Abstract
Bottle gourd (Lagenaria siceraria) an important vegetable crop in India was observed to be affected by a chlorotic curly stunt disease (CCSD) during 2003–2006 in the vegetable growing areas of Delhi and adjoining state of Haryana. The affected plants are severely stunted and bear very small chlorotic and mildly curled leaves. Incidence of the disease varied from 4.7 to 36%. The disease could be easily transmitted by whitefly, Bemisia tabaci but not by sap. The causal virus was found to be a Begomovirus on the basis of whitefly transmission and sequence identity of putative coat protein (CP) and replication initiator protein (Rep) genes. The virus was transmitted to Cucumis sativus, Luffa acutangula, L. cylndrica, Lycopersicon esculentum, Nicotiana tabacum and Praecitrullus fistulosus but not to Citrullus lunatus, Cucumis melo, Cucurbita moschata and Vigna unguiculata. The N-terminal 60 amino acids of CP of the virus had 100% sequence identity with all the isolates of Tomato leaf curl New Delhi virus (ToLCNDV) and two isolates of Squash leaf curl China virus (SLCCV). The full length amino acid sequence of the CP and Rep genes had 100% similarity with ToLCNDV-Svr and -Luffa isolates. The phylogenetic analysis showed that the virus associated with CCSD of bottle gourd belongs to ToLCNDV cluster of the begomoviruses. This is the first record of emergence of a Begomovirus associated severe disease in bottle gourd in India.
Keywords: Bottle gourd, Chlorotic curly stunt, Begomovirus, Tomato leaf curl New Delhi virus
Introduction
Bottle gourd (Lagenaria siceraria), a popular cucurbitaceous vegetable is grown throughout India. In northern India, bottle gourd is cultivated during summer-rainy seasons under hot and humid conditions. Several viruses, like Cucumber mosaic virus [36] Cucumber green mottle mosaic virus [23] Papaya ring spot virus-W [19], Watermelon mosaic virus [1] and Zucchini yellow mosaic virus [38] are known to affect bottle gourd cultivation in India. During the last two decades, begomoviruses have emerged as a severe constraint in cultivation of cucurbits in India [35]. In the early sixties, yellow vein mosaic (YVM) disease of pumpkin (Cucurbita moschata) caused by a whitefly transmitted virus (apparently a begomovirus) was reported from central-western India. Since then, the diseases caused by begomoviruses have been reported in bitter gourd, chayote, cucumber, muskmelon, pumpkin and sponge gourd [17, 20, 22, 30, 34]. Many different begomoviruses infecting cucurbits have been reported from other countries such as Squash leaf curl Yunnan virus from China [39], Melon chlorotic leaf curl virus from Guatemala [3] Chayote yellow mosaic virus from Nigeria [33], ToLCNDV from Thailand [26, 27], Watermelon chlorotic curly stunt virus from Sudan and Iran [13], Squash leaf curl Philippines virus from the Philippines [14], Cucurbit leaf curl virus [2], Cucurbit leaf crumple virus [9], Squash leaf curl virus [8, 16] and Squash mild leaf curl virus [4] from USA, and Luffa yellow mosaic virus from Vietnam [24].
The genus Begomovirus, family Geminivirideae, consists of a group of viruses infecting dicot plants, which are exclusively transmitted by whitefly, Bemisia tabaci [15]. The begomoviruses have either monopartite genome having one circular ssDNA component of about 2.7 kb designated as DNA A, or bipartite genomes having two similar size components designated as DNA A and DNA B. The DNA A genome contains four major genes encoding coat protein (CP), replication initiator protein (Rep), transcriptional transactivator protein and replication enhancer protein [11, 31, 32]. The DNA B contains two genes encoding proteins required for movement of virus, host range and pathogenicity [10, 28]. The CP gene of begomoviruses is highly conserved and the N-terminal sequence identity of CP has been found useful in identifying begomovirus isolates [21, 26].
During 2003–2006, while conducting surveys of begomovirus diseases in cucurbits in the major cucurbit growing areas of Delhi and Haryana, bottle gourd was observed to be affected by begomovirus like disease. The affected plants exhibited symptoms like chlorotic mottling, mild curling and serious stunting and the disease was designated as chlorotic curly stunt of bottle gourd. In the present study, we describe a new disease of bottle gourd from northern India. Based on the biological and molecular studies, a Begomovirus under ToLCNDV evolutionary cluster was identified to be associated with the disease.
Materials and Methods
Disease Survey and the Virus Isolate
Surveys were conducted during the cropping seasons of 2003–2005 in the major cucurbit growing areas of Delhi and Haryana states. The disease incidence was estimated by recording symptomatic and non-symptomatic plants in one square meter area, at ten different randomly selected spots of each field.
