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Published in final edited form as: Vet Parasitol. 2012 Sep 12;191(3-4):218–227. doi: 10.1016/j.vetpar.2012.09.005

Cryptosporidium scrofarum n. sp. (Apicomplexa: Cryptosporidiidae) in domestic pigs (Sus scrofa)

Martin Kváč 1,2,*, Michaela Kestřánová 2, Martina Pinková 3, Dana Květoňová 1, Jana Kalinová 1, Pavla Wagnerová 1,2, Michaela Kotková 1, Jiří Vítovec 2, Oleg Ditrich 1, John McEvoy 4, Brianna Stenger 4, Bohumil Sak 1
PMCID: PMC3525736  NIHMSID: NIHMS410472  PMID: 23021264

Abstract

We describe the morphological, biological, and molecular characteristics of Cryptosporidium pig genotype II and propose the species name Cryptosporidium scrofarum n. sp. to reflect its prevalence in adult pigs worldwide. Oocysts of C. scrofarum are morphologically indistinguishable from C. parvum, measuring 4.81–5.96 µm (mean = 5.16) × 4.23–5.29 µm (mean = 4.83) with a length to width ratio of 1.07 ± 0.06 (n = 400). Oocysts of C. scrofarum obtained from a naturally infected pig were infectious for 8-week-old pigs but not 4-week-old pigs. The prepatent period in 8-week-old Cryptosporidium-naive pigs was 4–6 days and the patent period was longer than 30 days. The infection intensity of C. scrofarum in pigs was generally low, in the range 250-4000 oocysts per gram of faeces. Infected pigs showed no clinical signs of cryptosporidiosis and no pathology was detected. Cryptosporidium scrofarum was not infectious for adult SCID mice, adult BALB c mice, Mongolian gerbils (Meriones unguiculatus), southern multimammate mice (Mastomys coucha), yellow-necked mice (Apodemus flavicollis), or guinea pigs (Cavia porcellus). Phylogenetic analyses based on Small subunit rRNA, actin, and heat shock protein 70 gene sequences revealed that C. scrofarum is genetically distinct from all known Cryptosporidium species.

Keywords: Cryptosporidium scrofarum, Taxonomy, Morphology, Molecular analyses, Transmission studies, Cryptosporidium pig genotype II

1. Introduction

Porcine cryptosporidiosis, which was first described in the USA (Bergeland, 1977; Kennedy et al., 1977), has been reported to occur worldwide. Cryptosporidium parvum was initially considered to be the causal agent based on experimental infection studies undertaken in the 1980s (Moon and Bemrick, 1981; Tzipori et al., 1982; Vítovec and Koudela, 1992). Subsequent molecular epidemiology and experimental infection studies revealed the susceptibility of pigs to a number of species including C. parvum, C. hominis, C. suis, C. felis, and C. meleagridis. Cryptosporidium muris and C. tyzzeri also have been isolated from pigs; however, infectivity could not be confirmed experimentally (Kváč et al., 2012). In addition to the named species, genotypes including Cryptosporidium sp. Eire w65.5, Cryptosporidium rat genotype, C. suis-like, and Cryptosporidium pig genotype II, have been reported in pigs (Langkjær et al., 2007; Zintl et al., 2007). Among these species and genotypes, only C. suis (Morgan et al., 1999; Ryan et al., 2004) and Cryptosporidium pig genotype II appear to be adapted to pigs. Ryan et al. (2003) identified Cryptosporidium pig genotype II based on its unique small subunit rRNA (SSU) gene sequence; however, no biological data have been reported.

