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Acta Crystallographica Section E: Structure Reports Online logoLink to Acta Crystallographica Section E: Structure Reports Online
. 2012 Oct 27;68(Pt 11):m1407. doi: 10.1107/S160053681204367X

Dibromido(2,9-dimethyl-1,10-phenanthroline-κ2 N,N′)cobalt(II) acetonitrile monosolvate

Sadif A Shirvan a,*, Manouchehr Aghajeri a, Sara Haydari Dezfuli a, Fereydoon Khazali a, Ali Borsalani b
PMCID: PMC3515147  PMID: 23284374

Abstract

In the title compound, [CoBr2(C14H12N2)]·CH3CN, the CoII atom is four-coordinated in a distorted tetra­hedral geometry by two N atoms from a chelating 2,9-dimethyl-1,10-phenanthroline ligand and two terminal Br atoms. In the crystal, π–π contacts between the pyridine and benzene rings [centroid–centroid distances = 3.828 (5), 3.782 (5), 3.880 (5) and 3.646 (5) Å] stabilize the structure.

Related literature  

For related structures, see: Akbarzadeh Torbati et al. (2010); Alizadeh et al. (2009); Ding et al. (2006); Fanizzi et al. (1991); Lemoine et al. (2003); Robinson & Sinn (1975).graphic file with name e-68-m1407-scheme1.jpg

Experimental  

Crystal data  

  • [CoBr2(C14H12N2)]·C2H3N

  • M r = 468.04

  • Monoclinic, Inline graphic

  • a = 7.6380 (5) Å

  • b = 12.7943 (6) Å

  • c = 17.9545 (11) Å

  • β = 101.128 (5)°

  • V = 1721.58 (18) Å3

  • Z = 4

  • Mo Kα radiation

  • μ = 5.64 mm−1

  • T = 120 K

  • 0.35 × 0.20 × 0.15 mm

Data collection  

  • Bruker APEXII CCD diffractometer

  • Absorption correction: multi-scan (SADABS; Bruker, 2001) T min = 0.259, T max = 0.459

  • 8417 measured reflections

  • 3366 independent reflections

  • 2345 reflections with I > 2σ(I)

  • R int = 0.101

Refinement  

  • R[F 2 > 2σ(F 2)] = 0.075

  • wR(F 2) = 0.194

  • S = 1.02

  • 3366 reflections

  • 200 parameters

  • H-atom parameters constrained

  • Δρmax = 1.11 e Å−3

  • Δρmin = −1.03 e Å−3

Data collection: APEX2 (Bruker, 2007); cell refinement: SAINT (Bruker, 2007); data reduction: SAINT; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008); molecular graphics: ORTEP-3 (Farrugia, 1997) and Mercury (Macrae et al., 2006); software used to prepare material for publication: SHELXTL (Sheldrick, 2008).

Supplementary Material

Crystal structure: contains datablock(s) I, global. DOI: 10.1107/S160053681204367X/hy2596sup1.cif

e-68-m1407-sup1.cif (19KB, cif)

Structure factors: contains datablock(s) I. DOI: 10.1107/S160053681204367X/hy2596Isup2.hkl

e-68-m1407-Isup2.hkl (165.1KB, hkl)

Additional supplementary materials: crystallographic information; 3D view; checkCIF report

Table 1. Selected bond lengths (Å).

Co1—N1 2.051 (8)
Co1—N2 2.036 (8)
Co1—Br1 2.3592 (14)
Co1—Br2 2.3682 (14)

Acknowledgments

We are grateful to the Omidieh Branch, Islamic Azad University, for financial support.

supplementary crystallographic information

Comment

2,9-Dimethyl-1,10-phenanthroline (dmphen) is a good bidentate ligand, and numerous complexes with dmphen have been prepared, such as that of mercury (Alizadeh et al., 2009), copper (Lemoine et al., 2003), nickel (Ding et al., 2006), gold (Robinson & Sinn, 1975), platinum (Fanizzi et al., 1991) and cobalt (Akbarzadeh Torbati et al., 2010). Here, we report the synthesis and structure of the title compound.

