Abstract
A five-step transformation of D-glucosamine – commencing with indium-mediated Barbier reaction, without isolation of intermediates – into (R,R)-2-aminohex-5-en-1,3-diol is described. The latter is a useful synthon for assembly of L-threo-sphingoid bases; long-chain aminoalkanols and aminoalkanediols with configurations antipodal to that found in mammalian D-erythro-sphingosine, but prevalent among invertebrate-derived sphingolipids. The utility of the method is demonstated by the first total synthesis of rhizochalinin C, the long-chain, ‘two-headed’ sphingoid base aglycone of the natural product rhizochalin C from the marine sponge Rhizochalina incrustata.
Introduction
Sphingosine (2-amino-octadec-4-en-1,3-diol) and related mammalian sphingosines possess the (2S,3R) configuration (D-erythro), but microbe and invertebrate-derived sphingoid bases exhibit broad stereochemical heterogeneity.1,2 L-threo-sphingoid bases have been reported from marine sponges, algae and tunicates. ‘Two-headed’ sphingolipids comprised of C28–C30 chains functionalized at each terminus as aminoalkanols or aminoalkane-diols3 span almost the complete set of permutations (n = 16) of the four stereocenters. For example, the Madagascan sponge Rhizochalina incrustata contains C28 α,ω-bi-functionalized sphingoid bases (2R,3R,26R,27R)-rhizochalin C (1b)3f (the 3-β-galacotoside of rhizochalinin C, 1a) and the pseudo-C2 symmetric rhizochalin (1c).3a The head groups of the latter compounds are both L-threo, but oceanapiside (2b) has a hetergeneous configuration: the 2-amino-1,3-diol head group is D-erythro while the ‘deoxy’ head group is L-threo. Monofunctionalized L-threo sphingoid base from marine organisms include halisphingosine A (3a)4 and its corresponding 6-deoxy derivative 3b5 from two different species of Haliclona and (2R,3R)- and (2R,3S)-aminotetradec-5,7-dien-3-ols from Xestospongia sp.,6 while crucigasterins from the tunicate, Pseudodistoma crucigaster, have the L-erythro-(2R,3S)-configuration.2h
Modified sphingoid bases have attracted interest because of their potent biological activity. The α,ω-bifunctionalized 2a – and to a greater extent, the aglycone oceanin (2a) – exhibit significant antifungal activity against the pathogenic species Candida albicans, Fluconazole-resistant C. albicans, C. glabrata and other species.7 Selective inhibitors of D-sphingosine kinase isoforms, SK1 and SK2, are attractive targets as anti-cancer and anti-inflammatory agents.8 Fingolimod (FTY720, 4), an analog of the myriocin from Mycelia sterilia9 and other fungal species, is an anti-inflammatory agent and potent inhibitor of SK2; in 2010 it was approved for treatment of multiple sclerosis.10

Synthesis of sphinganine and related sphingoid bases has been extensively reviewed.11 Approaches to D-erythro-2-aminoalkanols and 2-aminoalkan-1,3-diols utilizing chiral pool starting materials commonly begin with natural L-serine and L-alanine, respectively, however, preparation of L-sphingoid bases require more expensive D-amino acids. Here, we disclose an optimized procedure for rapid diastereoselective access to L-threo-sphingoid base synthons using a remarkable five-step conversion of unprotected D-glucosamine into useful D-serine synthons based on In°-mediated allylation. The method was successfully applied to 1a; the first synthesis of a member of the family of two-headed sphingolipids.
Inexpensive D-glucosamine has been exploited for preparation for L-serine synthons through oxidative degradation to N-Boc-L-serinal that re-functionalizes C-3 to a carboxaldehyde (Figure 1).12 Conceptually, inverting the orientation of oxidative remodeling of D-glucosamine by alkylation at C-1 followed by periodate cleavage of the C-3–C-4 bond and reductive workup would result in D-serine synthons.13 Organoindium compounds have found utility in homologation of aldohexoses and ketoses, largely due to their compatibility with water.14 Carbon-carbon bond formation at C-1 of D-glucosamine is conveniently carried out by Barbier-type allylation in the aqueous solvents necessary to solubilize D-glucosamine. Whitesides15 and Chan16b had earlier shown aldoses and some ketoses underwent Barbier allylation with allyl bromide (refluxing THF) in the presence of Sn°, however, N-acetyl-D-glucosamine and N-acetyl-D-mannosamine were inert under these conditions.17 In contrast, N-acetyl-D-mannosamine was allylated in high yield (90%) with In° and the more reactive ethyl α-bromomethacrylate in warm acidic ethanol (HCl, 55 °C), and subsequently converted to sialic acid (Neu5Ac).18 Paquette demonstrated Barbier allylation of N-acetyl-D-mannosamine with allyl bromide (In°, 0.5 M NH4Cl, aqu, 25 °C) with high threo selectivity (8.6:1), albeit in low yield (31%).19 Amino acid derived N-Cbz-α-aminoaldehydes undergo Barbier-type allylations under a variety of conditions in yields up to 82%,20 or N-Boc-α-aminoaldehydes up to 90%20 – again mostly with threo selectivity – but erythro selectivity with Garner’s aldehyde.21 Critical evaluation of these reports suggest that allylations of amino sugars under aqueous conditions suffer from lower yields compared to aldohexoses, or succeed only with N-acyl-2-amino-2-deoxyhexoses which limits their utility for sphingoid base synthesis.
Figure 1.

Conversion of D-glucosamine by oxidative remodeling to N-Boc-L-serinal (see Ref. 12), and D-serine synthons by Barbier allylation-oxidation (this work). Locant numbering is based on D-glucosamine.
Results and Discussion
In order to investigate methodology to improve the scope of the In°-mediated allylation reaction of aldohexoses, we further explored the Barbier allylation of D-glucosamine and its derivatives under aqueous conditions (Table 1). Various N-protected glucosamines (1–2 mmol) were reacted with allyl bromide in the presence of powdered In° (4:1 THF-H2O, reflux) to yield mixtures of the 2-amino-1,3-hexenols diastereoisomers, threo-i and erythro-ii (Table 1) in varying diastereomeric ratios that always favored threo-i under chelation control, as noted earlier.15,20 The product yields were variable (38–78%) with the best yield obtained with N-Boc-D-glucosamine (entry 1, 78%). Reaction of N-Tosyl D-glucosamine under similar conditions, but replacement of the solvent with THF:H2O mixtures of various ratios (1:4 to 4:1, not shown) resulted in similar or lower yields (9–40%).
Table 1.
Barbier reaction of N-protected D-glucosamine with In° and allyl bromide.a
Conditions: 1–2 mmol D-glucosamine, 4:1 THF:H2O, reflux, In° powder (99.99%, 230–400 mesh, 4 equiv) and allyl bromide (6 equiv). Yields were calculated by 1H NMR integration of the allyl vinyl signals and the N-Me signals of caffeine added as an internal standard.
for N-Boc-mannosamine 88%, Ref. 15b
Pht = phthalimido.

We found, to our delight, that In°-mediated allylation of unprotected D-glucosamine gave the best results (Table 2) approaching quantitative yields. Optimization of conditions (Table 2, entry 4) resulted in excellent conversion of D-glucosamine (1–2 mmol) to diastereomeric allylation products (96% yield, dr (threo:erythro)=7.5:1) in the presence of In° powder (4 equiv) and excess allylbromide (6 equiv) at reflux (100 °C) in aqueous dioxane (1,4-dioxane–H2O 2:1).
Table 2.
Barbier reaction of D-glucosamine with In° and allyl bromide in aqueous 1,4-dioxane.
| Entry | 1,4-dioxane:H2O | threo:erythro | Yield |
|---|---|---|---|
| 1 | 0:100 | 1.8:1 | 21% |
| 2. | 25:75 | 2.0:1 | 39% |
| 3. | 50:50 | 4.4:1 | 60% |
| 4. | 67:33 | 7.5:1 | 96% |
| 5. | 83:17 | 7.0:1 | 99% |
| 6. | 94:6 | 5.7:1 | 95% |
Conditions: 100 °C. PG = H. For other conditions, see reaction equation and footnote in Table 1.