Cryptosporidium oocysts have been detected in the faeces or slurry of pigs in Australia (Johnson et al., 2008; McCarthy et al., 2008; Ryan et al., 2003), Brazil (Fiuza et al., 2011), Canada (Budu-Amoako et al., 2012; Farzan et al., 2011; Guselle et al., 2003; Olson et al., 1997; Sanford, 1987), China (Chen et al., 2011; Wang et al., 2010; Yin et al., 2011), Croatia (Bilic and Bilkei, 2006), Czech Republic (Jeníková et al., 2011; Kváč et al., 2009a,c; Vítovec et al., 2006), Denmark (Langkjær et al., 2007; Maddox-Hyttel et al., 2006), England (Featherstone et al., 2010), Germany (Epe et al., 2004; Wieler et al., 2001), Ireland (Zintl et al., 2007), Italy (Canestri Trotti et al., 1984), Japan (Izumiyama et al., 2001), Korea (Rhee et al., 1991), Nigeria (Yatswako et al., 2007), Norway (Hamnes et al., 2007), Spain (Nunez et al., 2003; Quilez et al., 1996; Reinoso and Becares, 2008; Villacorta et al., 1991), Switzerland (Ebeid et al., 2003), Taiwan (Hsu et al., 2008), Trinidad and Tobago (Adesiyun et al., 2001), and USA (Atwill et al., 1997; Bergeland, 1977; Kennedy et al., 1977; Tacal et al., 1987; Xiao et al., 1994; Xiao et al., 2006). Cryptosporidium pig genotype II was reported in domestic pigs in nine countries. In addition, wild boars, calves, marine fish, and humans have been reported as natural hosts of this genotype (Table 1) (Kváč et al., 2009a,b,c; Němejc et al., 2012; Ng et al., 2011; Reid et al., 2010).

Table 1.

Prevalence of Cryptosporidium scrofarum (Cryptosporidium pig genotype II) in various hosts including age-specificity and geographical locations. Genes used to characterise the genotype are presented, GenBank accession number were included where available

Host Location No positive/
examined
Age / category Gene (GenBank accession
number)
Reference
50/646 >9 weeks SSU Ryan et al., 2003
0/123 >3 weeks
Australia 32/156 4 weeks-
6months
SSU Johnson et al., 2008
0/19 sows
2/? unlisted SSU McCarthy et al., 2008
Brazil 2/91 unlisted SSU (GQ924104-05) Fiuza et al., 2011
Canada 46/122
1/2
unlisted
>8 months
SSU, HSP70 Farzan et al., 2011
43/81 1–3 months SSU, HSP70 Budu-Amoako et al., 2012
1/26
10/77
3/5
<1 month
1–2 month
>6 month
SSU (GQ227704, GU254165-
GU254170
Wang et al., 2010
China 16/94 unlisted SSU (HQ844719–28; HQ844729
HQ844734)
Yin et al., 2011
Domestic
pig
12/2323 unlisted SSU (JF710244-52) Chen et al., 2011
36/123 5–6 months Kváč et al., 2009a
0/119 <4 weeks
Czech Republic 5/131 5–8 weeks SSU Kváč et al., 2009b
17/123 >12 week
136/ <6 weeks Jeníková et al., 2011
Denmark 4/29
129/356
<1 month
>1 month
SSU, HSP70 (AY304993) Langkjaer et al., 2007
5/127 4--10 weeks
Ireland 5/121 SSU 10–24 weeks Zintl et al., 2007
0/94 adult
Norway 3/684 unlisted SSU (EF012375), Actin (EF012372
and 74)
Hamnes et al., 2007
Spain 13/75
3/42
1–2 months
2–6 months
SSU (RFLP) Suarez-Luengas et al., 2007
Calf Australia 2/255 unlisted SSU, Actin Ng et al., 2011
Western
school
whiting
Australia 1/364 <4 months SSU Reid et al., 2010
Wild Boar Czech Republic 7/193 adult SSU Němejc et al., 2012
Human Czech Republic 1/1 29-year-old SSU (EU331243) Kváč et al., 2009c

Differences in the age of pigs infected with C. suis and Cryptosporidium pig genotype II have been reported recently. Cryptosporidium suis appears to infect all age categories of pigs, though prevalence is lower in older pigs. Conversely, Cryptosporidium pig genotype II appears to be specific for older pigs (Jeníková et al., 2011; Kváč et al., 2009a,c; Langkjær et al., 2007; Němejc et al., 2012), with a much lower prevalence observed in younger age categories, primarily in pre-weaned piglets (Table 1).

No other names have been used for Cryptosporidium pig genotype II in publications or GenBank. There are 49 sequences for 6 genes available in GenBank (43, 2, 1, 1, 1, and 1 for the SSU, actin, HSP70 (heat shock protein 70), COWP (Cryptosporidium oocyst wall protein), 15 kDa and 23 kDa sporozoite surface antigen, respectively.

We undertook this study to examine the experimental transmission, oocyst morphology, and molecular characteristics of Cryptosporidium pig genotype II. Based on the collective data from this and other studies, which show that Cryptosporidium pig genotype II is genetically distinct from known Cryptosporidium species and uniquely adapted to adult pigs, we propose the species name Cryptosporidium scrofarum n. sp.