The virus in this study was isolated from a young leaf of a severely infected bottle gourd plant collected from a commercial field in Gannore (Panipat District, Haryana State) and maintained in bottle gourd through whitefly inoculation at regular intervals. The isolate was designated as bottle gourd-Gannore-1 (BotGn-1).
Electron Microscopy and Dot Blot Hybridization
Leaf samples of bottle gourd plants collected from various fields were examined in an electron microscope (Jeol 100×) by leaf dip method to detect virus particles [6]. For dot blot, DNA isolated from 100 mg of leaf tissue of field samples was dotted on nylon membrane and the blots were hybridized with the radio-labeled probe to CP gene of ToLCNDV-[Luffa] [30].
Inoculations by Whitefly and Sap
The test cv. Pusa Naveen plants were raised in four-inch plastic pots containing soil mixture. Single plant per pot was grown from seeds under insect free conditions in a greenhouse. The test plants were inoculated at one to two true leaf stage.
Aviruliferous stock of whitefly was cultured and maintained on egg plant (Solanum melongena). Adult whiteflies were allowed acquisition access period (AAP) of 24 h on diseased leaf. After the AAP, 5–10 whiteflies were transferred to each test plant covered with small plastic cages (10.0 cm × 6.5 cm), and allowed for inoculation access period (IAP) of 24 h. After inoculation, whiteflies were killed by spraying plants with systemic insecticide, Karate (0.01%). The inoculated plants were grown under insect-proof conditions in the greenhouse. The observations were taken up to 30 days post inoculation (dpi).
For sap inoculation, the inoculum was prepared by extracting symptomatic leaves in 0.1 M sodium phosphate buffer, pH 7.0 having 0.01% beta mercapto-ethanol and 0.2% sodium sulphite. The extract was gently applied with cotton swab on fully expanded leaves and cotyledons of the healthy test plants predusted with Carborundum powder (600 mesh). The inoculated plants were observed for symptom development as described above.
Polymerase Chain Reaction (PCR)
PCR was conducted using the CP primers AVF30: 5′TTGGATCCATGGCGA AGCCGACCA3′, AVR31: 5′AAGAGCTCTTAATTTGTGACCGA3′ and Rep primer AVF66:5′AAGAGCTCATGGCTTCGCCACGTCGTTTT3′ and AVR67: 5′AAGGA TCCTCAACTCGCCTCCTGCGAAT3′ designed from the putative CP (AY309957) and Rep (AY557219) genes of ToLCNDV-Luffa. The PCR reaction mixture consisted of 2.5 unit of Taq DNA polymerase (MBI Fermentas, USA), 5 μl of 10× PCR buffer and 1 μl of 10 mM dNTPs, 1 μl (100 ng) each of forward and reverse primers and template DNA of about 200 ng. The total reaction volume was made up of 50 μl using autoclaved distilled water. PCR amplification conditions were: hot start at 94°C for 2 min then 35 cycles of denaturation at 90°C for 1 min, annealing at 40°C for 30 s and extension at 72°C for 1 min. At the end of 35 cycles, the final extension was at 72°C for 10 min. The PCR products were analyzed in 1% agarose gel stained with ethidium bromide (0.5 μg/ml) and results were recorded by a gel documentation system.
Cloning of Putative CP and Rep Genes, Sequencing and Sequence Analysis
The amplified fragments of CP and Rep genes of BotGn-1 were purified from gel using QIAquick Gel Extraction Kit (Qiagen, USA) and separately ligated in pDrive vector using PCR cloning kit (Qiagen, USA). The E. coli strain, DH5α was transformed [25] and the positive clones were identified by colony PCR using specific primers.