Paquette and co-workers reported higher threo-product in In°-mediated allylation of α-oxygenated-aldehydes upon addition of metal salts, (Et)4NX and NH4Cl.22 In contrast, we found higher amounts of erythro ii upon allylation of D-glucosamine in the presence of metal salts, particularly MgCl2 (i:ii dr= 3.5:1, 94%, Entry 5), with comparable yields.
Scale-up of the 5-step conversion of D-glucosamine (0.5 – 3 g) was optimized (Scheme 1) as follows. In°-mediated allylation of D-glucosamine followed by sequential periodate cleavage (NaIO4, H2O), reduction (NaBH4, MeOH), without isolation of the intermediates from the aqueous milieu, and conversion of the resulting 1,3-diols to acetonides (2,2-dimethoxypropane, CH2Cl2, cat. CSA) gave threo-5a23 and erythro-5b (dr = 7.5:1). Unlike allylation products i and ii, the latter compounds were sufficiently non-polar to allow recovery and separation by silica chromatography (51% total yield, dr 7:1 over 5 steps).24 The 5-step conversion could be scaled up to 5.6 mmol of D-glucosamine (51% overall yield of 5a) or to 17 mmol, albeit with some loss in yield (45%) and only slight erosion of dr (7:1 5a:5b).
Scheme 1.
The products 5a and 5b are useful synthons for preparation of α,ω-dimeric sphingoid bases such as rhizhochalinin C (2) according to the retrosynthetic analysis depicted in Figure 2.
Figure 2.
Retrosynthesis of rhizochalinin C (1a).
The allyl groups corresponding to left-hand and right-hand halves of the target molecule can be conveniently coupled by olefin cross-metathesis with suitable differentiatiation by chain length and ω-functionalization for final unification of the two halves by Horner-Emmons-Wadsworth reaction and global deprotection-hydrogenation to give 1a. A convergent advantage arises by derivation of both halves of rhizochalinin C from the allyl substituted compounds 5a and 6a that are procured from the same Barbier allylation of D-glucosamine followed by differential protections of NH2 and OH groups.
The left-hand half of rhizochalinin C was elaborated as shown in Scheme 2. Compound 5a was subject to olefin cross-metathesis with tetradec-13-enyl acetate in the presence of Grubbs II catalyst to provide, after methanolysis (NaOMe, MeOH), primary alcohol 7 (51%, 2 steps) as an inconsequential mixture of E/Z isomers (9.6:1) which was carried forward as such.25 Oxidation of 7 (Dess-Martin periodinane) to the corresponding aldehyde 8 (80%) followed by addition of the anion derived from diethyl methylphosphonate (n-BuLi, −78 °C, THF)26 and Dess-Martin oxidation delivered the β-ketophosphonate 9 (64%, 2 steps).
Scheme 2.
Elaboration of the left-hand half of rhizochalinin C (1a). *Major geometrical isomer is depicted E:Z = 9.6:1.
The right-hand half of 1a was prepared as shown in Scheme 3. The multi-step Barbier allylation-oxidation sequence (Scheme 1) was repeated on D-glucosamine except for a different N-protecting group ((Boc)2O, NaHCO3, aq) and conversion of the 1,3-diol to a benzylidene acetal (benzaldehyde dimethyl acetal, CSA) to provide 6 in 35% over 5 steps. Differential C-O bond cleavage of the benzylidene group was achieved under two sets of conditions: reduction with in situ generated alane (AlCl3, LiAlH4, CH2Cl2, 0 °C, 98%)27 or DIBAL-H (toluene, 0 °C, 67%) to give 10.
Scheme 3.
Elaboration of the right-hand half of rhizochalinin C (1a). †Major geometrical isomer is depicted, E:Z = 7:1.
The alcohol 10 was transformed into the phenylthio ether to give 11 (n-Bu3P, (PhS)2, 88%) in preparation for later reductive removal. Olefin cross-metathesis of 11 with 4-penten-1-yl acetate (Grubbs II cat.,30 CH2Cl2, reflux) followed by methanolysis (NaOMe, MeOH) gave primary alcohol 12 as an inconsequential mixture of geometrical isomers (E:Z = 7:1, 85%, 2 steps) which was carried forward without separation. Reduction of 12 (Ra-Ni) delivered protected threo-2-amino-3-alkanol 13 (88%). Oxidation of 13 to aldehyde 14 (Dess-Martin, 85%) completed the right-hand half of 1a and set the stage for coupling of the two segments.
Horner-Emmons-Wadsworth reaction of aldehyde 14 and phosphonate 9 (Scheme 4) under Paterson conditions28 (Ba(OH)2, THF) gave the α,β-unsaturated ketone 15 as a mixture of E/Z isomers (88%), but exclusively E at C-19, C-20. Global deprotection of compound 15 (10M HCl, MeOH, H2 2 atm, Pd-C) gave 1a•2HCl. Purification of the latter salt under basic conditions (silica, flash chromatography, 9:4:1 CHCl3, MeOH, NH4OH aqu.) afforded the free base rhizochalinin C (1a) as a single stereoisomer (87%). The 1H NMR, 13C NMR, [α]D, HRMS data of the synthetic 1a matched those of the algycone derived from natural rhizochalin C (1b). Finally, the CD spectrum of the tetra-benzoyl derivative 16 (Figure 3) prepared from synthetic 1a (BzCl, pyridine) was identical in sign and magnitude to that prepared in two steps from naturally-derived 1b,3b confirming the original assignment by deconvolution of CD exciton coupling3c and demonstrating stereochemical integrity (>95% ee) of the final synthetic product.
Scheme 4.

Coupling of left-hand and right-hand halves and global deprotection to give rhizochalinin C (1a). Major geometrical isomer of 15 is depicted [C-5, C-6 E:Z = 9.6:1; C-23, C-24, E:Z = 7:1].
Figure 3.
CD spectra (CH3OH, 24 °C) of (a) naturally-derived 16 and (b) synthetic 16.
In conclusion, we have demonstrated a practical and versatile preparation of D-threo serine-related synthons in good yield by a five-step conversion of D-glucosamine. The latter was exploited for a bidirectional bond construction and convergent assembly of rhizochalinin C (1a),3 the first total synthesis of a member of the marine-derived ‘two-headed’ sphingolipids.3f The method should find utility in the synthesis of other L-threo sphingoid bases that is the subject of ongoing research in our laboratories to be reported in due course.
Experimental Section
General Experimental Procedures
General experimental procedures are described in the Supporting Information and elsewhere.29 13C NMR signal multiplicities (CH3, CH2, CH, Cq) were determined from DEPT 90 and DEPT 135 experiments.
General procedure for Indium-mediated allylation (Barbier reaction)
A mixture of D-glucosamine or N-protected D-glucosamine (1.16 mmol) and In° powder (4 equiv) was suspended in solvent (15 ml, freshly purified THF, 1,4-dioxane, H2O or mixtures thereof; see Tables 1–3) at rt. Allyl bromide (6 equiv) was added and the mixture was heated to reflux (100 °C) and allowed to react until no starting material was evident (TLC) or no change of product to starting material ratio could be detected (1H NMR, internal calibration with added caffeine) (See Tables 1–3). The heterogeneous mixture was cooled to room temperature, the insoluble solid was removed by centrifugation and the supernatant was neutralized (pH 7~8) by addition of saturated NaHCO3. Excess (Boc)2O was added, and the mixture subsequently stirred at room temperature for 2 hours, diluted with methanol and filtered with micro filter (0.45 μm). The filtrate was analyzed by HPLC (reversed phase C18, 22.5:77.5 CH3CN: H2O, ELSD detector).
Table 3.