2. Materials and Methods

2.1. Source of oocysts for transmission studies

Faecal samples from 3–15-week-old pigs kept on a commercial farm were screened for Cryptosporidium by microscopic examination of faecal smears stained with aniline-carbol-methyl violet (ACMV) (Miláček and Vítovec, 1985) and PCR. The naturally infected 9-week-old pigs (Sus scrofa) were purchased and separately housed. Faecal specimens were collected daily and stored in a 2.5% potassium dichromate solution. Cryptosporidium oocysts were purified for morphology, phylogeny, and infectivity analyses using sucrose gradient (Arrowood and Sterling, 1987) and caesium chloride gradient centrifugation (Kilani and Sekla, 1987). Purified oocysts were stored for up to 4 weeks in PBS with antimycotics and antibiotics at 4°C in darkness. The parasite was confirmed to be the Cryptosporidium pig genotype II by sequence analysis of the SSU gene using previously described methods (Jeníková et al., 2011; Jiang et al., 2005). The number of oocysts administered to animals was determined by hemacytometer counting. The viability of oocysts was examined using an assay previously described by Kváč et al. (2007a). Briefly: the viability of oocysts was determined by propidium iodide (PI) staining (Sauch et al., 1991). Examined oocysts were washed in distilled water (DW; 1×105 oocysts in 100 µl) and mixed with 10 µl of PI (1% solution, SIGMA). After 30 min of incubation at room temperature in the dark, the oocysts were washed twice with DW. Oocyst viability was examined using fluorescence microscopy (filter 420 nm, Olympus IX70). A total of 5×100 oocysts was counted.

2.2. Oocyst morphology

Oocysts were examined using differential interference contrast (DIC) microscopy, brightfield microscopy following ACMV staining, and epifluorescence microscopy following labelling with genus-specific FITC-conjugated antibodies (Cryptosporidium IF Test, Crypto cel, Medac) (Olympus IX70 microscope; Olympus CZ, Czech Republic). Morphology and morphometry were determined using digital analysis of images (M.I.C. Quick Photo Pro v.1.2 software; Optical Service, Czech Republic) collected using an Olympus Camedia C 5060 WIDEZOOM 5.1 megapixel digital camera (Optical Service). A 20 µl aliquot containing 100,000 purified oocysts was used for each measurement. Length and width of oocysts (n = 100) were measured under DIC at × 1,000 magnification. The shape index and length-to-width ratio of each oocyst was calculated. As a control, the morphometry of C. parvum (n = 100) from a naturally infected 30-day-old Holstein calf was measured by the same person using the same microscope. A photomicrograph of C. scrofarum oocysts observed by DIC, ACMV and IFA was deposited as a phototype at the Institute of Parasitology, Biology Centre of the Academy of Sciences of the Czech Republic.

2.3. DNA extraction and molecular analyses

Total DNA was extracted from 200 mg of faeces, 50 µl of purified oocysts, or 200 mg of tissue by bead disruption for 60 s at 5.5 m/s using 0.5 mm glass beads in a FastPrep®–24 Instrument (MP Biomedicals, CA, USA) followed by isolation/purification using a commercially available kit in accordance with the manufacturer’s instructions (QIAamp! DNA Stool Mini Kit or DNeasy! Blood & Tissue Kit, Qiagen, Hilden, Germany). Purified DNA was stored at −20°C prior to being used for PCR.

