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. 1971 Apr;7(4):504–514. doi: 10.1128/jvi.7.4.504-514.1971

Analysis of Arbovirus Ribonucleic Acid Forms by Polyacrylamide Gel Electrophoresis

Judith G Levin a,1, Robert M Friedman a
PMCID: PMC356151  PMID: 5165207

Abstract

Viral ribonucleic acid (RNA) from Semliki Forest virus- and Sindbis virus-infected cells was analyzed by electrophoresis on polyacrylamide gels. In contrast to earlier results obtained by sucrose density gradient centrifugation, all of the known viral RNA forms (i.e., the 42S, 26S, replicative form, and replicative intermediate) were very clearly separated. The high resolution of the electrophoretic method permitted the identification of two new single-stranded RNA species. In addition, the replicative form was shown to be heterogeneous and to consist of at least two forms. The results suggested that the replicative forms occur in vivo although in relatively small amounts.

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Selected References

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  1. Bishop D. H., Claybrook J. R., Spiegelman S. Electrophoretic separation of viral nucleic acids on polyacrylamide gels. J Mol Biol. 1967 Jun 28;26(3):373–387. doi: 10.1016/0022-2836(67)90310-5. [DOI] [PubMed] [Google Scholar]
  2. Borst P., Weissmann C. Replication of viral RNA, 8. Studies on the enzymatic mechanism of replication of MS2 RNA. Proc Natl Acad Sci U S A. 1965 Sep;54(3):982–987. doi: 10.1073/pnas.54.3.982. [DOI] [PMC free article] [PubMed] [Google Scholar]
  3. Burge B. W., Pfefferkorn E. R. Temperature-sensitive mutants of Sindbis virus: biochemical correlates of complementation. J Virol. 1967 Oct;1(5):956–962. doi: 10.1128/jvi.1.5.956-962.1967. [DOI] [PMC free article] [PubMed] [Google Scholar]
  4. CHENG P. Y. Purification, size, and morphology of a mosquitoborne animal virus, Semliki Forest virus. Virology. 1961 May;14:124–131. doi: 10.1016/0042-6822(61)90139-8. [DOI] [PubMed] [Google Scholar]
  5. Caliguiri L. A., Tamm I. Membranous structures associated with translation and transcription of poliovirus RNA. Science. 1969 Nov 14;166(3907):885–886. doi: 10.1126/science.166.3907.885. [DOI] [PubMed] [Google Scholar]
  6. Cartwright K. L., Burke D. Virus nucleic acids formed in chick embryo cells infected with Semliki Forest virus. J Gen Virol. 1970 Feb;6(2):231–248. doi: 10.1099/0022-1317-6-2-231. [DOI] [PubMed] [Google Scholar]
  7. Chrambach A. Device for sectioning of polyacrylamide gel cylinders and its use in determining biological activity in the sections. Anal Biochem. 1966 Jun;15(3):544–548. doi: 10.1016/0003-2697(66)90121-7. [DOI] [PubMed] [Google Scholar]
  8. Darnell J. E., Jr Ribonucleic acids from animal cells. Bacteriol Rev. 1968 Sep;32(3):262–290. doi: 10.1128/br.32.3.262-290.1968. [DOI] [PMC free article] [PubMed] [Google Scholar]
  9. Dobos P., Faulkner P. Molecular weight of Sindbis virus ribonucleic acid as measured by polyacrylamide gel electrophoresis. J Virol. 1970 Jul;6(1):145–147. doi: 10.1128/jvi.6.1.145-147.1970. [DOI] [PMC free article] [PubMed] [Google Scholar]
  10. Friedman R. M., Berezesky I. K. Cytoplasmic fractions associated with Semliki Forest virus ribonucleic acid replication. J Virol. 1967 Apr;1(2):374–383. doi: 10.1128/jvi.1.2.374-383.1967. [DOI] [PMC free article] [PubMed] [Google Scholar]
  11. Friedman R. M., Fantes K. H., Levy H. B., Carter W. B. Interferon action on parental Semliki forest virus ribonucleic acid. J Virol. 1967 Dec;1(6):1168–1173. doi: 10.1128/jvi.1.6.1168-1173.1967. [DOI] [PMC free article] [PubMed] [Google Scholar]