Two recombinant clones, one each for CP and Rep genes were sequenced from both the directions in an automated DNA sequencer (ABI Prism, Perkin Elmer, at University of Delhi, South Campus, New Delhi). The sequence data were assembled and analyzed using the software programme, BioEdit (version 5.0.9). The following sequences were obtained from GenBank database and used for comparisons: Chayote yellow mosaic virus (ChaYMV: AJ223191), Cucurbit leaf crumple virus-[California] (CuLCrV-[Cal]: AF224760), Cucurbit leaf crumple virus-[Arizona] (CuLCrV-[AZ]: AF256200), Cotton leaf curl Rajasthan virus (CLCuRV: AF363011), Luffa yellow mosaic virus (LYMV: AF509739), Melon chlorotic leaf curl virus-[Costa Rica] (MCLCuV-[CR]: AY064391), Melon chlorotic leaf curl virus-[Guatemala] (MCLCuV-[GT]: AF325497), Mungbean yellow mosaic India virus-[Mungbean] (MYMIV-[Mb]: AF416742), Papaya leaf curl virus (PaLCuV: NC_004147), Squash leaf curl virus (SLCV: NC_001936), Squash leaf curl virus-[Cairo] (SLCV-[C]: DQ285019), Squash leaf curl virus-[Israel] (SLCV-[I]: AY206998), Squash leaf curl China virus (SLCCNV: AB027465), Squash leaf curl China virus-[B] (SLCCNV-[B]: AF509743), Squash leaf curl China virus-[K] (SLCCNV-[K]: AF509741), Squash leaf curl China virus-[Pumpkin: Coimbatore] (SLCCNV-[P:C]: AY184487), Squash leaf curl China virus-[Pumpkin: Delhi] (SLCCNV-[P:D]: AY686500), Squash leaf curl China virus-[Pumpkin:Lucknow] (SLCCNV-[P:L]: DQ026296), Squash leaf curl China virus-Philippine (SLCCNV-Ph: AB085793), Squash leaf curl Yunnan virus-[Yunnan 23] (SLCYNV-[Y23]: AJ420319), Squash mild leaf curl virus-Imperial valley (SMLCV-[IV]: NC_004645), Squash mild leaf curl virus-[R] (SMLCV-[R]: AF421552), Tomato leaf curl Karnataka virus (ToLCKV: AY738100), Tomato leaf curl Bangalore virus (ToLCBV: NC_003891), Tomato leaf curl Bangalore virus-[Ban 4] (ToLCBV-[Ban 4]: AF165098), Tomato leaf curl New Delhi virus-Mild (ToLCNDV-Mld: U15016), Tomato leaf curl New Delhi virus-Severe (ToLCNDV-Svr: U15015), Tomato leaf curl New Delhi virus-[Lucknow] (ToLC-V-[Luc]: Y16421), Tomato leaf curl New Delhi virus-[AVT1] (ToLCNDV-[AVT1]: AY428769) and Tomato leaf curl New Delhi virus-[Luffa] (ToLCNDV-[Luffa]: AJ557219), Watermelon chlorotic curly stunt virus (WmCSV: AJ012081), Watermelon chlorotic curly stunt virus-[IR] (WmCSV-[IR]: AJ245652). The phylogenetic relationships among begomoviruses were analyzed comparing amino acids sequences using ClustalW algorithm of the DNASTAR programme, Version 5.01 (DNASTAR Inc., Madison, WI, USA) with the gap weight of 10 and gap length of 0.2.
Results
Field symptoms, Begomovirus Detection and Disease Incidence
In 2003, a severe disease of bottle gourd was observed for the first time in a farmer’s field in Gannore, Haryana. Later, the disease was also observed in other areas of vegetable growing tracts of Delhi and Haryana. The affected plants develop a variety of symptoms characterized by chlorotic mottle, leaf smalling, leaf curling and acute stunting (Fig. 1a, b). The symptoms are most severe in plants infected at an early stage of growth. These plants develop small chlorotic leaves with upward curling and severe stunting symptoms. Such plants do not produce flower and fruit. The plants infected at a later stage develop chlorotic mottling and downward curling of the older leaves. The incidence of the disease in Haryana (Gannore and Bakhtawarpur) was 23.6–36% in 2003–2004, and in Delhi (Asmanpur and IARI) as 4.7–20% in 2005.
Fig. 1.
Disease symptoms of chlorotic curly stunt of bottle gourd (Lagenaria siceraria). a, b Field symptoms. c Greenhouse symptoms following inoculation through whitefly, Bemisia tabaci. d Geminate particles in the diseased leaf of bottle gourd
Field samples from five places in Delhi and Haryana that exhibited typical symptoms were found to contain geminate particles of 18 × 30 nm (Table 1; Fig. 1d). The plants, which showed yellow mosaic with or without blistering also, contained flexuous particles of about 750 nm (Table 1). No virus like particle was detected in plants showing only yellow patches or general yellowing. The begomovirus association with the disease was confirmed by dot blot hybridization with the radio-labeled probe to CP gene of ToLCNDV-Luffa and by PCR with the CP specific primers AVF30 and AVR31 (Fig. 2). In 2006, 16 out of 20 bottle diseased gourd plants tested from the experimental field at IARI showed presence of begomovirus in dot blot (Fig. 2a).
Table 1.