A nested PCR approach was used to amplify a region of the SSU (~ 830 bp; Jiang et al., 2005; Xiao et al., 1999) and HSP70 genes (~ 325 bp; Morgan et al., 2001). A semi-nested PCR was used to amplify the actin gene (~ 619 bp; this study). Three primers were designed using the pig genotype II sequence in Genbank (EF012374). The forward primer for both primary and secondary reactions was ScrofActinFA (TGT AGG TGA CGA GGC TCA ATC CAA). ScrofActinRA (ATC GAT TGG AAA GTG GTC TCG CCA) and ScrofActinRB (TTC TGG GCA CCT AAA TCT CTC GCT) were used as reverse primers in the primary and secondary reactions, respectively. The primary PCR reactions were carried out in a volume of 100 µl containing 1 µl of DNA template (or water as a negative control), 1X PCR buffer, 1.5 mM MgCl2, 200 µM dNTPs, 0.2 µM of each primer, and 2.5U of Taq DNA polymerase (Promega GoTaq Flexi). Secondary reactions were carried out under similar conditions with the exception that 2 µl of primary product was used as template. PCR reactions were run in a thermo cycler (Eppendorf Mastercycler gradient) with an initial denaturation of 94°C for 5 min, followed by 35 cycles of 94°C for 45 s, 57°C for 45 s, 72°C for 1 min. A final elongation step of 72°C for 10 min was included to ensure complete extension of amplified products. Conditions were the same for both primary and secondary reactions. In order to distinguish C. scrofarum from C. suis in mixed infections, a C. scrofarum-specific forward primer was used in secondary PCR amplifications (Jeníková et al., 2011). DNA from C. scrofarum and C. hominis were used as positive and negative controls, respectively. Secondary PCR products were detected by agarose gel (1.5%) electrophoresis, visualized by ethidium bromide staining (0.2 µg/ml), and extracted using QIAquick! Gel Extraction Kit (Qiagen). Purified secondary products were sequenced in both directions with an ABI 3130 genetic analyser (Applied Biosystems, Foster City, CA) using the secondary PCR primers and the BigDye1 Terminator V3.1 cycle sequencing kit (Applied Biosystems, Foster City, California) in 10 µl reactions. The identity of C. parvum used for morphological analyses was verified using sequencing of SSU (data not shown).

2.4. Phylogenetic analyses

The nucleotide sequences of each gene obtained in this study were edited using the programme ChromasPro 1.5 (Technelysium, Pty, Ltd.) and were aligned with each other and with reference sequences from GenBank using ClustalX 2.0.6. Alignment adjustments were made manually to remove artificial gaps using BioEdit. Phylogenetic analyses were performed using the software MEGA5 (Tamura et al., 2011). Neighbour joining (NJ), maximum parsimony (MP), and maximum likelihood (ML) trees were constructed. All ambiguous positions were removed for each sequence pair. The reliability of branches in trees was assessed using the bootstrap analysis with 1000 pseudo-replicates, with values above 50% reported. Phylograms were drawn using the MEGA5 and were manually adjusted using CorelDrawX5. SSU, actin, and HSP70 sequences have been deposited in GenBank under the accession numbers JX424840, JX424841, and JX424842, respectively.

2.5. Transmission studies

2.5.1. Animals

Five 8-week-old adult SCID mice (strain C.B-17), BALBc mice (Charles River, Germany), Mongolian gerbils (Meriones unguiculatus) (Charles River, Germany), southern multimammate mice (Mastomys coucha), yellow-necked mice (Apodemus flavicollis), guinea pigs (Cavia porcellus) (Institute of Parasitology, Biology Centre of the Academy of Sciences of the Czech Republic, Czech Republic), and 4- and 8-week-old pigs (Sus scrofa) (3 animals per group; purchased from the farm operated by the Faculty of Agriculture, University of South Bohemia in České Budějovice, Czech Republic) were used for experimental infection studies.

2.5.2. Experimental design

To prevent environmental contamination with oocysts, laboratory rodents were housed in plastic cages with sterilized wood-chip bedding situated in flexible film isolators (BEM, Znojmo, Czech Republic) with high-efficiency particulate air filters. The mice were supplied with a sterilized diet (TOP-VELAZ, Prague, Czech Republic) and water ad libitum.

Pigs were individually housed in 5 m2 pens with concrete walls and floor in an isolated building. Water and feeding mixture were available ad libitum. Rodents (five animals per group) were each inoculated orally by stomach tube with 1,000,000 purified oocysts suspended in 200 µl of dH2O. Pigs (three animals in each category) received the same infection dose in a 20 ml suspension via syringe.

Faecal samples from all experimental animals were collected daily for 30 days post infection (DPI). Samples were stained with aniline-carbol-methyl violet (Miláček and Vítovec, 1985) and the presence of Cryptosporidium specific DNA was confirmed using nested PCR targeting the SSU gene. Infection intensity was reported as the number of oocysts per gram (OPG) of faeces as previously described (Kváč et al., 2007b).

2.5.3. Clinical and pathomorphological examinations

A complete examination of all gastrointestinal organs was conducted at necropsy. Tissue specimens of the gastrointestinal tract were sampled and processed for histology according to Kváč and Vítovec (2003) and for PCR analyses (see chapter 2.3.). Histology sections were stained with haematoxylin and eosin (HE), Wolbach’s modified Giemsa stain, alcian blue, and genus-specific FITC conjugated monoclonal antibodies targeting Cryptosporidium oocyst wall antigens (Cryptosporidium IF Test, Crypto cel, Medac).