  12. Friedman R. M., Levy H. B., Carter W. B. Replication of semliki forest virus: three forms of viral RNA produced during infection. Proc Natl Acad Sci U S A. 1966 Aug;56(2):440–446. doi: 10.1073/pnas.56.2.440. [DOI] [PMC free article] [PubMed] [Google Scholar]
  13. Friedman R. M. Replicative intermediate of an arbovirus. J Virol. 1968 Jun;2(6):547–552. doi: 10.1128/jvi.2.6.547-552.1968. [DOI] [PMC free article] [PubMed] [Google Scholar]
  14. LOWRY O. H., ROSEBROUGH N. J., FARR A. L., RANDALL R. J. Protein measurement with the Folin phenol reagent. J Biol Chem. 1951 Nov;193(1):265–275. [PubMed] [Google Scholar]
  15. Loening U. E. The fractionation of high-molecular-weight ribonucleic acid by polyacrylamide-gel electrophoresis. Biochem J. 1967 Jan;102(1):251–257. doi: 10.1042/bj1020251. [DOI] [PMC free article] [PubMed] [Google Scholar]
  16. Martin E. M., Sonnabend J. A. Ribonucleic acid polymerase catalyzing synthesis of double-stranded arbovirus ribonucleic acid. J Virol. 1967 Feb;1(1):97–109. doi: 10.1128/jvi.1.1.97-109.1967. [DOI] [PMC free article] [PubMed] [Google Scholar]
  17. Mss B., Filler R. Irreversible effects of cycloheximide during the early period of vaccinia virus replicaon. J Virol. 1970 Feb;5(2):99–108. doi: 10.1128/jvi.5.2.99-108.1970. [DOI] [PMC free article] [PubMed] [Google Scholar]
  18. Mécs E., Sonnabend J. A., Martin E. M., Fantes K. H. The effect of interferon on the synthesis of RNA in chick cells infected with Semliki forest virus. J Gen Virol. 1967 Jan;1(1):25–40. doi: 10.1099/0022-1317-1-1-25. [DOI] [PubMed] [Google Scholar]
  19. Noble J., Kass S. J., Levintow L. Analysis of poliovirus-specific RNA in infected HeLa cells by polyacrylamide gel electrophoresis. Virology. 1969 Apr;37(4):535–544. doi: 10.1016/0042-6822(69)90271-2. [DOI] [PubMed] [Google Scholar]
  20. Pace N. R., Bishop D. H., Spiegelman S. Examination of the Qbeta-replicase reaction by sucrose gradient and gel electrophoresis. J Virol. 1967 Aug;1(4):771–778. doi: 10.1128/jvi.1.4.771-778.1967. [DOI] [PMC free article] [PubMed] [Google Scholar]
  21. Peacock A. C., Dingman C. W. Molecular weight estimation and separation of ribonucleic acid by electrophoresis in agarose-acrylamide composite gels. Biochemistry. 1968 Feb;7(2):668–674. doi: 10.1021/bi00842a023. [DOI] [PubMed] [Google Scholar]
  22. Pons M. W., Hirst G. K. Polyacrylamide gel electrophoresis of influenza virus RNA. Virology. 1968 Feb;34(2):385–388. doi: 10.1016/0042-6822(68)90257-2. [DOI] [PubMed] [Google Scholar]
  23. Shatkin A. J., Sipe J. D., Loh P. Separation of ten reovirus genome segments by polyacrylamide gel electrophoresis. J Virol. 1968 Oct;2(10):986–991. doi: 10.1128/jvi.2.10.986-991.1968. [DOI] [PMC free article] [PubMed] [Google Scholar]
  24. Sonnabend J. A., Martin E. M., Mécs E. Viral specific RNAs in infected cells. Nature. 1967 Jan 28;213(5074):365–367. doi: 10.1038/213365a0. [DOI] [PubMed] [Google Scholar]
  25. Sreevalsan T., Lockart R. Z., Jr, Dodson M. L., Jr, Hartman K. A. Replication of Western equine encephalomyelitis virus. I. Some chemical and physical characteristics of viral ribonucleic acid. J Virol. 1968 Jun;2(6):558–566. doi: 10.1128/jvi.2.6.558-566.1968. [DOI] [PMC free article] [PubMed] [Google Scholar]
  26. Sreevalsan T., Lockart R. Z., Jr Heterogeneous RNA's occurring during the replication of Western equine encephalomyelitis virus. Proc Natl Acad Sci U S A. 1966 Apr;55(4):974–981. doi: 10.1073/pnas.55.4.974. [DOI] [PMC free article] [PubMed] [Google Scholar]
  27. Sreevalsan T., Yin F. H. Sindbis virus-induced viral ribonucleic acid polymerase. J Virol. 1969 Jun;3(6):599–604. doi: 10.1128/jvi.3.6.599-604.1969. [DOI] [PMC free article] [PubMed] [Google Scholar]

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