Detection of begomovirus in the field samples of bottle gourd (Lagenaria siceraria) plants collected during 2003–2005 from Haryana and Delhi
| State Place |
Symptoms | Particlea observed | Transmissionb | Dot blotc | PCRd |
|---|---|---|---|---|---|
| Haryana | |||||
| Gannore | Chlorotic mottle, smalling | Geminate | + | + | + |
| Yellowing | No particle | − | θ | − | |
| Yellow mosaic | Geminate, filamentous | − | + | − | |
| Pale yellowing with curling | Geminate | + | + | − | |
| Bakhtawarpur | Yellow mosaic, green blisters | Geminate, filamentous | − | + | + |
| Delhi | |||||
| Asmanpur | Yellow mottle, mild curling | Geminate | + | + | − |
| Gandhi Nagar | Mottling, margin rolling | Geminate | − | + | − |
| IARI | Yellowing, curling | Geminate | − | − | + |
| Pale yellowing, smalling | Geminate | + | − | + | |
| Yellow mottle and curling | Geminate | − | + | + | |
| Yellow spots, no curling, smalling | No particle | − | − | θ | |
| Yellow mottle, marginal bending | Geminate | − | − | + | |
+: Positive result; θ: negative result; –: not tested
aDetermined by electron microscopy
bTransmission by whitefly to bottle gourd
cDot blot hybridization with the probe to CP gene ToLCNDV
dPCR amplification using AVF30 and AVR31 primers
Fig. 2.
Molecular detection of the begomovirus in bottle gourd (Lagenaria siceraria) affected by chlorotic curly stunt disease. a Dot blots of DNA from field samples of bottle gourd hybridized with the radio-labeled probe to CP gene of ToLCNDV-[Luffa]. b, c Polymerase chain reaction showing amplification of putative coat protein (CP) gene (750 bp) in field samples (lanes: 1–4) of bottle gourd (a) and both CP and replication initiator protein gene (1000 bp) in greenhouse sample of BotGn-1 isolate (lanes 1 and 2: with CP primer and lane 3 with Rep primer) (c). M: marker, 1 kb ladder (MBI Fermentas); +ve: positive control; −ve: negative control
Biological Characterization of the Virus
Transmission
The virus isolated from the severely affected bottle gourd plants infected 50–60% bottle gourd test plants by whitefly inoculation. The infected plants developed characteristic symptoms within 7–10 days of inoculation. The first symptoms appeared in second or third true leaf, which showed chlorotic mottling and downward curling. The plants were severely stunted and produced very small new leaves with their margins curled upward (Fig. 2b). The symptoms on the test plants were remarkably similar to those observed in the field. The virus could not be transmitted by sap inoculation through the extracts prepared form field infected plants as well as from the experimentally infected bottle gourd plants to bottle gourd and ridge gourd seedlings. The sap inoculated plants neither produced any symptoms nor tested positive in dot blot hybridization (data not shown).
Host Range
For determining the host range, the virus isolate was inoculated by whitefly to eleven plant species (Table 2). Of these, five plant species belonging to Cucurbitaceae [bottle gourd, cucumber (Cucumissativus), ridge gourd (Luffa acutangula), sponge gourd (L. cylindrica) and round melon (Praecitrullus fistulosus)], and two plant species belonging to Solanaceae [tobacco (Nicotiana tabacum) and tomato (Lycopersicon esculentum)] developed symptoms at 7–11 dpi. The infection in these plant species was further confirmed by dot blot hybridization with probe to the putative CP gene of BotGn-1. Cucumber, ridge gourd, sponge gourd produced yellow spots followed by mosaic. Round melon produced chlorotic spots and mottling symptoms on true leaves, which gradually wilted and withered. The symptom on round melon was most severe, as the infected plants died within 4 weeks of infection. Tobacco and tomato plants developed leaf curl symptoms.
Table 2.
Host range of the begomovirus (BotGn-1 isolate) associated with chlorotic curly stunt disease of bottle gourd (Lagenaria siceraria)
| Plant species inoculateda | No. of infected plants out of five inoculated | Symptoms at dpi | Symptoms | Dot blot |
|---|---|---|---|---|
| Citrullus lunatus | 0 | − | No symptoms | θ |
| Cucumis melo | 0 | − | No symptoms | θ |
| Cucumis sativus | 1 | 10 | Yellow dots | + |
| Cucurbita moschata | 0 | − | No symptoms | θ |
| Lagenaria siceraria | 3 | 7–9 | Chlorotic mottling, leaf curling and stunting | + |
| Luffa cylindrica | 3 | 7 | Yellow dots | + |
| Lycopersicon esculentum | 4 | 7–10 | Leaf curling | + |
| 2 | 11 | Leaf curling | + | |
| Nicotianatabacum | ||||
| Praecitrullus fistulosus | 2 | 9 | Yellow spots, mottling and withering | + |
| Vigna unguiculata | 0 | − | No symptoms | θ |
+: Positive, θ: negative hybridization, dpi: days post inocluation
aBemisia tabaci (5–10 number per plant) were used with 24 h each of acquisition and inoculation access periods for inoculation of the test plant species
Molecular Characterization of the Virus
PCR using CP and Rep genes primers of ToLCNDV resulted in amplification of about 750 and 1000 bp fragments, respectively (Fig. 2). These amplicons were cloned and sequence. The CP consisted of 771 nucleotides (nt) (GenBank accession DQ272540), and the Rep 1081 nt (GenBank accession DQ272539). The BLAST search in GenBank showed closest identity of these sequences with that of ToLCNDV and SLCCNV isolates reported from India (Table 3). The amino acid sequence of the complete CP shared 98.4–100% identity with the various isolates of ToLCNDV and SLCCNV. The N-terminal sequence of CP (first 60 amino acids) was identical with SLCCNV-[P:D] and SLCCNV-[P:L] and with all the isolates of ToLCNDV (Table 3). The Rep was identical with the ToLCND-[Luf] and shared 91.3–97.2% identity with the remaining four other isolates of ToLCNDV (Table 3). The SLCCNV-[P:C], -[P:D] and -[P;L] although were near identical in CP had only 87.5–88.3% identity in Rep. The cucurbit infecting begomoviruses, ChaYMV, CuLCrV, MCLCuV, SLCV, SMLCV and WmCSV, which are not known to occur in India shared only 72.4–77.4% and 51.0–72.8% identity with the BotGn-1 isolate in complete CP and Rep sequences, respectively. The analysis of phylogenetic relationship based on N-terminal 60 aa (Fig. 3a) and complete Rep (Fig. 3b) showed that the BotGn-1 belonged to the ToLCNDV cluster.
