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Acta Crystallographica Section E: Structure Reports Online logoLink to Acta Crystallographica Section E: Structure Reports Online
. 2012 Oct 20;68(Pt 11):o3191. doi: 10.1107/S1600536812043140

4-[(3-Chloro-2-methyl­phen­yl)imino­meth­yl]phenol

B C Manjunath a, M M M Abdoh b, L Mallesha c, K N Mohana d, N K Lokanath a,*
PMCID: PMC3515282  PMID: 23284502

Abstract

In the title compound, C14H12ClNO, the dihedral angle between the aromatic rings is 39.84 (7)°. In th crystal, mol­ecules are connected by O—H⋯N hydrogen bonds into chains parallel to [001]. In addition, a C—H⋯π contact occurs.

Related literature  

For the bioactivity of the title compound, see: Corke et al. (1979); Gorrad & Manson (1989). For related structures, see: Jothi et al. (2012); Yaeghoobi et al. (2009). graphic file with name e-68-o3191-scheme1.jpg

Experimental  

Crystal data  

  • C14H12ClNO

  • M r = 245.70

  • Orthorhombic, Inline graphic

  • a = 7.5271 (9) Å

  • b = 12.4095 (15) Å

  • c = 12.5800 (14) Å

  • V = 1175.1 (2) Å3

  • Z = 4

  • Mo Kα radiation

  • μ = 0.31 mm−1

  • T = 103 K

  • 0.26 × 0.20 × 0.18 mm

Data collection  

  • Oxford Diffraction Xcalibur Eos diffractometer

  • 6050 measured reflections

  • 2042 independent reflections

  • 1856 reflections with I > 2σ(I)

  • R int = 0.037

Refinement  

  • R[F 2 > 2σ(F 2)] = 0.047

  • wR(F 2) = 0.123

  • S = 1.07

  • 2042 reflections

  • 155 parameters

  • H-atom parameters constrained

  • Δρmax = 0.71 e Å−3

  • Δρmin = −0.46 e Å−3

Data collection: CrysAlis PRO (Oxford Diffraction, 2009); cell refinement: CrysAlis PRO; data reduction: CrysAlis PRO; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008); molecular graphics: Mercury (Macrae et al., 2006); software used to prepare material for publication: publCIF (Westrip, 2010).

Supplementary Material

Crystal structure: contains datablock(s) global, I. DOI: 10.1107/S1600536812043140/kj2211sup1.cif

e-68-o3191-sup1.cif (21.8KB, cif)

Structure factors: contains datablock(s) I. DOI: 10.1107/S1600536812043140/kj2211Isup2.hkl

e-68-o3191-Isup2.hkl (100.5KB, hkl)

Supplementary material file. DOI: 10.1107/S1600536812043140/kj2211Isup3.cml

Additional supplementary materials: crystallographic information; 3D view; checkCIF report

Table 1. Hydrogen-bond geometry (Å, °).

Cg is the centroid of the C11–C16 ring.

D—H⋯A D—H H⋯A DA D—H⋯A
O2—H2⋯N3i 0.84 2.05 2.854 (3) 160
C17—H17CCg ii 0.98 2.73 3.649 (2) 157

Symmetry codes: (i) Inline graphic; (ii) Inline graphic.

supplementary crystallographic information

Comment

The investigation of microbial degradation by hazardous compounds such as anilines containing a methyl and a chlorosubstituent is of interest because of their lipophilic character and affinity to interact with DNA (Gorrad & Manson, 1989).

The ORTEP drawing of the title molecule is shown in Fig. 1. The 4-hydroxybenzylidene system is nearly planar and its geometry is similar to 4-chloro-2-[(E)-2-(4-methoxyphenyl)-ethyliminomethyl]phenol (Yaeghoobi et al., 2009). The dihedral angle between the methylphenol and chloromethylphenylimino ring systems is 39.84 (7)°.

The molecules are connected by O—H···N interactions into chains along the [0 0 1] direction (Fig. 2). There is a weak contact of the type C—H···π [1/2-x,-y,-1/2+z] with a C···Cg distance of 3.649 (2) Å between the methyl group of the chloromethyl ring and the phenol ring.

Experimental

Equimolar concentrations of 4-hydoxybenzaldehyde (0.003 mol) and 3-chloro-2-methylbenzenamine (0.003 mol) were refluxed for 5 h using methanol (25 ml) as solvent. The progress of the reaction was followed by TLC until the reaction was complete. The reaction product was cooled to 273 K. The precipitate was filtered and washed with diethyl ether. The residue was recrystallized from methanol. Brown single crystals were obtained.

Refinement

In the absence of significant anomalous dispersion effects Friedel pairs have been merged. All the hydrogen atoms of the compound are fixed geometrically (O—H = 0.88 Å and C—H= 0.93–0.97 Å) and allowed to ride on their parent atoms.

