHz, CDCl3) δ 8.80 (s, 1H), 8.58 (d, J = 8.1 Hz, 1H), 8.30 (d, J = 7.8 Hz, 1H), 7.85 (dd, J = 8.4, 1.5 Hz, 1H), 7.33–7.22 (m, 13H), 6.88 (s, 1H), 5.61 (s, 2H), 4.72 (d, J = 5.7 Hz, 2H); 13C NMR (300 MHz, CDCl3) δ 166.8, 161.4, 138.1, 138.0, 136.4, 134.3, 130.3, 129.8, 129.0, 129.0, 128.2, 127.9, 127.4, 126.6, 125.3, 123.8, 123.0, 121.9, 119.2, 116.2, 46.7, 44.6; HRMS (EI) calcd for C28H22N2O2: 418.1681, found 418.1689.

graphic file with name nihms410817f27.jpg

6-Benzylbenzo-1,6-naphthyridin-5-one (3w). White solid (25.7 mg, 36%): mp 129–131 °C; 1H NMR (300 MHz, CDCl3) δ 9.04 (dd, J = 6.0, 3.0 Hz, 1H), 8.90 (d, J = 9.0 Hz, 1H), 8.83 (dd, J = 9.0, 3.0 Hz, 1H), 7.57–7.47 (m, 2H), 7.37–7.24 (m, 7H), 5.66 (s, 2H); 13C NMR (300 MHz, CDCl3) δ 162.1, 154.2, 138.8, 137.2, 136.4, 131.5, 129.1, 127.6, 126.7, 125.5, 123.3, 123.2, 121.1, 115.7, 46.7; HRMS (EI) calcd for C19H14N2O: 286.1106, found 286.1098.

graphic file with name nihms410817f28.jpg

5-Benzyl-2,3-dimethylphenanthridin-6(5H)-one (3gb). White solid (39.0 mg, 50%): mp 155–157 °C; 1H NMR (300 MHz, CDCl3) δ 8.64–8.58 (m, 1H), 8.32–8.25 (m, 1H), 8.01 (s, 1H), 7.78–7.73 (m, 1H), 7.65–7.54 (m, 1H), 7.32–7.25 (m, 3H), 7.09 (s, 1H), 6.87 (d, J = 12.0 Hz, 2H), 5.64 (s, 2H), 3.90 (s, 3H), 3.88 (s, 3H); 13C NMR (300 MHz, CDCl3) δ 162.1, 138.9, 137.1, 132.9, 132.7, 129.8, 129.4, 129.0, 129.0, 128.2, 127.3, 126.7, 123.5, 121.9, 116.2, 46.6, 20.7, 19.6; HRMS (EI) calcd for C22H19NO: 313.1467, found 313.1470.

graphic file with name nihms410817f29.jpg

5-Benzyl-2,3-dimethoxyphenanthridin-6(5H)-one (3gc). White solid (39.6 mg, 46%): mp 153–155 °C; 1H NMR (300 MHz, CDCl3) δ 8.61 (dd, J = 8.1, 1.5 Hz, 1H), 8.14 (d, J = 8.1, 1H), 7.76 (td, J = 8.1, 1.5 Hz, 1H), 7.64 (s, 1H), 7.56 (t, J = 8.1 Hz, 1H), 7.30–7.23 (m, 5H), 6.79 (s, 1H), 5.66 (s, 2H), 3.99 (s, 3H), 3.75 (s, 3H); 13C NMR (300 MHz, CDCl3) δ 162.2, 150.8, 145.3, 137.1, 134.0, 132.8, 132.4, 129.5, 129.1, 127.5, 127.2, 126.8, 124.7, 121.3, 112.4, 105.4, 100.1, 56.5, 56.1, 47.1; HRMS (EI) calcd for C22H19NO3: 345.1365, found 345.1370.

graphic file with name nihms410817f30.jpg

5-Benzyl-2,3-difluorophenanthridin-6(5H)-one (3gd). White solid (34.7 mg, 43%): mp 187–189 °C; 1H NMR (300 MHz, CDCl3) δ 8.61 (d, J = 9.0 Hz, 1H), 8.05 (m, 1H), 7.82 (t, J = 9.0 Hz, 1H), 7.65 (d, J = 9.0 Hz, 1H), 7.35–7.08 (m, 7H), 5.60 (s, 2H); 13C NMR (300 MHz, CDCl3) δ 161.9, 152.7, 148.1, 136.8, 135.9, 133.3, 129.6, 129.2, 129.0, 128.7, 128.3, 127.8, 127.4, 126.7, 116.3, 111.8, 105.6, 47.2; HRMS (EI) calcd for C20H13NOF2: 321.0965, found 321.0973.

Supplementary Material

1_si_001

Acknowledgment

We thank the National Institutes of Health Kansas University Center of Excellence for Chemical Methodologies and Library Development (P50 GM069663), and the National Science Foundation for support of this research. Thanks are also extended to previous group member Dr. Zhijian Liu for many valuable suggestions.

Footnotes

Supporting Information

1H and 13C NMR data for compounds. This material is available free of charge via the Internet at http://pubs.acs.org/.

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