Table 3.
Per cent identity of amino acids sequences of putative coat protein (CP) and replication initiator protein (Rep) of the begomovirus associated with the chlorotic curly stunt disease of bottle gourd (BotGn-1 isolate) with that of the selected begomoviruses
| Virus | CP | Rep | |
|---|---|---|---|
| FAA | NAA | FAA | |
| ChaYMV | 74.3 | 70.0 | 72.8 |
| CLCuRV | 91.8 | 81.7 | 75.6 |
| CuLCrV-[AZ] | 74.7 | 41.7 | 52.1 |
| CuLCrV-[CF] | 74.7 | 40.0 | 52.1 |
| LYMV | 96.5 | 93.3 | 72.8 |
| MCLCuV-[CR] | 72.5 | 41.7 | 49.0 |
| MCLCuV-[GT] | 75.5 | 41.7 | 51.0 |
| MYMIV-[Mg] | 74.8 | 25.0 | 70.6 |
| PaLCuV | 91.4 | 86.7 | 66.9 |
| SLCCNV | 94.9 | 91.7 | 79.4 |
| SLCCNV-[B] | 95.3 | 91.7 | 88.2 |
| SLCCNV-[K] | 96.1 | 91.7 | 87.5 |
| SLCCNV-[P:C] | 98.8 | 98.3 | 87.8 |
| SLCCNV-[P:D] | 98.4 | 100 | 88.3 |
| SLCCNV-[P:L] | 99.2 | 100 | 88.3 |
| SLCCNV-Ph | 94.9 | 91.7 | 81.3 |
| SLCV | 74.5 | 43.3 | 51.7 |
| SLCV-[C] | 73.7 | 41.7 | 52.6 |
| SLCV-[I] | 74.5 | 45.0 | – |
| SLCYNV-[Y32] | 77.0 | 73.3 | 67.8 |
| SMLCV-[IV] | 74.9 | 41.7 | 51.6 |
| SMLCV-R | 74.9 | 41.7 | 51.6 |
| ToLCBV | 86.3 | 65.0 | 76.1 |
| ToLCBV-[Ban4] | 85.2 | 65.0 | 76.9 |
| ToLCKV | 94.1 | 90.0 | 78.1 |
| ToLCNDV-[Luc] | 98.0 | 100 | 93.1 |
| ToLCNDV-[Luf] | 99.2 | 100 | 100 |
| ToLCNDV-Mld | 99.2 | 100 | 94.4 |
| ToLCNDV-Svr | 100 | 100 | 97.2 |
| ToLCNDV-[AVT1] | 99.2 | 100 | 91.3 |
| WmCSV | 75.5 | 70.0 | 68.1 |
| WmCSV-[IR] | 77.4 | 68.3 | 67.5 |
FAA full length amino acids sequence, NAA N-terminal 60 amino acids sequence, –: sequence not available
Fig. 3.
Phylogenetic relationship of the begomovirus associated with the bottle gourd chlorotic curly stunt disease (BotGn-1 isolate) with selected begomoviruses based on a N-terminal 60 amino acids sequence of putative coat protein and b complete amino acids sequence of putative replication initiator protein. Trees were constructed using the ClustalW algorithm of the DNASTAR with the gap weight of 10 and gap length of 0.2
Discussion
This paper reports a new disease of bottle gourd from northern India. The disease is designated as bottle gourd chlorotic curly stunt due to the characteristic symptoms, chlorotic mottling, mild curling and excessive reduction in leaf size, and stunting of plants. The disease is highly destructive when plants are infected at early stage of growth, as the affected plants become unproductive and die prematurely.