In the title compound (Fig. 1), the CoII atom is four-coordinated in a distorted tetrahedral geometry by two N atoms from a chelating dmphen ligand and two terminal Br atoms. The Co—Br and Co—N bond lengths (Table 1) and angles are normal. In the crystal, π–π contacts between the pyridine and benzene rings (Fig. 2), Cg3···Cg3i, Cg3···Cg4i, Cg3···Cg4ii and Cg4···Cg4ii [symmetry codes: (i) -x, 1-y, 1-z; (ii) 1-x, 1-y, 1-z, Cg3 and Cg4 are the centroids of the N2, C8–C11, C13 ring and C5–C8, C13, C14 ring, respectively], with centroid–centroid distances of 3.828 (5), 3.782 (5), 3.880 (5) and 3.646 (5) Å, stabilize the structure.

Experimental

For the preparation of the title compound, a solution of 2,9-dimethyl-1,10-phenanthroline (0.28 g, 1.33 mmol) in methanol (20 ml) was added to a solution of CoBr2 (0.29 g, 1.33 mmol) in acetonitrile (15 ml) and the resulting blue solution was stirred for 15 min at 313 K. This solution was left to evaporate slowly at room temperature. After one week, blue block crystals of the title compound were isolated (yield: 0.46 g, 73.9%).

Refinement

All H atoms were positioned geometrically and refined as riding atoms, with C—H = 0.93 (aromatic) and 0.96 (CH3) Å and with Uiso(H) = 1.2(1.5 for methyl)Ueq(C). The highest residual electron density was found 0.92 Å from Br2 the deepest hole 1.02 Å from Br1.

Figures

Fig. 1.

Fig. 1.

The molecular structure of the title compound. Displacement ellipsoids are drawn at the 50% probability level.

Fig. 2.

Fig. 2.

Crystal packing diagram for the title compound.

Crystal data

[CoBr2(C14H12N2)]·C2H3N F(000) = 916
Mr = 468.04 Dx = 1.806 Mg m3
Monoclinic, P21/n Mo Kα radiation, λ = 0.71073 Å
Hall symbol: -P 2yn Cell parameters from 8417 reflections
a = 7.6380 (5) Å θ = 2.0–26.0°
b = 12.7943 (6) Å µ = 5.64 mm1
c = 17.9545 (11) Å T = 120 K
β = 101.128 (5)° Block, blue
V = 1721.58 (18) Å3 0.35 × 0.20 × 0.15 mm
Z = 4

Data collection

Bruker APEXII CCD diffractometer 3366 independent reflections
Radiation source: fine-focus sealed tube 2345 reflections with I > 2σ(I)
Graphite monochromator Rint = 0.101
φ and ω scans θmax = 26.0°, θmin = 2.0°
Absorption correction: multi-scan (SADABS; Bruker, 2001) h = −9→9
Tmin = 0.259, Tmax = 0.459 k = −15→13
8417 measured reflections l = −22→20

Refinement

Refinement on F2 Primary atom site location: structure-invariant direct methods
Least-squares matrix: full Secondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.075 Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.194 H-atom parameters constrained
S = 1.02 w = 1/[σ2(Fo2) + (0.1187P)2] where P = (Fo2 + 2Fc2)/3
3366 reflections (Δ/σ)max = 0.003
200 parameters Δρmax = 1.11 e Å3
0 restraints Δρmin = −1.03 e Å3

Special details

Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.

Fractional atomic coordinates and isotropic or equivalent isotropic displacement parameters (Å2)