Figures

Fig. 1.

Fig. 1.

ORTEP diagram of the title compound with 50% probability ellipsoids.

Fig. 2.

Fig. 2.

Packing diagram of the title compound, viewed along [1 - 1 0] direction. O—H···N hydrogen bonds are indicated by dashed lines.

Crystal data

C14H12ClNO F(000) = 512
Mr = 245.70 Dx = 1.389 Mg m3
Orthorhombic, P212121 Mo Kα radiation, λ = 0.71073 Å
Hall symbol: P 2ac 2ab Cell parameters from 2042 reflections
a = 7.5271 (9) Å θ = 2.3–30.6°
b = 12.4095 (15) Å µ = 0.31 mm1
c = 12.5800 (14) Å T = 103 K
V = 1175.1 (2) Å3 Block, brown
Z = 4 0.26 × 0.20 × 0.18 mm

Data collection

Oxford Diffraction Xcalibur Eos diffractometer 1856 reflections with I > 2σ(I)
Radiation source: fine-focus sealed tube Rint = 0.037
Graphite monochromator θmax = 30.6°, θmin = 2.3°
Detector resolution: 16.0839 pixels mm-1 h = −10→7
ω scans k = −17→16
6050 measured reflections l = −16→17
2042 independent reflections

Refinement

Refinement on F2 Primary atom site location: structure-invariant direct methods
Least-squares matrix: full Secondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.047 Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.123 H-atom parameters constrained
S = 1.07 w = 1/[σ2(Fo2) + (0.0838P)2 + 0.0338P] where P = (Fo2 + 2Fc2)/3
2042 reflections (Δ/σ)max < 0.001
155 parameters Δρmax = 0.71 e Å3
0 restraints Δρmin = −0.46 e Å3

Special details

Geometry. Bond distances, angles etc. have been calculated using the rounded fractional coordinates. All su's are estimated from the variances of the (full) variance-covariance matrix. The cell e.s.d.'s are taken into account in the estimation of distances, angles and torsion angles
Refinement. Refinement on F2 for ALL reflections except those flagged by the user for potential systematic errors. Weighted R-factors wR and all goodnesses of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The observed criterion of F2 > σ(F2) is used only for calculating -R-factor-obs etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R-factors based on ALL data will be even larger.

Fractional atomic coordinates and isotropic or equivalent isotropic displacement parameters (Å2)

x y z Uiso*/Ueq
Cl1 0.20725 (8) 0.07415 (5) 0.21487 (5) 0.0206 (2)
O2 −0.2400 (2) 0.06296 (14) 1.08991 (14) 0.0200 (5)
N3 −0.0186 (3) 0.11403 (16) 0.60025 (16) 0.0151 (5)
C4 0.0219 (3) 0.16256 (18) 0.50001 (19) 0.0142 (6)
C5 0.0934 (3) 0.09792 (18) 0.41844 (19) 0.0144 (6)
C6 0.1173 (3) 0.1473 (2) 0.31955 (19) 0.0147 (6)
C7 0.0749 (3) 0.2551 (2) 0.3006 (2) 0.0182 (7)
C8 0.0060 (3) 0.3171 (2) 0.3831 (2) 0.0192 (7)
C9 −0.0203 (3) 0.27089 (18) 0.4822 (2) 0.0165 (6)
C10 0.0205 (3) 0.16597 (19) 0.68499 (19) 0.0157 (6)
C11 −0.0336 (3) 0.13243 (19) 0.79125 (19) 0.0146 (6)
C12 −0.1136 (3) 0.03193 (19) 0.81002 (19) 0.0162 (6)
C13 −0.1794 (3) 0.00693 (19) 0.91011 (19) 0.0154 (6)
C14 −0.1689 (3) 0.08211 (19) 0.99228 (18) 0.0148 (6)
C15 −0.0820 (3) 0.18052 (19) 0.9758 (2) 0.0170 (6)
C16 −0.0153 (3) 0.20481 (19) 0.8757 (2) 0.0161 (6)
C17 0.1424 (3) −0.01811 (19) 0.4369 (2) 0.0191 (7)
H2 −0.28810 0.00190 1.09040 0.0300*
H7 0.09280 0.28580 0.23230 0.0220*
H8 −0.02280 0.39070 0.37150 0.0230*
H9 −0.06730 0.31310 0.53850 0.0200*
H10 0.08860 0.23010 0.67830 0.0190*
H12 −0.12270 −0.01910 0.75400 0.0190*
H13 −0.23160 −0.06160 0.92270 0.0180*
H15 −0.06890 0.23030 1.03260 0.0200*
H16 0.04360 0.27160 0.86450 0.0190*
H17A 0.09600 −0.06240 0.37870 0.0290*
H17B 0.09100 −0.04250 0.50440 0.0290*
H17C 0.27200 −0.02500 0.43980 0.0290*