Symptoms of the disease are similar to watermelon leaf curl disease described from Pakistan [18] and watermelon chlorotic curly stunt disease described from Iran and Sudan [5, 13] which also result in mottling, curling of leaves and stunting of plants. The virus associated with the CCS disease of bottle gourd did not infect watermelon by whitefly inoculation, indicating differences between the viruses or their strains causing these diseases. Whether the viruses associated with the watermelon diseases in Pakistan, Iran and Sudan infect bottle gourd or not is not known. The YVM disease of pumpkin reported from southern India was shown to induce only mild mosaic symptoms on bottle gourd and no symptoms on tomato following whitefly inoculation [20]. The CCS of bottle gourd differs from the YVM disease of pumpkin as it does not induce any symptoms in pumpkin and induces leaf curl symptoms in tomato.
The analysis of putative CP and Rep sequences of the virus showed very close identities to ToLCNDV strains/isolates reported from northern India. The CP and Rep were 100% identical with ToLCND-Svr and- ToLCNDV-[Luf], respectively. The phylogenetic analysis based on CP and Rep showed the closest relationship with ToLCNDV cluster. The current convention of Begomovirus species identification is based on less than 89% nucleotide sequence identity of DNA A, transmission and host range properties [7]. However, the N-terminal region of 60–70 aa of CP of begomoviruses is a close representation of the genome and the sequence of this region is shown to be sufficient to identify a virus isolate [21]. In the present study, the N-terminal region of CP of BotGn-1 was 100% identical with all the isolates of ToLCNDV and two isolates of SLCCNV occurring in northern India. However, biological properties indicated that BotGn-1 is closer to ToLCNDV as it induces leaf curl in tomato and does not infect pumpkin. On the basis of biological and molecular characterization, we conclude that the virus associated with CCS of bottle gourd is a strain of ToLCNDV. ToLCNDV is emerging as a serious constraint in the production of cucurbits in India as it has been shown to cause severe diseases of bitter gourd [12], chayote [17], cucumber [22], winter squash [29], sponge gourd [30] and bottle gourd found in the present study.
Begomoviruses are major threat in numerous crops in India due to favorable environmental conditions and abundance of vector, B. tabaci [35]. Leaf curl of tomato was known to occur in India for nearly 60 years [37], but whitefly transmitted diseases of cucurbits were not serious concern until 1980s [34]. In recent years, however cucurbit-infecting begomoviruses [12, 17, 20, 29, 30] have emerged as a serious threat to cucurbit cultivation, particularly in northern India. As ToLCNDV, which seems to be the major cause of these diseases in northern India has been known for a long time to cause diseases in tomato and luffa but it did not move to the other cucurbits, which are traditionally grown in the summer months.
Acknowledgement
Financial support from Indian Council of Agricultural Research (National Professor’s scheme) is thankfully acknowledged.
References
- 1.Bhargava B, Bhargava KS. Cucurbit mosaic virus in Gorakhpur. Indian J Agric Sci. 1977;47:1–5. [Google Scholar]
- 2.Brown JK, Idris AM, Olsen MW, Meller ME, Isakeit T, Ancios J. Cucurbit leaf curl virus- a new whitefly transmitted geminivirus in Arizona, Texas and Mexico. Plant Dis. 2000;84:809. doi: 10.1094/PDIS.2000.84.7.809A. [DOI] [PubMed] [Google Scholar]
- 3.Brown JK, Idris AM, Rogan D. Melon Chlorotic leaf curl virus-a new begomovirus associated with Bemisia tabaci infestations in Guatemala. Plant Dis. 2001;85:1027. doi: 10.1094/PDIS.2001.85.9.1027C. [DOI] [PubMed] [Google Scholar]
- 4.Brown JK, Idris AM, Alteri C, Stenger DC. Emergence of a new cucurbit- infecting begomovirus species capable of forming viable reassortants with related viruses in the Squash leaf curl virus cluster. Phytopathology. 2002;92:734–742. doi: 10.1094/PHYTO.2002.92.7.734. [DOI] [PubMed] [Google Scholar]
- 5.Dafalla GA, Lecoq H, Kheyr-Pour A, Gronenborn B. Disease and pest outbreak in Sudan, a whitefly transmitted geminivirus associated with yellowing disease of watermelon in Sudan, Arab and near east. Plant Protection Newsletter No. 9:39; 1994.