Effect of added salt on Barbier reaction of D-glucosamine with In° and allyl bromide in aqueous 1,4-dioxane.
| Entry | Additive | Equiv. | threo:erythro | Yield |
|---|---|---|---|---|
| 1 | – | 5.0 | 7.5:1 | 96% |
| 2 | LiCl | 5.0 | 5.4:1 | 98% |
| 3 | LiBr | 5.0 | 5.7:1 | 95% |
| 4 | KCl | 5.0 | 4.5:1 | 98% |
| 5 | MgCl2 | 5.0 | 3.5:1 | 94% |
| 6 | (n-Bu)4NCl | 5.0 | 5.1:1 | 90% |
| 7 | (n-Bu)4NI | 5.0 | 4.7:1 | 98% |
| 8 | NaCl | satd. | 3.2:1 | 80% |
| 9 | NH4Cl | satd. | 2.0:1 | 90% |
| 10 | LiClO4 | 5.0 | 2.8:1 | 84% |
Conditions: Solvent ratio, 2:1 dioxane:H2O, 100 °C. PG = H. For other conditions, see reaction equation and footnote in Table 1.
Benzyl (4R,5R)-4-allyl-2,2-dimethyl-1,3-dioxan-5-yl-carbamate (5a and 5b)
D-Glucosamine (3.00 g, 13.9 mmol) was suspended in 1,4-dioxane (135 mL) and distilled water (45 mL). Allyl bromide (4.8 mL, 56 mmol) and In° powder (3.2 g, 28 mmol) were added, and the mixture was heated at reflux for 20 h. The reaction mixture was cooled to 10 °C and neutralized to pH 7~8 with 1M NaOH solution prior to addition of NaHCO3 (1.7 g, 21 mmol) and benzyl chloroformate (3 mL, 20.8 mmol) with continued stirring at room temperature for 24 h. After recooling to 5 °C, sodium periodate (8.9 g, 41.7 mmol) was slowly portionwise and the mixture stirred vigorously for 3 h at room temperature before removal of volatiles was removed under reduced pressure. The residue was suspended in methanol (200 mL) and insoluble material was removed by filtration. The filtrate was cooled to 5 °C and sodium borohydride (1.6 g, 41.7 mmol) was slowly added, followed by stirring for 3 h before quenching by addition of water (50 mL). Volatiles were removed under reduced pressure and the mixture was diluted with brine (200 mL) and extracted with ethyl acetate (200 mL × 2). The combined organic extracts were dried with MgSO4 and concentrated under reduced pressure. The oily residue was dissolved in acetone (50 mL) and treated with excess 2,2-dimethoxypropane (24 mL) and a catalytic amount of camphorsulfonic acid (60 mg), then stirred at room temperature for 5 h. After confirming the completion of reaction by TLC, the reaction was quenched with triethylamine (9 mL) and the mixture concentrated under reduced pressure. Purification of the residue by flash chromatography (silica, 10% Et2O in hexanes) gave the two diastereomers (4R,5R)-5a and (4S,5R)-5b (total 1.9 g, 45 %, dr = 7:1).
(4R,5R)-5a: FTIR (ATR, neat) ν 1715, 1504, 1214, 1085 cm−1; [α]D −23 (c 0.083, CHCl3); 1H NMR (500 MHz, CDCl3) δ 7.30–7.41 (m, 5H), 5.74–5.83 (m, 1H), 5.57 (dd, J = 9.7 Hz, 1H), 5.05–5.15 (m, 4H), 4.06 (dd, J = 12.0, 1.7 Hz, 1H), 3.98 (dt, J = 6.9, 1.7 Hz, 1H), 3.77 (dd, J= 12.0, 1.7 Hz, 1H), 3.61 (m, 1H), 2.21 (m, 2H), 1.46 (s, 3H), 1.39 (s, 3H); 13C NMR (100 MHz, CDCl3) δ 156.2 (Cq), 136.5 (Cq), 133.4 (CH), 128.6 (CH), 128.2 (CH), 128.1 (CH), 117.8 (CH2), 99.2 (Cq), 72.0 (CH), 66.9 (CH2), 65.2 (CH2), 47.2 (CH), 36.3 (CH2), 29.7 (CH3), 18.6 (CH3); HR-ESI-FT-MS m/z [M+Na]+ 328.1516 calcd for C17H23NO4Na 328.1519.
(4S,5R)-5b: FTIR (ATR, neat) ν 1691, 1536, 1225, 1023 cm−1; [α]D −21 (c 0.076, CHCl3); 1H NMR (500 MHz, CDCl3) δ 7.30–7.38 (m, 5H), 5.77–5.88 (m, 1H), 5.03–5.13 (m, 4H), 4.66 (br, 1H), 3.91–3.94 (m, 1H), 3.55–3.67 (m, 3H), 2.38–2.42 (m, 1H), 2.25–2.29 (m, 1H), 1.42 (s, 3H), 1.39 (s, 3H); 13C NMR (100 MHz, CDCl3) δ 155.8 (Cq), 136.3 (Cq), 133.1 (CH), 128.6 (CH), 128.3 (CH), 128.2 (CH), 117.1 (CH2), 98.9 (Cq), 72.2 (CH), 67.0 (CH2), 63.1 (CH2), 49.6 (CH), 37.1 (CH2), 28.1 (CH3), 19.9 (CH3); HR-ESI-FT-MS m/z [M+Na]+ 328.1517 calcd for C17H23NO4Na 328.1519.
tert-Butyl (5R)-4-allyl-2-phenyl-1,3-dioxan-5-ylcarbamate (6a, 6b)
D-glucosamine (3g, 13.9 mmol) was suspended in 1,4-dioxane (135 mL) and distilled water (45 mL). Allyl bromide (4.8 mL, 56 mmol) and In° powder (3.2 g, 28 mmol) were added and the mixture heated at reflux for 20 h. The reaction solution was cool to 10 °C and adjusted to pH 7~8 with 1M NaOH solution. NaHCO3 (1.7 g, 20.8 mmol) and di-tert-butyl bicarbonate (4.5 g, 21 mmol) were added to neutralized solution of allylated D-glucosamine at 5 °C. The solution was stirred at room temperature for 24 h then cooled to 5 °C prior to slow, portion-wise addition of sodium periodate (8.9 g, 42 mmol). The mixture was stirred vigorously for 3 h at room temperature and, after completion of reaction, the volatiles were removed under reduced pressure, the residue resuspended in methanol (200 mL) and the insoluble solid removed by filtration. The filtrate was cool to 5 °C and sodium borohydride (1.6 g, 42 mmol) was added slowly, and the solution stirred for 3 h. After quenching the mixture by addition of H2O (50 mL), the volatiles were removed under reduced pressure. Brine (200 mL) was added to the mixture followed by extraction with EtOAc (200 mL × 2). The combined organic extracts were dried with MgSO4 and concentrated under reduced pressure, and the oily residue dissolved in dry CH2Cl2 (50 mL). Benzaldehyde dimethyl acetal (2.7 mL, 19 mmol) and a catalytic amount of camphorsulfonic acid (10 mg) were added to the solution, and the mixture stirred at room temperature for 5 h. After the completion of the reaction (TLC), the reaction mixture was quenched by addition of triethylamine (4 mL) and concentrated under reduced pressure. The residue was purified by flash chromatography (silica, elution with 10% ether in hexanes) gave the pure compounds (4R,5R)-6a and (4S,5R)-6b (total 1.5 g, 35 %, 5 steps, dr = 7:1).