Atomic displacement parameters (Å2)

U11 U22 U33 U12 U13 U23
Cl1 0.0193 (3) 0.0256 (3) 0.0169 (3) −0.0005 (2) 0.0037 (2) −0.0025 (2)
O2 0.0225 (9) 0.0216 (8) 0.0160 (8) −0.0038 (7) 0.0057 (7) −0.0002 (7)
N3 0.0108 (9) 0.0184 (9) 0.0160 (9) −0.0002 (7) 0.0016 (8) 0.0019 (7)
C4 0.0096 (10) 0.0162 (10) 0.0168 (11) −0.0014 (8) 0.0009 (9) 0.0013 (8)
C5 0.0083 (9) 0.0180 (10) 0.0170 (11) −0.0006 (8) −0.0017 (9) 0.0008 (8)
C6 0.0082 (9) 0.0213 (10) 0.0146 (10) −0.0013 (8) 0.0015 (8) −0.0017 (8)
C7 0.0150 (11) 0.0215 (11) 0.0180 (12) −0.0024 (9) 0.0001 (9) 0.0043 (9)
C8 0.0147 (11) 0.0183 (11) 0.0246 (12) −0.0002 (9) −0.0011 (10) 0.0039 (9)
C9 0.0108 (10) 0.0173 (11) 0.0214 (12) 0.0014 (8) 0.0012 (9) −0.0009 (9)
C10 0.0108 (10) 0.0171 (10) 0.0191 (11) 0.0005 (8) 0.0020 (9) 0.0000 (8)
C11 0.0104 (9) 0.0191 (10) 0.0144 (10) 0.0004 (8) 0.0002 (9) 0.0009 (9)
C12 0.0133 (10) 0.0189 (10) 0.0164 (11) 0.0002 (8) −0.0002 (9) −0.0003 (8)
C13 0.0121 (10) 0.0175 (10) 0.0167 (10) −0.0003 (8) 0.0017 (9) 0.0002 (9)
C14 0.0121 (9) 0.0175 (10) 0.0148 (10) 0.0013 (8) 0.0016 (8) 0.0001 (8)
C15 0.0172 (11) 0.0178 (10) 0.0160 (11) −0.0013 (9) −0.0001 (10) −0.0026 (8)
C16 0.0135 (11) 0.0151 (10) 0.0196 (11) −0.0014 (8) −0.0012 (9) 0.0008 (9)
C17 0.0185 (12) 0.0180 (11) 0.0207 (12) 0.0029 (9) 0.0033 (10) 0.0003 (9)

Geometric parameters (Å, º)