2.5.4. Animal care

Animal caretakers wore new disposable coveralls, shoe covers, and gloves every time they entered the buildings. All wood-chip bedding, pig faeces, and disposable protective clothing were sealed in plastic bags, removed from the buildings and incinerated. All housing, feeding, and experimental procedures involving pigs, laboratory mice of different strains, Mongolian gerbils, southern multimammate mice, yellow-necked mice, and guinea pigs were conducted under protocols approved by the Institute of Parasitology, Biology Centre of the Academy of Sciences of the Czech Republic and Institute and National Committees (Protocol No. 071/2010).

3. Results

3.1 Experimental transmission studies

Cryptosporidium scrofarum was not detected by microscopy or PCR in the faeces of 4-week-old pigs following experimental infection. Conversely, sporadic oocyst shedding was detected in 8-week-old pigs beginning at 6–7 DPI and continuing for the duration of the study. Cryptosporidium scrofarum DNA was detectable in faeces by PCR beginning at 3 DPI and continuing for the duration of the study. Infection intensity was generally less than 2000 oocysts per gram of faeces (Figure 1). Infected pigs showed no clinical signs of disease and pigs necropsied at 30 DPI showed no macroscopic signs of intestinal cryptosporidiosis. Histological examination of the gastrointestinal tract of animals infected with C. scrofarum revealed the presence of developmental stages primarily attached to the microvillar border along small intestine with a predilection for the jejunum and ileum. The ratio of infected to non-infected glands in in the jejunum and ileum was approximately 1:200. The proportion of infected glands was much lower or developmental stages were absent in other parts of the small and large intestine. However, C. scrofarum DNA was detected by PCR (Table 2). No pathological changes were observed.

Figure 1.

Figure 1

Course of infection of Cryptosporidium scrofarum in 4- and 8-week-old pigs based on coprological examination of faeces.

Table 2.

Presence of developmental stages in gastrointestinal tract of animals experimentally infected with Cryptosporidium scrofarum.

Host and category Stomach Duodenum Jejunum Ileum Caecum Colon Rectum
HS PCR HS PCR HS PCR HS PCR HS PCR HS PCR HE PCR
4-week-old pigs
+ + + +
8-week-old pigs + + + + + +
+ + + + + + +
SCID mice
BALB / c mice
Mastomys coucha
Apodemus flavicollis
Cavia porcellus
Meriones unguiculatus

+ presence of Cryptosporidium developmental stages or specific DNA; − absence of Cryptosporidium developmental stages or specific DNA; PCR - polymerase chain reaction; HS - histology sections.

Cryptosporidium scrofarum was not detected by microscopy or PCR in the faeces of Mus musculus (SCID and BALB/c), Meriones unguiculatus, Mastomys coucha, Apodemus flavicollis, or Cavia porcellus following experimental infection. Histological and molecular examination of gastrointestinal tract tissue from these rodents did not reveal the presence of Cryptosporidium developmental stages.

3.2. Molecular characterization

Isolates from naturally and experimentally infected pigs shared 100% sequence identity at the SSU, actin, and HSP70 loci. SSU and HSP70 sequences were identical to GenBank sequences EU331243 and DQ833282, respectively. The actin sequence was identical to a sequence from a pig isolate in Norway (GenBank: EF012374) with the exception of three polymorphisms, one of which was non-synonymous. SSU, actin, and HSP70 sequences from the faeces of positive pigs were 100% identical to sequences from isolates used for infection. Neighbour joining, maximum likelihood, and maximum parsimony trees constructed from SSU, actin, and HS70 sequences support the placement of C. scrofarum in a cluster with C. ryanae, C. xiaoi, and C. bovis (Figure 2).

Figure 2.

Figure 2

Phylogenetic relationships between Cryptosporidium scrofarum (highlighted and underlined) and other Cryptosporidium spp. as inferred by a neighbour-joining analysis of A) the SSU (753 base positions in the final dataset), B) actin (586 base positions in the final dataset) and C) Heat Shock Protein 70 (323 base positions in the final dataset) genes. The percentage of replicate trees in which the associated taxa clustered together in the bootstrap test (1,000 replicates). Numbers at the nodes represent bootstrap values for the nodes gaining more than 50% support. Scale bar included in each tree.