- 6.Dijkstra J, de Jager CP. Practical plant virology: protocols and exercises. New York: Springer; 1998. p. 459. [Google Scholar]
- 7.Fauquet CM, Stanley J. Geminivirus classification and nomenclature: progress and problems. Ann Appl Biol. 2003;142:165–189. doi: 10.1111/j.1744-7348.2003.tb00241.x. [DOI] [Google Scholar]
- 8.Flock RA, Mayhew D. Squash leaf curl: a new disease of cucurbits in California. Plant Dis. 1981;65:75–76. doi: 10.1094/PD-65-75. [DOI] [Google Scholar]
- 9.Guzman P, Sudarshan MR, Seo YS, Rojas MR, Natwick E, Turini T, Mayberry K, Gilbertson RL. A new bipartite geminivirus (Begomovirus) causing leaf curl and crumpling in cucurbits in the Imperial valley of California. Plant Dis. 2000;84:488. doi: 10.1094/PDIS.2000.84.4.488C. [DOI] [PubMed] [Google Scholar]
- 10.Ingham DJ, Pascal E, Lazarowitz SG. Both bipartite movement proteins define viral host range, but only BL1 determines pathogenicity. Virology. 1995;207:191–204. doi: 10.1006/viro.1995.1066. [DOI] [PubMed] [Google Scholar]
- 11.Kallender H, Petty ITD, Stein VE, Panico M, Blench IP, Etienne AT, Morris HR, Coutts RHA, Buck KW. Identification of the coat protein of Tomato golden mosaic virus. J Gen Virol. 1988;69:1351–1357. doi: 10.1099/0022-1317-69-6-1351. [DOI] [Google Scholar]
- 12.Khan JA, Siddiqui MR, Singh BP. The association of Begomovirus with bitter melon in India. Plant Dis. 2002;86:328. doi: 10.1094/PDIS.2002.86.3.328B. [DOI] [PubMed] [Google Scholar]
- 13.Kheyr-Pour A, Bananej K, Dafalla GA, Caciagli P, Noris E, Ahoonmanesh A, Lecoq H, Gronenborn B. Watermelon chlorotic curly stunt virus from the Sudan and Iran: sequence comparisons and identification of a whitefly-transmission determinant. Phytopathology. 2000;90:629–635. doi: 10.1094/PHYTO.2000.90.6.629. [DOI] [PubMed] [Google Scholar]
- 14.Kon T, Dolores M, Bajet NB, Hase S, Takahashi H, Ikegami M. Molecular characterization of a strain of Squash leaf curl China virus from the Philippines. J Phytopathol. 2003;15:535–539. doi: 10.1046/j.1439-0434.2003.00764.x. [DOI] [Google Scholar]
- 15.Lazarowitz SG. Geminiviruses: genome structure and gene functions. Crit Rev Sci. 1992;11:327–349. [Google Scholar]
- 16.Lazarowitz SG, Lazdins IB. Infectivity and complete nucleotide sequence of the cloned genomic components of a bipartite squash leaf curl virus with a broad host range phenotype. Virology. 1991;180:58–69. doi: 10.1016/0042-6822(91)90009-Z. [DOI] [PubMed] [Google Scholar]
- 17.Mandal B, Mandal S, Sohrab SS, Pun KB, Varma A. A new yellow mosaic disease of chayote in India. Plant Pathol. 2004;53:797. doi: 10.1111/j.1365-3059.2004.01075.x. [DOI] [Google Scholar]
- 18.Mansoor S, Khan SH, Hussain M, Mushtaq N, Zafar Y, Malik KA. Evidence that watermelon leaf curl disease in Pakistan is associated with Tomato leaf curl virus-India, a bipartite Begomovirus. Plant Dis. 2000;84:102. doi: 10.1094/PDIS.2000.84.1.102A. [DOI] [PubMed] [Google Scholar]
- 19.Mantri NL, Kitkatu AS, Misal MB, Ravi KS. First report of papaya ring spot virus-W in bottle gourd (Lagenaria siceraria) from India. New Dis Rep. 2004;10:35. [Google Scholar]
- 20.Muniyappa V, Maruthi MN, Babitha CR, Colvin J, Briddon RW, Rangaswamy KT. Characterization of pumpkin yellow vein mosaic virus from India. Ann Appl Biol. 2003;142:323–331. doi: 10.1111/j.1744-7348.2003.tb00257.x. [DOI] [Google Scholar]
- 21.Padidam M, Beachy RN, Fauquet CM. Classification and identification of geminivirus using sequence comparison. J Gen Virol. 1995;76:249–263. doi: 10.1099/0022-1317-76-2-249. [DOI] [PubMed] [Google Scholar]
- 22.Raj SK, Singh BP. Association of geminivirus infection with yellow green mosaic disease of Cucumis sativus: diagnosis by nucleic acid probes. Indian J Exp Biol. 1996;34:603–605. [PubMed] [Google Scholar]
