Abstract
X-ray fiber diffraction studies of duplexes formed by 2-substituted poly(A) and poly(U) provide evidence for the existence of a double helical structure of poly(A)·poly(U) held together by Hoogsteen-type base pairing with parallel chain polarity.
Keywords: x-ray diffraction, nucleic acid, alternative complementarity, molecular evolution, gene processing
Full text
PDF




Images in this article
Selected References
These references are in PubMed. This may not be the complete list of references from this article.
- Altona C., Sundaralingam M. Conformational analysis of the sugar ring in nucleosides and nucleotides. A new description using the concept of pseudorotation. J Am Chem Soc. 1972 Nov 15;94(23):8205–8212. doi: 10.1021/ja00778a043. [DOI] [PubMed] [Google Scholar]
- Arnott S., Bond P. J. Structures for Poly(U)-poly(A)-poly(U)triple stranded polynucleotides. Nat New Biol. 1973 Jul 25;244(134):99–101. doi: 10.1038/newbio244099a0. [DOI] [PubMed] [Google Scholar]
- Arnott S., Hukins D. W. Conservation of conformation in mono and poly-nucleotides. Nature. 1969 Nov 29;224(5222):886–888. doi: 10.1038/224886a0. [DOI] [PubMed] [Google Scholar]
- Arnott S., Hukins D. W., Dover S. D., Fuller W., Hodgson A. R. Structures of synthetic polynucleotides in the A-RNA and A'-RNA conformations: x-ray diffraction analyses of the molecular conformations of polyadenylic acid--polyuridylic acid and polyinosinic acid--polycytidylic acid. J Mol Biol. 1973 Dec 5;81(2):107–122. doi: 10.1016/0022-2836(73)90183-6. [DOI] [PubMed] [Google Scholar]
- Arnott S., Hukins D. W. Refinement of the structure of B-DNA and implications for the analysis of x-ray diffraction data from fibers of biopolymers. J Mol Biol. 1973 Dec 5;81(2):93–105. doi: 10.1016/0022-2836(73)90182-4. [DOI] [PubMed] [Google Scholar]
- Arnott S. The geometry of nucleic acids. Prog Biophys Mol Biol. 1970;21:265–319. doi: 10.1016/0079-6107(70)90027-1. [DOI] [PubMed] [Google Scholar]
- FULLER W., WILKINS M. H., WILSON H. R., HAMILTON L. D. THE MOLECULAR CONFIGURATION OF DEOXYRIBONUCLEIC ACID. IV. X-RAY DIFFRACTION STUDY OF THE A FORM. J Mol Biol. 1965 May;12:60–76. doi: 10.1016/s0022-2836(65)80282-0. [DOI] [PubMed] [Google Scholar]
- Fukui T., Ikehara M. Polynucleotides XLVII. Synthesis and properties of poly(2-methylthio- and 2-ethylthioadenylic acid). Formation of non-Watson-Crick type complexes. Biochim Biophys Acta. 1979 May 24;562(3):527–533. doi: 10.1016/0005-2787(79)90115-1. [DOI] [PubMed] [Google Scholar]
- Fuller W., Hutchinson F., Spencer M., Wilkins M. H. Molecular and crystal structures of double-helical RNA. I. An x-ray diffraction study of fragmented yeast RNA and a preliminary double-helical RNA model. J Mol Biol. 1967 Aug 14;27(3):507–524. doi: 10.1016/0022-2836(67)90055-1. [DOI] [PubMed] [Google Scholar]
- Ikehara M., Hattori M., Fukui T. Synthesis and properties of poly(2-methyladenylic acid). Formation of a poly(A)-poly(U) complex with Hoogsteen-type hydrogen binding. Eur J Biochem. 1972 Dec 4;31(2):329–334. doi: 10.1111/j.1432-1033.1972.tb02537.x. [DOI] [PubMed] [Google Scholar]
- Ishikawa F., Frazier J., Howard F. B., Miles H. T. Polyadenylate polyuridylate helices with non-Watson-Crick hydrogen bonding. J Mol Biol. 1972 Oct 14;70(3):475–490. doi: 10.1016/0022-2836(72)90554-2. [DOI] [PubMed] [Google Scholar]
- Jack A., Ladner J. E., Klug A. Crystallographic refinement of yeast phenylalanine transfer RNA at 2-5A resolution. J Mol Biol. 1976 Dec 25;108(4):619–649. doi: 10.1016/s0022-2836(76)80109-x. [DOI] [PubMed] [Google Scholar]
- Katz L., Tomita K., Rich A. The crystal structure of the intermolecular complex 9-ethyladenine: 1-methyl-5-bromouracil. Acta Crystallogr. 1966 Nov 10;21(5):754–764. doi: 10.1107/s0365110x66003815. [DOI] [PubMed] [Google Scholar]
- LANGRIDGE R., RICH A. Molecular structure of helical polycytidylic acid. Nature. 1963 May 25;198:725–728. doi: 10.1038/198725a0. [DOI] [PubMed] [Google Scholar]
- Mazumdar S. K., Saenger W. Molecular structure of poly-2-thiouridylic acid, a double helix with non-equivalent polynucleotide chains. J Mol Biol. 1974 May 15;85(2):213–219. doi: 10.1016/0022-2836(74)90361-1. [DOI] [PubMed] [Google Scholar]
- Quigley G. J., Rich A. Structural domains of transfer RNA molecules. Science. 1976 Nov 19;194(4267):796–806. doi: 10.1126/science.790568. [DOI] [PubMed] [Google Scholar]
- RICH A., DAVIES D. R., CRICK F. H., WATSON J. D. The molecular structure of polyadenylic acid. J Mol Biol. 1961 Feb;3:71–86. doi: 10.1016/s0022-2836(61)80009-0. [DOI] [PubMed] [Google Scholar]
- Sakore T. D., Tavale S. S., Sobell H. M. Base-pairing configurations between purines and pyrimidines in the solid state. I. Crystal and molecular structure of a 1:2 purine-pyrimidine hydrogen-bonded complex: 9-ethyladenine-1-methyl-5-iodouracil. J Mol Biol. 1969 Aug 14;43(3):361–374. doi: 10.1016/0022-2836(69)90346-5. [DOI] [PubMed] [Google Scholar]
- Seeman N. C., Rosenberg J. M., Suddath F. L., Kim J. J., Rich A. RNA double-helical fragments at atomic resolution. I. The crystal and molecular structure of sodium adenylyl-3',5'-uridine hexahydrate. J Mol Biol. 1976 Jun 14;104(1):109–144. doi: 10.1016/0022-2836(76)90005-x. [DOI] [PubMed] [Google Scholar]
- WATSON J. D., CRICK F. H. Molecular structure of nucleic acids; a structure for deoxyribose nucleic acid. Nature. 1953 Apr 25;171(4356):737–738. doi: 10.1038/171737a0. [DOI] [PubMed] [Google Scholar]
- Zimmerman S. B. Letter to the editor: The polyuridylic acid complex with polyamines: an x-ray fiber diffraction observation. J Mol Biol. 1976 Mar 15;101(4):563–565. doi: 10.1016/0022-2836(76)90245-x. [DOI] [PubMed] [Google Scholar]