x y z Uiso*/Ueq
Co1 0.15502 (14) 0.35537 (10) 0.33642 (7) 0.0162 (3)
Br1 0.31107 (12) 0.37421 (8) 0.23591 (6) 0.0249 (3)
Br2 −0.12001 (11) 0.26909 (8) 0.29292 (6) 0.0233 (3)
C1 0.3312 (15) 0.1227 (8) 0.3918 (6) 0.032 (2)
H1A 0.3906 0.1476 0.3528 0.038*
H1B 0.2067 0.1129 0.3711 0.038*
H1C 0.3828 0.0574 0.4112 0.038*
C2 0.3520 (11) 0.2011 (8) 0.4548 (5) 0.020 (2)
C3 0.4380 (12) 0.1773 (8) 0.5287 (6) 0.024 (2)
H3 0.4825 0.1103 0.5397 0.029*
C4 0.4587 (10) 0.2517 (8) 0.5861 (5) 0.022 (2)
H4 0.5151 0.2350 0.6353 0.026*
C5 0.3920 (10) 0.3531 (8) 0.5678 (5) 0.0176 (19)
C6 0.4112 (11) 0.4362 (8) 0.6219 (6) 0.022 (2)
H6 0.4712 0.4237 0.6712 0.026*
C7 0.3452 (11) 0.5316 (8) 0.6035 (5) 0.022 (2)
H7 0.3570 0.5835 0.6404 0.026*
C8 0.2557 (10) 0.5549 (7) 0.5268 (5) 0.0178 (19)
C9 0.1829 (12) 0.6513 (8) 0.5024 (7) 0.026 (2)
H9 0.1894 0.7065 0.5365 0.031*
C10 0.1008 (12) 0.6654 (8) 0.4275 (7) 0.028 (2)
H10 0.0564 0.7308 0.4107 0.033*
C11 0.0845 (10) 0.5820 (7) 0.3772 (5) 0.0166 (18)
C12 −0.0028 (13) 0.5960 (8) 0.2951 (6) 0.027 (2)
H12A −0.1007 0.5481 0.2824 0.033*
H12B 0.0828 0.5825 0.2635 0.033*
H12C −0.0460 0.6664 0.2870 0.033*
C13 0.2355 (10) 0.4741 (7) 0.4725 (5) 0.0165 (19)
C14 0.3071 (10) 0.3727 (7) 0.4935 (6) 0.0182 (19)
C15 0.1720 (12) 0.9623 (8) 0.5702 (6) 0.027 (2)
C16 0.1350 (16) 1.0197 (10) 0.6364 (7) 0.039 (3)
H16A 0.2341 1.0645 0.6560 0.059*
H16B 0.1176 0.9710 0.6750 0.059*
H16C 0.0293 1.0612 0.6216 0.059*
N1 0.2885 (9) 0.2967 (6) 0.4379 (4) 0.0182 (16)
N2 0.1506 (8) 0.4887 (6) 0.3979 (4) 0.0138 (15)
N3 0.2013 (13) 0.9203 (8) 0.5206 (7) 0.043 (3)

Atomic displacement parameters (Å2)

U11 U22 U33 U12 U13 U23
Co1 0.0134 (5) 0.0219 (7) 0.0121 (6) −0.0001 (5) −0.0010 (4) −0.0009 (5)
Br1 0.0201 (4) 0.0384 (6) 0.0167 (5) −0.0082 (4) 0.0050 (4) −0.0041 (4)
Br2 0.0160 (4) 0.0306 (6) 0.0222 (5) −0.0061 (4) 0.0014 (3) −0.0057 (4)
C1 0.042 (6) 0.025 (6) 0.027 (6) 0.011 (5) 0.005 (5) 0.000 (5)
C2 0.016 (4) 0.028 (5) 0.017 (5) 0.007 (4) 0.002 (3) 0.002 (4)
C3 0.022 (4) 0.018 (5) 0.032 (6) 0.005 (4) 0.008 (4) 0.006 (4)
C4 0.011 (4) 0.041 (6) 0.011 (5) 0.006 (4) −0.004 (3) 0.008 (4)
C5 0.006 (3) 0.032 (5) 0.015 (5) −0.001 (3) 0.003 (3) 0.000 (4)
C6 0.013 (4) 0.037 (6) 0.015 (5) −0.007 (4) 0.004 (3) −0.002 (4)
C7 0.019 (4) 0.033 (6) 0.012 (5) −0.005 (4) 0.002 (4) −0.002 (4)
C8 0.011 (4) 0.026 (5) 0.015 (5) −0.006 (3) −0.001 (3) −0.006 (4)
C9 0.016 (4) 0.022 (5) 0.041 (7) −0.002 (4) 0.013 (4) 0.000 (5)
C10 0.018 (4) 0.027 (6) 0.040 (7) 0.003 (4) 0.010 (4) 0.003 (5)
C11 0.009 (4) 0.023 (5) 0.019 (5) 0.000 (3) 0.007 (3) 0.002 (4)
C12 0.025 (5) 0.024 (5) 0.034 (6) 0.000 (4) 0.006 (4) 0.008 (5)
C13 0.007 (4) 0.027 (5) 0.015 (5) −0.005 (3) 0.003 (3) 0.002 (4)
C14 0.008 (4) 0.024 (5) 0.023 (5) −0.004 (3) 0.002 (3) −0.005 (4)
C15 0.023 (4) 0.030 (6) 0.027 (6) 0.005 (4) 0.002 (4) 0.005 (5)
C16 0.045 (6) 0.041 (7) 0.026 (6) −0.007 (5) −0.005 (5) −0.003 (5)
N1 0.008 (3) 0.027 (4) 0.020 (4) 0.007 (3) 0.004 (3) −0.001 (3)
N2 0.006 (3) 0.025 (4) 0.009 (4) −0.003 (3) −0.003 (3) −0.001 (3)
N3 0.043 (5) 0.042 (6) 0.050 (7) 0.019 (5) 0.018 (5) 0.001 (5)

