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Acta Crystallographica Section E: Structure Reports Online logoLink to Acta Crystallographica Section E: Structure Reports Online
. 2012 Nov 3;68(Pt 12):m1435. doi: 10.1107/S1600536812044431

Poly[(μ3-pyridine-4-carboxyl­ato-κ3 O:O′:N)(pyridin-1-ium-4-carboxyl­ato-κO)(thio­cyanato-κN)cobalt(II)]

Tristan Neumann a, Julia Werner a, Inke Jess a, Christian Näther a,*
PMCID: PMC3588705  PMID: 23468670

Abstract

In the title compound, [Co(C6H5NO2)(NCS)(C6H4NO2)]n, the Co2+ cation is coordinated by one N and two O atoms of three bridging pyridine-4-carboxyl­ate anions, one O atom of one zwitterionic pyridinium-4-carboxyl­ate ligand and one terminal N-bonding thio­cyanate anion within a distorted N2O3 trigonal bipyramid. The bridging coordination mode of the ligands leads to the formation of layers parallel to (-101). N—H⋯O hydrogen-bonding inter­actions within the layers and S⋯S contacts of 3.257 (3) Å between the layers lead to the cohesion of the structure.

Related literature  

For general background information on the synthesis and properties of transition metal–thio­cyanate coordination polymers, see: Boeckmann & Näther (2010, 2011); Wöhlert et al. (2011).graphic file with name e-68-m1435-scheme1.jpg

Experimental  

Crystal data  

  • [Co(C6H5NO2)(NCS)(C6H4NO2)]

  • M r = 362.22

  • Monoclinic, Inline graphic

  • a = 8.7857 (7) Å

  • b = 13.5401 (8) Å

  • c = 12.2054 (9) Å

  • β = 95.740 (6)°

  • V = 1444.67 (18) Å3

  • Z = 4

  • Mo Kα radiation

  • μ = 1.35 mm−1

  • T = 293 K

  • 0.18 × 0.13 × 0.04 mm

Data collection  

  • Stoe IPDS-2 diffractometer

  • Absorption correction: numerical (X-SHAPE and X-RED32; Stoe & Cie, 2008) T min = 0.808, T max = 0.954

  • 12489 measured reflections

  • 2844 independent reflections

  • 2353 reflections with I > 2σ(I)

  • R int = 0.041

Refinement  

  • R[F 2 > 2σ(F 2)] = 0.045

  • wR(F 2) = 0.098

  • S = 1.13

  • 2844 reflections

  • 199 parameters

  • H-atom parameters constrained

  • Δρmax = 0.46 e Å−3

  • Δρmin = −0.39 e Å−3

Data collection: X-AREA (Stoe & Cie, 2008); cell refinement: X-AREA; data reduction: X-AREA; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008); molecular graphics: XP in SHELXTL (Sheldrick, 2008) and DIAMOND (Brandenburg, 2011); software used to prepare material for publication: publCIF (Westrip, 2010).

Supplementary Material

Crystal structure: contains datablock(s) I, global. DOI: 10.1107/S1600536812044431/wm2684sup1.cif

e-68-m1435-sup1.cif (21.8KB, cif)

Structure factors: contains datablock(s) I. DOI: 10.1107/S1600536812044431/wm2684Isup2.hkl

e-68-m1435-Isup2.hkl (139.7KB, hkl)

Additional supplementary materials: crystallographic information; 3D view; checkCIF report

Table 1. Selected bond lengths (Å).

Co1—O22 2.004 (2)
Co1—O21i 2.004 (2)
Co1—N1 2.010 (4)
Co1—O12 2.097 (2)
Co1—N21ii 2.146 (2)

Symmetry codes: (i) Inline graphic; (ii) Inline graphic.

Table 2. Hydrogen-bond geometry (Å, °).

D—H⋯A D—H H⋯A DA D—H⋯A
N11—H1N⋯O11iii 0.86 1.80 2.561 (4) 147

Symmetry code: (iii) Inline graphic.