(4R, 5R)-6a
FTIR (ATR, neat) ν 1711, 1499, 1365, 1168 cm−1; [α]D +3.2 (c 0.11, CHCl3); 1H NMR (500 MHz, CDCl3) δ 7.45–7.52 (m, 2H), 7.32–7.42 (m, 3H), 5.88 (m, 1H), 5.57 (s, 1H), 5.38 (d, J = 10.3 Hz, 1H), 5.10 – 5.18 (m, 2H), 4.17 (dd, J = 11.5, 1.7 Hz, 1H), 4.06 (dd, J = 11.5, 1.7 Hz, 1H), 3.98 (m, 1H), 3.70 (m, 1H), 2.41 (m, 1H), 2.32 (m, 1H), 1.46(s, 9H); 13C NMR (100 MHz, CDCl3) δ 155.8 (Cq), 138.1 (Cq), 133.4 (CH), 129.1 (CH), 128.4 (CH), 126.0 (CH), 118.1 (CH2), 101.6 (CH), 79.7 (Cq), 79.5 (CH), 72.2 (CH2), 46.9 (CH), 36.3 (CH2), 28.5 (CH3) HR-ESI-FT-MS m/z [M+Na]+ 342.1674 calcd for C18H25NO4Na 342.1681
(4S, 5R)-6b
[α]D −22.3 (c 0.16, CHCl3); 1H NMR (500 MHz, CDCl3) δ 7.45–7.52 (m, 2H), 7.30–7.40 (m, 3H), 5.95 (m, 1H), 5.43 (s, 1H), 5.10 – 5.17 (m, 2H), 4.29 (dd, J = 10.8, 4.3 Hz, 1H), 4.27 (br, 1H), 3.75 (m, 1H), 3.59 (m, 1H), 3.50 (dd, J = 10.8, 10.8 Hz, 1H), 2.53 (m, 1H), 2.42 (m, 1H), 1.47(s, 9H); 13C NMR (100 MHz, CDCl3) δ 155.1 (Cq), 137.9 (Cq), 134.1 (CH), 129.0 (CH), 128.4 (CH), 126.2 (CH), 117.5 (CH2), 101.1 (CH), 80.6 (CH), 80.1 (Cq), 70.0 (CH2), 47.4 (CH), 36.7 (CH2), 28.5 (CH3); HR-ESI-FT-MS m/z [M+Na]+ 342.1674 calcd for C18H25NO4Na 342.1681
Benzyl (4R,5R)-4-((E)-15-hydroxypentadec-2-enyl)-2,2-dimethyl-1,3-dioxan-5-ylcarbamate (7)
To a solution of 5a (709 mg, 2.32 mmol) in dry CH2Cl2 (20 mL) was added tetradec-13-enyl acetate (3.6 g, 14 mmol) and Grubbs 2nd generation catalyst (90 mg, 0.10 mmol)30 under N2 at room temperature. After reaction mixture was stirred for 2h under reflux, solvent was removed in vacuo to give a dark-brown oil. To the stirred solution of dark brown oil in MeOH (20 mL) at room temperature was added 1M CH3ONa in methanol (3.5 mL, 3.5 mmol) and after 2h, methanol was removed under reduced pressure. Water (20 mL) was added and the reaction mixture was extracted with ethyl acetate (30 mL × 2) and combined organic extracts were dried with MgSO4 and concentrated under reduced pressure. Flash chromatography of the residue (silica gel, 15% EtOAc-hexane) gave alcohol 7 (580 mg, 51% for 2 steps) as a colorless oil (E/Z = 9.6:1).
FTIR (ATR, neat) ν 1715, 1506, 1215, 1083 cm−1; E-isomer: 1H NMR (400 MHz, CDCl3) δ 7.28 – 7.40 (m, 5H), 5.55 (d, J = 9.9 Hz, 1H), 5.47 (dt, J = 15.4, 6.6 Hz, 1H), 5.34 (dt, J = 15.4, 6.9 Hz, 1H), 5.11 (m, 2H), 4. 03 (dd, J = 11.7, 1.5 Hz, 1H), 3.90 (td, J = 6.9, 1.5 Hz, 1H), 3.72 (dd, J = 12.1, 1.5 Hz, 1H), 3.63 (t, J = 6.6 Hz, 2H), 3.58 (m, 1H), 2.13 (m, 2H), 1.96 (m, 2H), 1.72 (brs, 1H), 1.55 (m, 2H), 1.45 (s, 3H), 1.38 (s, 3H), 1.20 – 1.36 (m, 18H); 13C NMR (100 MHz, CDCl3) δ 156.2 (Cq), 136.6 (Cq), 134.4 (CH), 128.7 (CH), 128.3 (CH), 128.2 (CH), 124.2 (CH), 99.3 (Cq), 71.7 (CH), 66.9 (CH2), 65.3 (CH2), 63.2 (CH2), 47.1 (CH), 35.2 (CH2), 33.0 (CH2), 32.8 (CH2), 29.8 (CH3), 29.75 (CH2), 29.73 (CH2), 29.70 (CH2), 29.6 (CH2), 29.56 (CH2), 29.52 (CH2), 29.3 (CH2), 25.9 (CH2), 18.7 (CH3); HR-ESI-FT-MS m/z [M+Na]+ 512.3344 calcd for C29H47NO5Na 512.3351
Benzyl (4R,5R)-2,2-dimethyl-4-((E)-15-oxopentadec-2-enyl)-1,3-dioxan-5-ylcarbamate (8)
Dess-Martin periodinane (390 mg, 0.92 mmol) was added portionwise to a stirred, cooled (5 °C) solution of compound 7 (300 mg, 0.61 mmol) in dry CH2Cl2 (10 mL) and, after 2h at 0 °C, the reaction was quenched by the addition of satd. aqueous NaHCO3 (10 mL). The reaction mixture was extracted with CH2Cl2 (15 mL × 2) and the combined organic extracts were dried with MgSO4 and concentrated under reduced pressure. Flash chromatography of the residue (silic, 12% EtOAc-hexane) gave aldehyde 8 (238 mg, 80 %) as colorless oil (E/Z = 9.6:1).
FTIR (ATR, neat) ν 1724, 1505, 1214, 1085 cm−1; 1H NMR (400 MHz, CDCl3) E-isomer: δ 9.75 (t, J = 1.8 Hz, 1H), 7.29 – 7.39 (m, 5H), 5.54 (d, J = 9.9 Hz, 1H), 5.45 (dt, J = 15.5, 6.9 Hz, 1H), 5.36 (dt, J = 15.5, 6.9 Hz, 1H), 5.10 (m, 2H), 4.03 (dd, J = 12.0, 1.7 Hz, 1H), 3.90 (td, J = 6.9, 1.7 Hz, 1H), 3.77 (dd, J = 12.0, 1.7 Hz, 1H), 3.59 (m, 1H), 2.40 (dt, J = 7.5, 1.7 Hz, 2H), 2.14 (dd, J = 6.9, 6.9 Hz, 2H), 1.96 (m, 2H), 1.60 (m, 2H), 1.44 (s, 3H), 1.37 (s, 3H), 1.23 – 1.37 (m, 16H). 13C NMR (100 MHz, CDCl3) δ 203.1 (CH), 156.2 (Cq), 136.6 (Cq), 134.4 (CH), 128.7 (CH), 128.3 (CH), 128.2 (CH), 124.2 (CH), 99.3 (Cq), 71.7 (CH), 66.9 (CH2), 65.3 (CH2), 47.1 (CH), 44.1 (CH2), 35.2 (CH2), 32.8 (CH2), 29.8 (CH3), 29.75 (CH2), 29.73 (CH2), 29.6 (CH2), 29.57 (CH2), 29.55 (CH2), 29.51 (CH2), 29.3 (CH2), 22.2 (CH2), 18.7 (CH3); HR-ESI-FT-MS m/z [M+Na]+ 510.3191 calcd for C29H45NO5Na 510.3190
Benzyl (4R,5R)-4-((E)-16-(diethoxyphosphoryl)-15-oxohexadec-2-enyl)-2,2-dimethyl-1,3-dioxan-5-ylcarbamate (9)
To a cooled solution of diethyl methylphosphonate (242 mg, 1.54 mmol) in THF (10 mL) was added n-butyllithium (2.21 M in hexane, 698 μL, 1.54 mmol) over 10 min at −78 °C followed, after 15 min, by a solution of aldehyde 8 (251 mg, 0.51 mmol) in THF (10 mL). After 60 min at −78 °C, saturated aqueous NH4Cl was added, and mixture was extracted with EtOAc (x3). The combined organic layers were washed with brine, dried over MgSO4 and concentrated under reduced pressure. Flash chromatography of the residue (silica, 35% EtOAc-hexane) gave the secondary alcohol (262 mg) as colorless oil and starting material (38 mg, 15 %). The secondary alcohol (262 mg, 0.41 mmol) was dissolved in dry CH2Cl2 (15 mL), cooled to 0 °C and treated portionwise with Dess-Martin periodinane (261 mg, 0.62 mmol) followed by stirring for 2h at 0 °C. The reaction was quenched by the addition of sat. NaHCO3 solution (10 mL), the mixture extracted with CH2Cl2 (15 mL × 2) and the combined organic extracts were dried with MgSO4 and concentrated under reduced pressure. Flash chromatography of the residue (silica gel, 50% EtOAc-hexane) gave phosphonate 9 (210 mg, 64% for 2 steps) as colorless oil (E/Z = 9.6:1).