Geometric parameters (Å, º)

Co1—N1 2.051 (8) C8—C9 1.390 (14)
Co1—N2 2.036 (8) C8—C13 1.409 (13)
Co1—Br1 2.3592 (14) C9—C10 1.382 (16)
Co1—Br2 2.3682 (14) C9—H9 0.9300
C1—C2 1.497 (14) C10—C11 1.387 (14)
C1—H1A 0.9600 C10—H10 0.9300
C1—H1B 0.9600 C11—N2 1.321 (12)
C1—H1C 0.9600 C11—C12 1.507 (14)
C2—N1 1.329 (12) C12—H12A 0.9600
C2—C3 1.395 (14) C12—H12B 0.9600
C3—C4 1.389 (14) C12—H12C 0.9600
C3—H3 0.9300 C13—N2 1.383 (11)
C4—C5 1.409 (14) C13—C14 1.429 (13)
C4—H4 0.9300 C14—N1 1.382 (12)
C5—C14 1.389 (13) C15—N3 1.099 (15)
C5—C6 1.428 (14) C15—C16 1.471 (16)
C6—C7 1.337 (14) C16—H16A 0.9600
C6—H6 0.9300 C16—H16B 0.9600
C7—C8 1.444 (13) C16—H16C 0.9600
C7—H7 0.9300
N2—Co1—N1 83.3 (3) C10—C9—H9 119.9
N2—Co1—Br1 113.1 (2) C8—C9—H9 119.9
N1—Co1—Br1 118.62 (19) C9—C10—C11 119.9 (9)
N2—Co1—Br2 117.58 (18) C9—C10—H10 120.0
N1—Co1—Br2 112.3 (2) C11—C10—H10 120.0
Br1—Co1—Br2 110.02 (6) N2—C11—C10 122.1 (9)
C2—C1—H1A 109.5 N2—C11—C12 117.1 (8)
C2—C1—H1B 109.5 C10—C11—C12 120.8 (9)
H1A—C1—H1B 109.5 C11—C12—H12A 109.5
C2—C1—H1C 109.5 C11—C12—H12B 109.5
H1A—C1—H1C 109.5 H12A—C12—H12B 109.5
H1B—C1—H1C 109.5 C11—C12—H12C 109.5
N1—C2—C3 120.1 (9) H12A—C12—H12C 109.5
N1—C2—C1 117.5 (8) H12B—C12—H12C 109.5
C3—C2—C1 122.3 (9) N2—C13—C8 122.6 (8)
C4—C3—C2 121.4 (9) N2—C13—C14 117.6 (8)
C4—C3—H3 119.3 C8—C13—C14 119.8 (8)
C2—C3—H3 119.3 N1—C14—C5 122.0 (8)
C3—C4—C5 118.2 (9) N1—C14—C13 117.8 (8)
C3—C4—H4 120.9 C5—C14—C13 120.1 (8)
C5—C4—H4 120.9 N3—C15—C16 179.1 (13)
C14—C5—C4 118.1 (9) C15—C16—H16A 109.5
C14—C5—C6 119.0 (9) C15—C16—H16B 109.5
C4—C5—C6 122.9 (9) H16A—C16—H16B 109.5
C7—C6—C5 121.9 (9) C15—C16—H16C 109.5
C7—C6—H6 119.1 H16A—C16—H16C 109.5
C5—C6—H6 119.1 H16B—C16—H16C 109.5
C6—C7—C8 120.7 (9) C2—N1—C14 120.0 (8)
C6—C7—H7 119.7 C2—N1—Co1 129.6 (7)
C8—C7—H7 119.7 C14—N1—Co1 110.4 (6)
C9—C8—C13 116.7 (9) C11—N2—C13 118.5 (8)
C9—C8—C7 124.8 (9) C11—N2—Co1 130.6 (6)
C13—C8—C7 118.5 (9) C13—N2—Co1 110.9 (6)
C10—C9—C8 120.1 (10)
N1—C2—C3—C4 0.4 (13) C1—C2—N1—C14 −178.8 (8)
C1—C2—C3—C4 178.9 (9) C3—C2—N1—Co1 −179.3 (6)
C2—C3—C4—C5 −0.7 (13) C1—C2—N1—Co1 2.1 (12)
C3—C4—C5—C14 0.8 (11) C5—C14—N1—C2 0.4 (12)
C3—C4—C5—C6 −177.9 (8) C13—C14—N1—C2 −179.6 (7)
C14—C5—C6—C7 1.9 (12) C5—C14—N1—Co1 179.6 (6)
C4—C5—C6—C7 −179.3 (8) C13—C14—N1—Co1 −0.4 (8)
C5—C6—C7—C8 −1.8 (12) N2—Co1—N1—C2 179.2 (7)
C6—C7—C8—C9 179.9 (8) Br1—Co1—N1—C2 −68.1 (8)
C6—C7—C8—C13 1.6 (12) Br2—Co1—N1—C2 62.1 (7)
C13—C8—C9—C10 −2.0 (12) N2—Co1—N1—C14 0.0 (5)
C7—C8—C9—C10 179.6 (8) Br1—Co1—N1—C14 112.7 (5)
C8—C9—C10—C11 2.6 (13) Br2—Co1—N1—C14 −117.1 (5)
C9—C10—C11—N2 −2.2 (13) C10—C11—N2—C13 1.2 (11)
C9—C10—C11—C12 −179.3 (8) C12—C11—N2—C13 178.4 (7)
C9—C8—C13—N2 1.1 (11) C10—C11—N2—Co1 −177.4 (6)
C7—C8—C13—N2 179.5 (7) C12—C11—N2—Co1 −0.2 (10)
C9—C8—C13—C14 180.0 (7) C8—C13—N2—C11 −0.7 (11)
C7—C8—C13—C14 −1.6 (11) C14—C13—N2—C11 −179.6 (7)
C4—C5—C14—N1 −0.7 (11) C8—C13—N2—Co1 178.2 (6)
C6—C5—C14—N1 178.1 (7) C14—C13—N2—Co1 −0.7 (8)
C4—C5—C14—C13 179.3 (7) N1—Co1—N2—C11 179.1 (7)
C6—C5—C14—C13 −1.9 (11) Br1—Co1—N2—C11 60.8 (7)
N2—C13—C14—N1 0.7 (10) Br2—Co1—N2—C11 −69.2 (7)
C8—C13—C14—N1 −178.2 (7) N1—Co1—N2—C13 0.4 (5)
N2—C13—C14—C5 −179.3 (7) Br1—Co1—N2—C13 −117.9 (5)
C8—C13—C14—C5 1.8 (11) Br2—Co1—N2—C13 112.1 (5)
C3—C2—N1—C14 −0.2 (12)