- 23.Raychaudhuri M, Varma A. Mosaic disease of muskmelon, caused by a minor variant of cucumber green mottle mosaic virus. Phytopathol Zeitschrift. 1978;93:120–125. doi: 10.1111/j.1439-0434.1978.tb03645.x. [DOI] [Google Scholar]
- 24.Revill PA, Ha CV, Porchun SC, Vu MT, Dale JL. The complete nucleotide sequence of two district geminiviruses infecting cucurbits in Vietnam. Arch Virol. 2003;148:1523–1541. doi: 10.1007/s00705-003-0109-6. [DOI] [PubMed] [Google Scholar]
- 25.Sambrook J, Fritsch EF, Maniatis T. Molecular cloning—a laboratory manual. New York, USA: Cold Spring Harbor Laboratory; 1989. [Google Scholar]
- 26.Samretwanich K, Chiemsombat P, Kittipakorn K, Ikegami M. Tomato leaf curl geminivirus associated with cucumber yellow leaf disease in Thailand. J Phytopathol. 2000;148:615–617. [Google Scholar]
- 27.Samretwanich K, Chiemsombat P, Kittipakorn K, Ikegami M. Yellow leaf disease of cantaloupe and wax gourd from Thailand caused by Tomato leaf curl virus. Plant Dis. 2000;84:200. doi: 10.1094/PDIS.2000.84.2.200C. [DOI] [PubMed] [Google Scholar]
- 28.Sanderfoot AA, Lazarowitz SG. Cooperation in viral movement: the geminivirus BL1 movement protein interacts with BR1 and redirects it from the nucleus to the cell periphery. Plant Cell. 1995;7:1185–1194. doi: 10.1105/tpc.7.8.1185. [DOI] [PMC free article] [PubMed] [Google Scholar]
- 29.Singh R, Raj SK, Chanadra G. Association of monopartite Begomovirus with yellow mosaic disease of pumpkin in India. Plant Dis. 2001;85:1029. doi: 10.1094/PDIS.2001.85.9.1029C. [DOI] [PubMed] [Google Scholar]
- 30.Sohrab SS, Mandal B, Pant RP, Varma A. First report of association of Tomato leaf curl New Delhi virus with yellow mosaic disease of Luffa cylindrica in India. Plant Dis. 2003;87:1148. doi: 10.1094/PDIS.2003.87.9.1148A. [DOI] [PubMed] [Google Scholar]
- 31.Sunter G, Bisaro DM. Transactivation of geminivirus AR1 and BR1 gene expression by the viral AL2 gene product occurs at the level of transcription. Plant Cell. 1992;4:1321–1331. doi: 10.1105/tpc.4.10.1321. [DOI] [PMC free article] [PubMed] [Google Scholar]
- 32.Sunter G, Hartitz MD, Hormuzdi SG, Brough CL, Bisaro DM. Genetic analysis of tomato golden mosaic virus: ORF AL2 is required for coat protein accumulation while ORF AL3 is necessary for efficient DNA replication. Virology. 1990;179:69–77. doi: 10.1016/0042-6822(90)90275-V. [DOI] [PubMed] [Google Scholar]
- 33.Thottappilly G, Winter S, Maxwell D, Kamal S. Chayote yellow mosaic virus DNA-A, complete sequence. GenBank AJ223191; 1997. www.ncbi.nlm.nih.gov.
- 34.Varma A, Giri BK. Virus disease of cucurbits in India. In: Nayer NM, More TA, editors. Cucurbits. New Delhi: Oxford and IBH Publishing House Pvt Ltd; 1998. [Google Scholar]
- 35.Varma A, Malathi VG. Emerging geminivirus problem a serious threat to sustainable crop production. Ann Appl Biol. 2003;142:145–164. doi: 10.1111/j.1744-7348.2003.tb00240.x. [DOI] [Google Scholar]
- 36.Vasudeva RS, Lal TB. A mosaic disease of bottle gourd. Indian J Agric Sci. 1943;13:182–198. [Google Scholar]
- 37.Vasudeva RS, Samraj J. A leaf curl disease of tomato. Phytopathology. 1948;38:364–369. [Google Scholar]
- 38.Verma R, Ahlawat YS, Tomer SPS, Pant RP. First report of Zucchini yellow mosaic virus (ZYMV) in bottle gourd in India. Plant Dis. 2004;88:426. doi: 10.1094/PDIS.2004.88.4.426C. [DOI] [PubMed] [Google Scholar]
- 39.Xie Y, Zhou XP. Molecular characterization of squash leaf curl Yunnan virus, a new begomovirus and evidence for recombination. Arch Virol. 2003;148:2047–2054. doi: 10.1007/s00705-003-0153-2. [DOI] [PubMed] [Google Scholar]