FTIR (ATR, neat) ν 1714, 1505, 1242, 1023, 970 cm−1; E-isomer 1H NMR (500 MHz, CDCl3) δ 7.29 – 7.40 (m, 5H), 5.52 (d, J = 9.7 Hz, 1H), 5.45 (dt, J = 14.9, 6.9 Hz, 1H), 5.35 (dt, J = 14.9, 6.9 Hz, 1H), 5.11 (m, 2H), 4.14 (m, 4H), 4.04 (dd, J = 12.0, 1.7 Hz, 1H), 3.90 (td, J = 6.9, 1.7 Hz, 1H), 3.77 (dd, J = 12.0. 1.7 Hz, 1H), 3.59 (m, 1H), 3.06 (d, J = 22.9 Hz, 2H), 2.60 (t, J = 7.5 Hz, 2H), 2.13 (m, 2H), 1.96 (m, 2H), 1.56 (m, 2H), 1.44(s, 3H), 1.38 (s, 3H), 1.33 (t, J = 6.9 Hz, 6H), 1.21 – 1.30 (m, 16H); 13C NMR (100 MHz, CDCl3) δ 202.3 (d, JCP = 6.1 Hz, Cq), 156.2 (Cq), 136.5 (Cq), 134.3 (CH), 128.6 (CH), 128.2 (CH), 128.1 (CH), 124.1 (CH), 99.1 (Cq), 71.6 (CH), 66.8 (CH2), 65.2 (CH2), 62.5 (d, JCP = 6.1 Hz, CH2), 47.0 (CH), 44.1 (CH2), 41.7 (d, JCP = 127.4 Hz, CH2), 35.1 (CH2), 32.7 (CH2), 29.7 (CH3), 29.64 (CH2), 29.60 (CH2), 29.52 (CH2), 29.50 (CH2), 29.4 (CH2), 29.2 (CH2), 29.0 (CH2), 23.5 (CH2), 18.6 (CH3), 16.3 (d, JCP = 6.1 Hz, CH3); HR-ESI-FTMS m/z [M+H]+ 638.3815 calcd for C34H57NO8P 638.3816
tert-Butyl (2R,3R)-3-(benzyloxy)-1-hydroxyhex-5-en-2-ylcarbamate (10)
(alane method)
To a cool suspension of LiAlH4 (90 mg, 2.3 mmol) and 6a (163 mg, 0.51 mmol) in CH2Cl2-diethyl ether (1:1, 5 mL) at 0 °C was added, dropwise, an ethereal solution of AlCl3 (182 μL, 4.1 M diethyl ether solution, 0.76 mmol) and the mixture stirred at 25 °C for 2 h before quenching at 0 °C by dropwise addition of EtOAc (2 mL), followed by H2O (10 mL). The resulting mixture was extracted with EtOAc (10 mL × 3) and the combined organic extracts were washed with brine (5 mL), dried with MgSO4 and concentrated under reduced pressure. Flash chromatography of the residue (silica, 17% EtOAc-hexane) gave the alcohol 10 (160 mg, 98 %) as a colorless oil.
(DIBAL-H method)
To a cooled solution of 6a (92 mg, 0.29 mmol) in dry CH2Cl2 (3 mL) was added DIBAL-H (575 μL, 1.5 M toluene solution, 0.86 mmol) at 0 °C and the reaction mixture was stirred for 2 h. A solution of Rochelle’s salt (3 mL, satd) was added and the mixture was stirred for 1 h then extracted with CH2Cl2 (5 mL × 3). The combined organic extracts were washed with brine (5 mL), dried with MgSO4 and concentrated under reduced pressure. Purification, as described above, gave 10 (62 mg, 67 %) as a colorless oil.
FTIR (ATR, neat) ν 3441, 1692, 1496, 1164 cm−1; [α]D −4.1 (c 0.066, CHCl3); 1H NMR (500 MHz, CDCl3) δ 7.29 – 7.39 (m, 5H), 5.82 (m, 1H), 5.09–5.17 (m, 2H), 5.03 (d, J = 8.6 Hz, 1H), 4.67 (d, J = 11.5 Hz, 1H), 4.45 (d, J = 11.5 Hz, 1H), 3.76 (m, 1H), 3.70 (m, 2H), 3.62 (m, 1H), 2.46 (m, 1H), 2.35 (m, 1H), 1.67 (s, 9H); 13C NMR (100 MHz, CDCl3) δ 156.5 (Cq), 138.0 (Cq), 134.0 (CH), 128.6 (CH), 128.1 (CH), 128.0 (CH), 118.2 (CH2), 79.7 (Cq), 78.1 (CH), 72.4 (CH2), 64.0 (CH2), 54.0 (CH), 35.6 (CH2), 28.5 (CH3).
tert-Butyl (2S,3R)-3-(benzyloxy)-1-(phenylthio)hex-5-en-2-ylcarbamate (11)
Compound 10 (406 mg, 1.26 mmol) in THF (10 mL) was added to a solution of tri-n-butylphosphine (786 μL, 3.16 mmol) and phenyl disulfide (190 mg, 3.16 mmol) in THF (10 mL) at 0 °C. After stirring at room temperature for 18h, the solvent was removed under reduced pressure to give the crude product which was purified by flash chromatography (silica gel, 5% EtOAc-hexane) to provide phenylthioether 11 (462 mg, 88%) as a colorless oil.
FTIR (ATR, neat) ν 1712, 1494, 1166 cm−1; [α]D −3.5 (c 0.14, CHCl3); 1H NMR (500 MHz, CDCl3) δ 7.23–7.42 (m, 9H), 7.13–7.21 (m, 1H), 5.76 (m, 1H), 5.02–5.15 (m, 2H), 4.96 (d, J = 9.2 Hz, 1H), 4.64 (d, J = 11.5 Hz, 1H), 4.37 (d, J = 11.5 Hz, 1H), 3.87 (m, 2H), 3.16 (dd, J = 13.8, 5.7 Hz, 1H), 2.99 (dd, J = 13.2, 9.2 Hz, 1H), 2.46 (m, 1H), 2.28 (m, 1H), 1.45 (s, 9H); 13C NMR (100 MHz, CDCl3) δ 155.5 (Cq), 138.2 (Cq), 136.1 (Cq), 134.0 (CH), 129.3 (CH), 129.1 (CH), 128.5 (CH), 128.1 (CH), 128.0 (CH), 126.2 (CH), 118.1 (CH2), 79.5 (Cq), 77.5 (CH), 72.5 (CH2), 52.1 (CH), 35.8 (CH2), 35.7 (CH2), 28.5 (CH3); HR-ESI-FT-MS m/z [M+Na]+ 436.1919 calcd for C24H31NO3SNa 436.1917
tert-Butyl (2S,3R,E)-3-(benzyloxy)-9-hydroxy-1-(phenylthio)non-5-en-2-ylcarbamate (12)
Grubbs 2nd Generation catalyst (45 mg, 0.05 mmol) was added to a solution of compound 11 (437 mg, 1.06 mmol) and 4-penten-1-yl acetate (1.50 mL, 10.6 mmol) in dry CH2Cl2 (20 mL) under N2 at room temperature, and the mixture stirred for 4h under reflux. Removal of the volatiles under reduced pressure gave a dark brown oil which was taken up in MeOH (20 mL) was treated wtih 1M CH3O−Na+ in methanol (12.7 mL, 12.7 mmol). After stirring the reaction mixture for 2h at room temperature, methanol was removed under reduced pressure and the residue purified by flash chromatography (silica gel, 20% EtOAc-hexane) to afford compound 12 as colorless oil (E:Z = 7:1) (423 mg, 85 % for 2 steps).