3.3. Oocyst morphology

Oocysts of C. scrofarum were similar in size to C. parvum, measuring 4.81–5.96 µm (mean = 5.16) × 4.23–5.29 µm (mean = 4.83) with a length-to-width ratio of 1.07 ± 0.06 (n = 4×100) (Fig. 3A and Table 3). Oocysts of C. scrofarum recovered from infected pigs were morphologically similar to those used for infection (Table 3). Oocysts in faecal smears showed typical Cryptosporidium ACMV staining characteristics (Fig. 3B). Fixed C. scrofarum oocysts labelled with FITC conjugated anti-Cryptosporidium oocyst wall antibody and examined by epifluorescence microscopy displayed typical apple green, halo-like fluorescence (Fig. 3C).

Figure 3.

Figure 3

Cryptosporidium scrofarum oocysts in A) differential interference contrast microscopy and stained by B) aniline-carbol-methyl violet and C) anti-Cryptosporidium FITC-conjugated antibody. Bar = 10 µm.

Table 3.

Morphometry of Cryptosporidium scrofarum and C. parvum oocysts

Length (μm)
Width(μm)
Isolate Range Mean
(SD)
Range Mean
(SD)
Shape
index (SD)
Cryptosporidium scrofarum naturally infected a 9-week-old pig 4.79 –5.80 5.20 ±0.20 4.12 –5.15 4.91 ±0.18 1.08 ± 0.05
Cryptosporidium scrofarum experimentally infected a 8-week-old pig no. 1 4.83 –5.96 5.18 ±0.20 4.23 –5.27 4.82 ±0.19 1.06 ± 0.07
Cryptosporidium scrofarum experimentally infected a 8-week-old pig no. 2 4.76 –5.89 5.16 ±0.23 4.19 –5.29 4.83 ±0.21 1.07 ± 0.06
Cryptosporidium scrofarum experimentally infected a 8-week-old pig no. 3 4.89 –5.71 5.12 ±0.22 4.21 –5.31 4.85 ±0.22 1.08 ± 0.05
Cryptosporidium parvum from natural infection in a 30-day-old pig 4.42 –6.06 5.35 ±0.33 4.21 –5.58 4.86 ±0.39 1.11 ± 0.08

4. Discussion

Based on morphology, C. scrofarum oocysts obtained from naturally and experimentally infected pigs in the present study were indistinguishable from C. parvum and larger than oocysts of C. bovis (4.89 × 4.63 µm), C. ryanae (3.16 × 3.73 µm), and C. xiaoi (3.94 × 3.44 µm) (Fayer and Santin, 2009; Fayer et al., 2005, 2008). Other C. scrofarum oocyst characteristics including wall thickness and inner structure were not different from the C. parvum oocysts examined in this or other studies (Upton and Current, 1985; Vítovec et al., 2006).

It is unclear whether C. scrofarum can be distinguished from C. suis, the other pig-adapted species, based on oocyst morphology alone. Ryan et al. (2004) reported that C. suis oocysts had a similar morphology to C. parvum; however, Vítovec et al. (2006) found that C. suis oocysts were larger than C. parvum and, by extension, would be larger than C. scrofarum.

Cryptosporidium scrofarum, previously named Cryptosporidium pig genotype II, has been detected in domestic pigs and wild boars in at least 19 countries (see introduction). Most reported infections have been in pigs, with the exception of sporadic infections in a human, a calf, and Western school whiting (Kváč et al., 2009b; Ng et al., 2011; Reid et al., 2010). We have shown that a number of rodents are not susceptible to experimental infection with C. scrofarum. These data collectively support a conclusion that C. scrofarum is relatively specific for pigs. Furthermore, experimental data from the present study show that 8-week-old but not 4-week-old pigs are susceptible to infection. These data verify the age specificity hypothesis that was predicated on molecular epidemiology studies (Jeníková et al., 2011; Johnson et al., 2008; Kváč et al., 2009a,c; Langkjær et al., 2007).

Cryptosporidium scrofarum has a prepatent period of 4–6 DPI, which is longer than the prepatent periods observed in its closest relatives including C. xiaoi (7–8 DPI), C. ryanae (11 DPI), and C. bovis (16 DPI) (Fayer and Santin, 2009; Fayer et al., 2008; Fayer et al., 2005). The reported prepatent period of C. suis in pigs ranges from 2–9 days (Enemark et al., 2003; Vítovec et al., 2006; Xiao et al., 1994). In agreement with previous observations, pigs infected with C. scrofarum showed no clinical signs of disease. Similar to C. ryanae, C. scrofarum infections are characterised by shedding of a low number of oocysts (Fayer et al., 2008).