Cl1—C6 1.737 (2) C12—C13 1.388 (3)
O2—C14 1.361 (3) C13—C14 1.395 (3)
O2—H2 0.8400 C14—C15 1.401 (3)
N3—C4 1.430 (3) C15—C16 1.389 (4)
N3—C10 1.280 (3) C7—H7 0.9500
C4—C9 1.399 (3) C8—H8 0.9500
C4—C5 1.409 (3) C9—H9 0.9500
C5—C6 1.398 (3) C10—H10 0.9500
C5—C17 1.504 (3) C12—H12 0.9500
C6—C7 1.396 (3) C13—H13 0.9500
C7—C8 1.392 (3) C15—H15 0.9500
C8—C9 1.386 (4) C16—H16 0.9500
C10—C11 1.458 (3) C17—H17A 0.9800
C11—C16 1.398 (3) C17—H17B 0.9800
C11—C12 1.405 (3) C17—H17C 0.9800
C14—O2—H2 109.00 C11—C16—C15 120.9 (2)
C4—N3—C10 118.2 (2) C6—C7—H7 120.00
N3—C4—C5 118.9 (2) C8—C7—H7 120.00
C5—C4—C9 121.1 (2) C7—C8—H8 120.00
N3—C4—C9 119.8 (2) C9—C8—H8 120.00
C4—C5—C6 116.6 (2) C4—C9—H9 120.00
C4—C5—C17 121.7 (2) C8—C9—H9 120.00
C6—C5—C17 121.7 (2) N3—C10—H10 118.00
Cl1—C6—C5 119.71 (18) C11—C10—H10 118.00
Cl1—C6—C7 117.42 (18) C11—C12—H12 120.00
C5—C6—C7 122.9 (2) C13—C12—H12 120.00
C6—C7—C8 119.2 (2) C12—C13—H13 120.00
C7—C8—C9 119.7 (2) C14—C13—H13 120.00
C4—C9—C8 120.6 (2) C14—C15—H15 120.00
N3—C10—C11 123.8 (2) C16—C15—H15 120.00
C10—C11—C16 119.1 (2) C11—C16—H16 120.00
C12—C11—C16 119.0 (2) C15—C16—H16 119.00
C10—C11—C12 121.8 (2) C5—C17—H17A 110.00
C11—C12—C13 120.3 (2) C5—C17—H17B 109.00
C12—C13—C14 120.2 (2) C5—C17—H17C 109.00
O2—C14—C13 122.0 (2) H17A—C17—H17B 109.00
O2—C14—C15 118.0 (2) H17A—C17—H17C 109.00
C13—C14—C15 120.0 (2) H17B—C17—H17C 109.00
C14—C15—C16 119.5 (2)
C10—N3—C4—C5 138.4 (2) C6—C7—C8—C9 −0.4 (3)
C10—N3—C4—C9 −45.7 (3) C7—C8—C9—C4 0.0 (3)
C4—N3—C10—C11 171.9 (2) N3—C10—C11—C12 8.7 (4)
N3—C4—C5—C6 175.1 (2) N3—C10—C11—C16 −167.4 (2)
N3—C4—C5—C17 −5.2 (3) C10—C11—C12—C13 −173.6 (2)
C9—C4—C5—C6 −0.8 (3) C16—C11—C12—C13 2.5 (3)
C9—C4—C5—C17 178.9 (2) C10—C11—C16—C15 173.2 (2)
N3—C4—C9—C8 −175.3 (2) C12—C11—C16—C15 −2.9 (3)
C5—C4—C9—C8 0.6 (3) C11—C12—C13—C14 1.0 (3)
C4—C5—C6—Cl1 179.21 (17) C12—C13—C14—O2 176.5 (2)
C4—C5—C6—C7 0.5 (3) C12—C13—C14—C15 −4.0 (3)
C17—C5—C6—Cl1 −0.5 (3) O2—C14—C15—C16 −177.0 (2)
C17—C5—C6—C7 −179.2 (2) C13—C14—C15—C16 3.5 (3)
Cl1—C6—C7—C8 −178.66 (18) C14—C15—C16—C11 0.0 (3)
C5—C6—C7—C8 0.1 (3)

Hydrogen-bond geometry (Å, º)

Cg is the centroid of the C11–C16 ring.

D—H···A D—H H···A D···A D—H···A
O2—H2···N3i 0.84 2.05 2.854 (3) 160
C12—H12···O2ii 0.95 2.37 3.204 (3) 146
C17—H17B···N3 0.98 2.43 2.895 (3) 108
C17—H17C···Cgiii 0.98 2.73 3.649 (2) 157

Symmetry codes: (i) −x−1/2, −y, z+1/2; (ii) −x−1/2, −y, z−1/2; (iii) −x+1/2, −y, z−1/2.

Footnotes

Supplementary data and figures for this paper are available from the IUCr electronic archives (Reference: KJ2211).

References

  1. Corke, T. C., Bunce, N. J., Beamount, A. L. & Merrick, R. L. (1979). J. Agric. Food Chem. 27, 644–646.
  2. Gorrad, J. W. & Manson, D. (1989). Xenobiotica, 16, 933–955. [DOI] [PubMed]
  3. Jothi, L., Vasuki, G., Babu, R. R. & Ramamurthi, K. (2012). Acta Cryst. E68, o772. [DOI] [PMC free article] [PubMed]
  4. Macrae, C. F., Edgington, P. R., McCabe, P., Pidcock, E., Shields, G. P., Taylor, R., Towler, M. & van de Streek, J. (2006). J. Appl. Cryst. 39, 453–457.
  5. Oxford Diffraction (2009). CrysAlis PRO. Oxford Diffraction Ltd, Yarnton, England.
  6. Sheldrick, G. M. (2008). Acta Cryst. A64, 112–122. [DOI] [PubMed]
  7. Westrip, S. P. (2010). J. Appl. Cryst. 43, 920–925.
  8. Yaeghoobi, M., Rahman, N. A. & Ng, S. W. (2009). Acta Cryst. E65, o1070. [DOI] [PMC free article] [PubMed]

Associated Data

This section collects any data citations, data availability statements, or supplementary materials included in this article.

Supplementary Materials

Crystal structure: contains datablock(s) global, I. DOI: 10.1107/S1600536812043140/kj2211sup1.cif

e-68-o3191-sup1.cif (21.8KB, cif)

Structure factors: contains datablock(s) I. DOI: 10.1107/S1600536812043140/kj2211Isup2.hkl

e-68-o3191-Isup2.hkl (100.5KB, hkl)

Supplementary material file. DOI: 10.1107/S1600536812043140/kj2211Isup3.cml

Additional supplementary materials: crystallographic information; 3D view; checkCIF report


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