FTIR (ATR, neat) ν 3443, 1695, 1494, 1162 cm−1; [α]D −3.1 (c 0.093, CHCl3); E-isomer 1H NMR (500 MHz, CDCl3) δ 7.25–7.41 (m, 9H), 7.13–7.91 (m, 1H), 5.40 (dt, J = 14.9, 6.9 Hz, 1H), 5.23 (dt, J = 14.9, 7.5 Hz, 1H), 4.99 (d, J = 9.2 Hz, 1H), 4.63 (d, J = 11.5 Hz, 1H), 4.36 (d, J = 11.5 Hz, 1H), 3.85 (m, 2H), 3.47 (t, J = 6.3 Hz, 2H), 3.07 (dd, J = 13.2, 5.2 Hz, 1H), 2.88 (dd, J = 13.2, 9.2 Hz, 1H), 2.33 (m, 1H), 2.09 (m, 1H), 1.93 (m, 2H), 1.70 (br, 1H), 1.46 (m, 2H), 1.36(s, 9H); 13C NMR (100 MHz, CDCl3) δ 155.6 (Cq), 138.2 (Cq), 136.1 (Cq), 133.7 (CH), 129.1 (CH), 129.0 (CH), 128.6 (CH), 128.1 (CH), 127.9 (CH), 126.1 (CH), 125.6 (CH), 79.5 (Cq), 77.6 (CH), 72.3 (CH2), 62.3 (CH2), 52.5 (CH), 35.5 (CH2), 34.1 (CH2), 32.1 (CH2), 28.9 (CH2), 28.5 (CH3); HR-ESI-FT-MS m/z [M+Na]+ 494.2337 calcd for C27H37NO4SNa 494.2336
tert-Butyl (2R,3R,E)-3-(benzyloxy)-9-hydroxynon-5-en-2-ylcarbamate (13)
To a solution of compound 12 (200 mg, 0.42 mmol) in methanol (3 mL) was added an excess of Raney 2800 nickel (washed with methanol three times just prior to use). The reaction mixture was stirred vigorously at room temperature for 2h at which point TLC analysis indicated completion of the reaction. The mixture was filtered through Celite and the filtrate concentrated under reduced pressure to a residue that was purified by flash chromatography (silica, 20% EtOAc-hexane) to provide primary alcohol 13 as a colorless oil (135 mg, 88%, E/Z = 7:1).
FTIR (ATR, neat) ν 3444, 1713, 1519, 1206, 1059 cm−1; E-isomer 1H NMR (500 MHz, CDCl3) δ 7.28–7.38 (m, 5H), 5.53 (dt, J = 15.3, 6.6 Hz, 1H), 5.44 (dt, J = 15.5, 6.8 Hz, 1H), 4.79 (br, 1H), 4.64 (d, J = 11.5 Hz, 1H), 4.49 (d, J = 11.5 Hz, 1H), 3.83 (m, 1H), 3.64 (t, J = 6.4 Hz, 2H), 3.32 (m, 1H), 2.34 (m, 1H), 2.21 (m, 1H), 2.10 (m, 2H), 1.81 (br, 1H), 1.64 (m, 2H), 1.44 (s, 9H), 1.16 (d, J = 6.6 Hz, 3H) 13C NMR (125 MHz, CDCl3) δ 155.6 (Cq), 138.4 (Cq), 133.1 (CH), 128.3 (CH), 127.8 (CH), 127.7 (CH), 126.2 (CH), 81.7 (CH), 78.9 (Cq), 72.4 (CH2), 62.3 (CH2), 47.8 (CH), 34.2 (CH2), 32.2 (CH2), 28.9 (CH2), 28.4 (CH3), 18.6 (CH3); HR-FAB-MS m/z [M+H]+ 364.2491 calcd for C21H34NO4 364.2488
tert-Butyl-(2R,3R,E)-3-(benzyloxy)-9-oxonon-5-en-2-ylcarbamate (14)
To a cool solution of compound 13 (103 mg, 0.283 mmol) in dry CH2Cl2 (mL) was added Dess-Martin periodinane (178 mg, 0.420 mmol) at 0 °C and the reaction mixture was stirred for 2h at 0 °C. Saturated aqueous NaHCO3 (5 mL) was added to reaction mixture and the reaction mixture was extracted with CH2Cl2 (5 mL × 2) and combined organic extracts were dried with MgSO4 and concentrated under reduced pressure. Purification of the residue by flash chromatography (silica gel, 35 % EtOAc-hexanes) gave the aldehyde 14 as a colorless oil (87 mg, 85%, E/Z =7:1).
FTIR (ATR, neat) ν 1713, 1505, 1169, 1060 cm−1; E-isomer 1H NMR (700 MHz, CDCl3) δ 9.76 (s, 1H), 7.28–7.38 (m, 5H), 5.49 (m, 2H), 4.76 (br, 1H), 4.62 (d, J = 11.4 Hz, 1H), 4.49 (d, J = 11.4 Hz, 1H), 3.81 (m, 1H), 3.31 (m, 1H), 2.50 (t, J = 7.0 Hz, 2H), 2.34 (m, 3H), 2.19 (m, 1H), 1.44 (s, 9H), 1.16 (d, J = 6.6 Hz, 3H); 13C NMR (175 MHz, CDCl3) δ 202.2 (CH), 155.5 (Cq), 138.3 (Cq), 131.1 (CH), 128.3 (CH), 127.8 (CH), 127.7 (CH), 127.1 (CH), 81.5 (CH), 78.9 (Cq), 72.4(CH2), 47.8 (CH), 43.2 (CH2), 34.2 (CH2), 28.4 (CH3), 25.1 (CH2), 18.6 (CH3); HR-FAB-MS m/z [M+H]+ 362.2337 calcd for C21H32NO4 362.2331
Compound 15
Ba(OH)2 monohydrate (20 mg, 0.11 mmol; activated by heating under low pressure, 0.5 mm Hg) was added to a solution of phosphonate 9 (85 mg, 0.13 mmol) in THF (2 mL) with stirring. After 30 min, aldehyde 14 (48 mg, 0.13 mmol) in wet THF (4 mL, THF-H2O 40:1) was added and the mixture stirred at room temperature for an additional 2 h. The mixture was diluted with H2O, and the aqueous mixture was extracted with CH2Cl2 (x3). The combined organic extracts were dried with MgSO4, concentrated, and the residue purified by flash chromatography (silica, 35 % EtOAc-hexane) to provide enone 15 as a colorless oil (mixture of E/Z isomers, 99 mg, 91%); FTIR (ATR, neat) ν 1714, 1505, 1169, 1085 cm−1; E/Z-isomers 1H NMR (700 MHz, CDCl3) δ 7.24 – 7.42 (m, 10H), 6.81 (dt, J = 15.8, 6.6 Hz, 1H), 6.09 (d, J = 15.8 Hz, 1H), 5.53 (d, J = 9.7 Hz, 1H), 5.50 (m, 1H), 5.46 (m, 2H), 5.35 (dt, J = 15.4, 6.6 Hz, 1H), 5.12(m, 2H), 4.77 (d, J = 7.9 Hz, 1H), 4.62 (d, J = 11.4 Hz, 1H), 4.47 (d, J = 11.4 Hz, 1H), 4.02 (d, J = 11.9 Hz, 1H), 3.91 (m, 1H), 3.82 (m, 1H), 3.76 (d, J = 11.9 Hz, 1H), 3.59 (m, 1H), 3.30 (m, 1H), 2.51 (t, J = 7.0 Hz, 2H), 2.33 (m, 1H), 2.27 (m, 2H), 