Phylogenetic analyses based on SSU, actin and HSP70 gene sequences show that C. scrofarum is genetically distinct from C. suis and forms a cluster with C. ryanae, C. bovis and C. xiaoi. At the SSU locus, C. scrofarum is 97.3%, 97.4%, and 97.6% similar to C. ryanae, C. xiaoi, and C. bovis, respectively. In contrast, C. scrofarum and C. suis are only 92.9% similar at the SSU locus. These similarities are less than the similarities between recognized Cryptosporidium species including C. andersoni and C. muris (99.1% at the SSU locus), and C. parvum and C. tyzzeri (99.0% at the SSU locus). At the actin locus, C. scrofarum was 85.3%, 87.0%, 87.2%, and 86.6% similar to C. suis, C. ryanae, C. xiaoi, and C. bovis, respectively. This compares to the 99.0% similarity between C. andersoni and C. muris and 99.1% similarity between C. parvum and C. tyzzeri. At the HSP70 locus, C. scrofarum was 81.1%, 86.6%, 88.2%, and 87.3% similar to C. suis, C. ryanae, C. xiaoi, and C. bovis, respectively. This compares to the 98.1% similarity between C. andersoni and C. muris and the 99.3% similarity between C. parvum and C. tyzzeri at this locus.

In conclusion, oocyst morphology, nucleotide sequence, and infectivity data demonstrate significant biological and taxonomic differences between Cryptosporidium pig genotype II and recognized Cryptosporidium species. According to ICZN and criteria for naming Cryptosporidium species (Xiao et al., 2004) we propose the name Cryptosporidium scrofarum.

Taxonomic summary

Cryptosporidium scrofarum n. sp.

Diagnosis: Oocysts are shed in faeces fully sporulated. Sporulated oocysts (n = 4×100) measure 4.81–5.96 µm (mean = 5.16) × 4.23–5.29 µm (mean = 4.83) with a length-to-width ratio of 1.07 ± 0.06. Four sporozoites are present in each oocyst. Endogenous stages are unknown.

Type host: Pig (Sus scrofa).

Other natural hosts: Human (Homo sapiens) (Kváč et al., 2009b), calf (Bos taurus) (Ng et al., 2011), wild boar (Sus scrofa) (Němejc et al., 2012), and Western school whiting (Sillago vittata) (Reid et al., 2010).

Experimental transmission: Attempts to infect common laboratory mice (Mus musculus), Mongolian gerbils (Meriones unguiculatus), southern multimammate mice (Mastomys coucha), yellow-necked mice (Apodemus flavicollis), and guinea pigs (Cavia porcellus) were unsuccessful.

Prepatent period: 4–6 days (this study).

Patent period: More than 30 days (this study).

Age specificity: Cryptosporidium scrofarum n. sp. is infectious for post-weaned piglets only (this study).

Type locality: Czech Republic.

Other localities: Worldwide.

Site of infection: Duodenum, jejunum, ileum, caecum, and colon.

Material deposited: A phototype, description of oocysts and DNA are deposited at the Institute of Parasitology, Biology Centre of the Academy of Sciences of the Czech Republic.

DNA sequences: partial sequences of SSU, actin, and HSP70 genes were submitted to GenBank under the accession numbers JX424840, JX424841, and JX424842, respectively.

Etymology: this species was first named Cryptosporidium scrofarum from the Latin noun “scrofa” (meaning a breeding sow) according to ICZN Article 11.9.1–3 as a plural in the genitive case; as it appears to be adapted to adult pigs.

Acknowledgements

The authors would like to thank Pavla Vandasová, Lenka Hlásková, and Cathy Giddings for expert technical assistance. Special thanks also go to the farmers for their participation. The authors would like to especially thank Jana Karlíčková for assistance during the breeding of pigs. This study was funded by projects from the Ministry of Education, Youth and Sports of the Czech Republic (LH11061 and MSM 6007665806), the Grant Agency of University of South Bohemia (022/2010/Z) and NIH Grant Number 2P20 RR015566 from the National Center for Research Resources.

Footnotes

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