Footnotes

Supplementary data and figures for this paper are available from the IUCr electronic archives (Reference: HY2596).

References

  1. Akbarzadeh Torbati, N., Rezvani, A. R., Safari, N., Saravani, H. & Amani, V. (2010). Acta Cryst. E66, m1284. [DOI] [PMC free article] [PubMed]
  2. Alizadeh, R., Heidari, A., Ahmadi, R. & Amani, V. (2009). Acta Cryst. E65, m483–m484. [DOI] [PMC free article] [PubMed]
  3. Bruker (2001). SADABS Bruker AXS Inc., Madison, Wisconsin, USA.
  4. Bruker (2007). APEX2 and SAINT Bruker AXS Inc., Madison, Wisconsin, USA.
  5. Ding, C.-F., Miao, Y.-F., Tian, B.-Q., Li, X.-M. & Zhang, S.-S. (2006). Acta Cryst. E62, m1062–m1063.
  6. Fanizzi, F. P., Intini, F. P., Maresca, L., Natile, G., Lanfranchi, M. & Tiripicchio, A. (1991). J. Chem. Soc. Dalton Trans. pp. 1007–1015.
  7. Farrugia, L. J. (1997). J. Appl. Cryst. 30, 565.
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Associated Data

This section collects any data citations, data availability statements, or supplementary materials included in this article.

Supplementary Materials

Crystal structure: contains datablock(s) I, global. DOI: 10.1107/S160053681204367X/hy2596sup1.cif

e-68-m1407-sup1.cif (19KB, cif)

Structure factors: contains datablock(s) I. DOI: 10.1107/S160053681204367X/hy2596Isup2.hkl

e-68-m1407-Isup2.hkl (165.1KB, hkl)

Additional supplementary materials: crystallographic information; 3D view; checkCIF report


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