2.20 (m, 1H), 2.18 (m, 2H), 2.14 (m, 2H), 1.97 (m, 2H), 1.58 (m, 2H), 1.45 (s, 3H), 1.42 (s, 9H), 1.38 (s, 3H), 1.21–1.35 (m, 16H), 1.16 (d, J = 6.6 Hz, 3H) 13C NMR (175 MHz, CDCl3) δ 200.8 (Cq), 155.9 (Cq), 155.4 (Cq), 146.3 (CH), 138.2 (Cq), 136.3 (Cq), 134.2 (CH), 131.8 (CH), 130.5 (CH), 128.4 (CH), 128.3 (CH), 128.1 (CH), 128.0 (CH), 127.7 (CH), 127.6 (CH), 126.9 (CH), 123.9 (CH), 99.0 (Cq), 81.6 (CH), 78.8 (Cq), 72.3 (CH2), 71.5 (CH), 66.7 (CH2), 65.1 (CH2), 47.7 (CH), 46.8 (CH), 39.9 (CH2), 34.9 (CH2), 34.1 (CH2), 32.5 (CH2), 32.1 (CH2), 31.0 (CH2), 29.5 (CH3), 29.4 (CH2), 29.3 (CH2), 29.2 (CH2), 29.1 (CH2), 29.0 (CH2), 24.2 (CH2), 18.5 (CH3), 18.4 (CH3). HR-FAB-MS m/z [M+H]+ 845.5685 calcd for C51H76N2O8 845.5680
Rhizochalinin C (1a)
A solution of compound 15 (30 mg, 0.035 mmol) in methanol (5 mL) was treated with 10M HCl (1 mL) and a catalytic amount of Pd-C (10% w/w) and the reaction mixture was shaken under an atmosphere of H2 (2 atm) for 10 h. The catalyst was removed by filteration and the filtrate concentrated under reduced pressure. Purification of the residue by flash chromatography (silica, 9:4:1 CHCl3-MeOH-NH4OH) gave rhizochalinin C (1a) (14.8 mg, 87 %) as white solid, identical to 1a derived from natural rhizochalin C (1b).3f
1H NMR (500 MHz, CD3OD) δ 3.78 (1H, dd, J = 11.7, 4.1 Hz, 1-H), 3.68 (1H, m, 3-H), 3.66 (1H, dd, J = 11.7, 6.9 Hz, 1-H), 3.46 (1H, m, 26-H), 3.10 (1H, m, 27-H), 3.06 (1H, m, 2-H), 2.454 (2H, t, J = 7.3 Hz, 17-H), 2.447 (2H, t, J = 7.3 Hz, 19-H), 1.49–1.61 (m, 8H), 1.29–1.47 (m, 30H), 1.27 (3H, d, J = 6.6 Hz, 28-H) 13C NMR (125 MHz, CD3OD) δ 214.4(Cq, C-19), 73.1 (CH, C-26), 69.1 (CH, C-3), 60.5 (CH, C-2), 59.1 (CH2, C-1), 53.5 (CH, C-27), 43.5 (CH2, C-17), 43.4(CH2, C-19), 34.9 (CH2), 34.6 (CH2), 30.76 (CH2), 30.72 (CH2), 30.71 (CH2), 30.6 (CH2), 30.5 (CH2), 30.46 (CH2), 30.43 (CH2), 30.3 (CH2), 30.2 (CH2), 26.3 (CH2), 26.2 (CH2), 24.9 (CH2), 24.8 (CH2), 16.0 (CH2, C-28); ESI HRMS m/z 509.4288 [M+Na]+ calcd for C28H58N2O4Na 509.4289.
Rhizochalinin C Perbenzoate (16)
Perbenzoate 16 was prepared from synthetic 1a using the previously reported procedure.3f The CD, 1H NMR and HMRS data for synthetic 16 were in excellent agreement with those reported for natural-product-derived 16.3f CD, See Figure 3. 1H NMR (500 MHz, CDCl3) δ 7.35–8.08 (m, 25H), 6.61 (d, J = 9.3 Hz, 1H), 6.36 (d, J = 9.0 Hz, 1H), 5.54 (dt, J = 8.0, 5.0 Hz, 1H), 5.21 (dt, J = 7.9, 5.1 Hz, 1H), 4.88 (m, 1H), 4.55(dd, J = 11.6, 5.9 Hz, 1H), 4.51 (m, 1H), 4.46 (dd, J = 11.6, 5.0 Hz, 1H), 2.36 (t, J = 7.3 Hz, 2H), 2.35 (t, J = 7.3 Hz, 2H), 1.15–1.96 (m, 38H), 1.28 (d, J = 6.7 Hz, 3H). ESI HRMS m/z 1029.5599 [M+Na]+ calcd for C63H78N2O9Na 1029.5600.
Supplementary Material
Acknowledgments
We thank Y. Su and Anthony Mrse (UCSD) for assistance with HRMS and NMR measurements, respectively, E. P. Stout for measurement of CD spectra and J. Olejniczak for preparation of N-phthalimido-D-glucosamine. The purchase of the Agilent TOF mass spectrometer and the 500 MHz NMR spectrometer were made possible with funds from the NIH Shared Instrument Grant program (S10RR025636) and the NSF Chemical Research Instrument Fund (CHE0741968), respectively. We are grateful for funding support of this work from NIH (AI039978, AI100776).
Footnotes
Supporting Information Available. 1H and 13C NMR NMR data for all compounds are available free of charge via Internet at http://pubs.acs.org.
References
- 1.Pruett ST, Bushnev A, Hagedorn K, Adiga M, Haynes CA, Sullards MC, Liotta DC, Merrill AH., Jr J Lipid Res. 2008;49:1621–39. doi: 10.1194/jlr.R800012-JLR200. [DOI] [PMC free article] [PubMed] [Google Scholar]
- 2.Carter GT, Rinehart KL. J Am Chem Soc. 1978;100:7441–2.Cuardos R, Montejo de Garcini E, Wandosell F, Faircloth G, Fernández-Sousa JM, Avila J. Cancer Lett. 2000;152:23–9. doi: 10.1016/s0304-3835(99)00428-0.Clark RJ, Garson MJ, Hooper JNA. J Nat Prod. 2001;64:1568–71. doi: 10.1021/np010246x.Jiménez C, Crews P. J Nat Prod. 1990:978–82. doi: 10.1021/np50070a033.Ichihashi M, Mori K. Bioci Biotechnol Biochem. 2003;67:329–33. doi: 10.1271/bbb.67.329.Garido L, Zubíaa E, Ortega MJ, Naranjo S, Salvá J. Tetrahedron. 2001;57:4579–88.Kossuga MH, MacMillan JB, Rogers EW, Molinski TF, Nascimento GGF, Rocha RM, Berlinck RGS. J Nat Prod. 2004;67:1879–81. doi: 10.1021/np049782q.Jares-Erijman EA, Bapat CP, Lithgow-Bertelloni A, Rinehart KL, Sakai R. J Org Chem. 1993;58:5732–7.For a review of bioactive aminoalcohols from marine organisms, see Molinski T. Curr Med Chem: Anti-Infect Agents. 2004;3:197–220.
- 3.(a) Makarieva TN, Denisenko VA, Stonik VA. Tetrahedron Lett. 1989;30:6581–4. [Google Scholar]; (b) Molinski TF, Makarieva TN, Stonik VA. Angew Chem Intl Ed. 2000;39:4076–9. [PubMed] [Google Scholar]; (c) Nicholas GM, Molinski TF. J Am Chem Soc. 2000;122:4011–9. [Google Scholar]; (d) Makarieva TN, Zakharenko AM, Dmitrenok PS, Guzii AG, Denisenko VA, Savina AS, Dalisay DS, Molinski TF, Stonik VA. Lipids. 2009;44:1155–62. doi: 10.1007/s11745-009-3360-0. [DOI] [PubMed] [Google Scholar]; (e) Makarieva TN, Guzii A, Denisenko VA, Dmitrenok PS, Santalova EA, Pokanevich EV, Molinski TF, Stonik VA. J Nat Prod. 2005;68:255–7. doi: 10.1021/np049710z. [DOI] [PubMed] [Google Scholar]; (f) Makarieva TN, Dmitrenok PS, Zakarenko AM, Denisenko VA, Guzzi AG, Li R, Skepper CK, Molinski TF, Stonik VA. J Nat Prod. 2007;70:1991–8. doi: 10.1021/np0704811. [DOI] [PubMed] [Google Scholar]; (G) Zhou BN, Mattern MP, Johnson RK, Kingston DGI. Tetrahedron. 2001;57:9549–54. [Google Scholar]
- 4.(a) Mansoor TA, Park T, Luo X, Hong J, Lee CO, Jung JH. Nat Prod Sci. 2007;13:247–50. [Google Scholar]; (b) Biegelmeyer R, Stout EP, Wang X. J Nat Prod. doi: 10.1021/np300744y. submitted. [DOI] [PMC free article] [PubMed] [Google Scholar]
- 5.Devijver C, Salmoun M, Daloze D, Braekman JC, De Weerdt WH, De Kluijver MJ, Gomez R. J Nat Prod. 2000;63:978–80. doi: 10.1021/np000081c. [DOI] [PubMed] [Google Scholar]
- 6.Gulavita NK, Scheuer PJ. J Org Chem. 1989;54:366–9.The original structures were mis-assigned as (2S,3R) and (2S,3S) but revised to (2R,3S) and (2R,3R) upon total synthesis Mori K, Matsuda H. Liebigs Ann Chem. 1992;2:131–7.
- 7.Nicholas GN, Li R, MacMillan JB, Molinski TF. Bioorg Med Chem Lett. 2002;12:2159–62. doi: 10.1016/s0960-894x(02)00367-0. [DOI] [PubMed] [Google Scholar]
- 8.Pyne S, Bittman R, Pyne NJ. Cancer Res. 2011;71:6576–82. doi: 10.1158/0008-5472.CAN-11-2364. [DOI] [PMC free article] [PubMed] [Google Scholar]
- 9.Kluepfel D, Bagli J, Baker H, Charest MP, Kudelski A, Sehgal SN, Vezina C. J Antibiot. 1972;25:109–15. doi: 10.7164/antibiotics.25.109. [DOI] [PubMed] [Google Scholar]
- 10.Strader CR, Pearce CJ, Oberlies NH. J Nat Prod. 2011;74:900–7. doi: 10.1021/np2000528. [DOI] [PubMed] [Google Scholar]
- 11.For recent reviews of syntheses of sphingosines and sphingolipids, see Howell AR, So RC, Richardson SK. Tetrahedron. 2004;60:11327–11347.Morales-Serna JA, Llaveria J, Diaz Y, Matheu MI, Castillon S. Curr Org Chem. 2010;14:2483–2521.Ballereau S, Baltas M, Genisson Y. Curr Org Chem. 2011;15:953–986.
- 12.Giannis A, Henk T. Tetrahedron Lett. 1990;31:1253–1256. [Google Scholar]
- 13.D-Serinal analogs could also be obtained from the more expensive D-mannosamine See Figure 1 and reference 12, footnote 12. Current prices from a leading chemical supplier based on the most economical size (US$/g): D-glucosamine•HCl (0.55), D-mannoseamine•HCl (205), D-serine (4.40)
- 14.Shen Z-L, Wang S-Y, Chok Y-K, Xu Y-H, Loh T-P. Chem Rev. 2012 doi: 10.1021/cr300051y. ASAP. and references cited within. [DOI] [PubMed] [Google Scholar]
- 15.(a) Choi SK, Lee S, Whitesides GM. J Org Chem. 1996;61:8739–45. doi: 10.1021/jo9614856. [DOI] [PubMed] [Google Scholar]; (b) Gao J, Haerter R, Gordon DM, Whitesides GM. J Org Chem. 1994;59:3714–3715. [Google Scholar]; (c) Kim E, Gordon DM, Schmid W, Whitesides GM. J Org Chem. 1993;58:5500–5507. [Google Scholar]; (d) Gordon DM, Whitesides GM. J Org Chem. 1993;58:7937–7938. [Google Scholar]
- 16.(a) Chan TH, Li CJ. J Chem Soc Chem Commun. 1992:747–8. [Google Scholar]; (b) Chan TH, Lee MC. J Org Biomol Chem. 1995;60:4228–4232. [Google Scholar]
- 17.Schmid W, Whitesides GM. J Am Chem Soc. 1991;113:6674–6675. [Google Scholar]
- 18.Gordon DM, Whitesides GM. J Org Chem. 1993;58:7937–8. [Google Scholar]
- 19.Paquette LA, Mitzel TM, Isaac MB, Crasto CF, Schomer WW. J Org Chem. 1997;62:4293–301. doi: 10.1021/jo970274d. [DOI] [PubMed] [Google Scholar]
- 20.Steurer S, Podlech J. Adv Synth Catal. 2001;343:251–4. [Google Scholar]
- 21.Garner P, Min J. Org Synth. 1992;70:18–20. [Google Scholar]
- 22.Paquette LA, Mitzel TM. J Am Chem Soc. 1996;118:1931–7. [Google Scholar]
- 23.Khalaf JK, Datta A. J Org Chem. 2004;69:387–90. doi: 10.1021/jo035441q. [DOI] [PubMed] [Google Scholar]
- 24.The threo:erythro ratio was determined after exhaustive conversion of the crude products to N-Boc derivatives ((Boc)2O) and HPLC integration of the resulting N-Boc-2-amino-1,3-hexenols (reversed phase, C18, 22.5:77.5 CH3CN:H2O, ELSD detection). Yields were determined by 1H NMR integration and normalization to caffeine, added as an internal standard.
- 25.For other syntheses of sphingosine and ceramides utilizing Grubbs olefin cross-metathesis, see Yamamoto T, Hasegawa H, Ishii S, Kaji S, Masuyama T, Harada S, Katsumura S. Tetrahedron. 2008;64:11647–60.Yamamoto T, Hasegawa H, Hakogi T, Katsumura S. Org Lett. 2006;8:5569–72. doi: 10.1021/ol062258l.Hasegawa H, Yamamoto T, Hatano S, Hakogi T, Katsumura S. Chem Lett. 2004;33:1592–3.Rai AN, Basu A. J Org Chem. 2005;70:8228–30. doi: 10.1021/jo051069y.Rai AN, Basu A. Org Lett. 2004;6:2861–63. doi: 10.1021/ol049183a.Torssell S, Somfai P. Org Biomol Chem. 2004;2:1643–46. doi: 10.1039/b403568b.
- 26.Heathcock CH, Hadley CR, Rosen T, Theisen PD, Hecker SJ. J Med Chem. 1987;30:1858–73. doi: 10.1021/jm00393a030. [DOI] [PubMed] [Google Scholar]
- 27.Finholt AE, Bond AC, Schlesinger HI. J Am Chem Soc. 1947;69:1199–1203. [Google Scholar]
- 28.Paterson I, Yeung KS, Smaill JB. Synlett. 1993:774–6. [Google Scholar]
- 29.Dalisay DS, Rogers EW, Edison A, Molinski TF. J Nat Prod. 2009;72:732–8. doi: 10.1021/np8007649. [DOI] [PMC free article] [PubMed] [Google Scholar]
- 30.Scholl M, Ding S, Lee CW, Grubbs RH. Org Lett. 1999;1:953–6. doi: 10.1021/ol990909q. [DOI] [PubMed] [Google Scholar]
Associated Data
This section collects any data citations, data availability statements, or supplementary materials included in this article.