Acknowledgments

We gratefully acknowledge financial support by the DFG (project No. NA 720/3–1) and the State of Schleswig–Holstein. We thank Professor Dr Wolfgang Bensch for access to his experimental facilities.

supplementary crystallographic information

Comment

The title compound was prepared within a project on the synthesis and properties of transition metal thiocyanato coordination polymers (Boeckmann & Näther, 2010, 2011; Wöhlert et al., 2011). During our attempts to prepare a one-dimensional coordination polymer based on pyridine-4-carboxylic acid as a co-ligand, crystals of the title compound, [Co(NCS)(C6H4NO2)(C6H5NO2)], (I), were obtained serendipitously and characterized by single crystal X-ray diffraction.

In the crystal structure of (I), the cobalt(II) cation is coordinated by one terminally O-bonded pyridinium-4-carboxylate ligand, one terminally N-bonded thiocyanate anion, one N-bonded µ-1,3,6-bridging pyridine-4-carboxylate and two O-bonded µ-1,3,6-bridging pyridine-4-carboxylate anions (Fig. 1). The coordination polyhedron of the Co2+ cations can be described as a distorted trigonal bipyramid (Fig. 1, Table 1).

The Co2+ cations are µ-1,3 bridged via pyridine-4-carboxylato anions into dimers, which are further connected into layers parallel to (101) (Fig. 2). The Co···Co distance within the dimer amounts to 3.4951 (6) Å. Within the layers N—H···O hydrogen bonding between the bridging pyridine-4-carboxylate anions and the non-bridging pyridinium carboxylate ligands (Fig. 3 and Table 2) is present. A short S···S contact of 3.257 (3) Å between the layers is also observed.

Experimental

Cobalt thiocyanate and pyridine-4-carboxylic acid were purchased from Alfa Aesar. The title compound was prepared by the reaction of 43.8 mg Co(NCS)2 (0.25 mmol), and 61.6 mg pyridine-4-carboxylic acid (0.50 mmol) in 1.5 mL ethanol at 354 K in a closed 10 ml glas culture tube. After several days pink block-shaped crystals of the title compound were obtained.

Refinement

The C-H and N-H H atoms were localized in a difference map but were positioned with idealized geometry and were refined isotropically with Uiso(H) = 1.2 Ueq(C,N) using a riding model with C—H = 0.93 Å and N—H = 0.86 Å.

Figures

Fig. 1.

Fig. 1.

: The coordination environment of the Co2+ cation in the title compound with labelling and displacement ellipsoids drawn at the 50% probability level. [Symmetry codes: i = -x+1,-y+1,-z+1, ii = -x+1/2, y+1/2, -z+1/2.]

Fig. 2.

Fig. 2.

: The layers parallel to (101) in the title compound in a projection along the a axis. For clarity, the non-bridging ligands and the thiocyanato anions are not shown.

Fig. 3.

Fig. 3.

: The N—H···O hydrogen bonding interactions (dashed lines) within the layers in the crystal structure of the title compound.

Crystal data

[Co(C6H5NO2)(NCS)(C6H4NO2)] F(000) = 732
Mr = 362.22 Dx = 1.665 Mg m3
Monoclinic, P21/n Mo Kα radiation, λ = 0.71073 Å
Hall symbol: -P 2yn Cell parameters from 12489 reflections
a = 8.7857 (7) Å θ = 2.3–26.0°
b = 13.5401 (8) Å µ = 1.35 mm1
c = 12.2054 (9) Å T = 293 K
β = 95.740 (6)° Block, pink
V = 1444.67 (18) Å3 0.18 × 0.13 × 0.04 mm
Z = 4

Data collection

Stoe IPDS-2 diffractometer 2844 independent reflections
Radiation source: fine-focus sealed tube 2353 reflections with I > 2σ(I)
Graphite monochromator Rint = 0.041
ω scans θmax = 26.0°, θmin = 2.3°
Absorption correction: numerical (X-SHAPE and X-RED32; Stoe & Cie, 2008) h = −9→10
Tmin = 0.808, Tmax = 0.954 k = −16→16
12489 measured reflections l = −15→15

Refinement

Refinement on F2 Primary atom site location: structure-invariant direct methods
Least-squares matrix: full Secondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.045 Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.098 H-atom parameters constrained
S = 1.13 w = 1/[σ2(Fo2) + (0.0434P)2 + 0.689P] where P = (Fo2 + 2Fc2)/3
2844 reflections (Δ/σ)max < 0.001
199 parameters Δρmax = 0.46 e Å3
0 restraints Δρmin = −0.39 e Å3

Special details

Geometry. All esds (except the esd in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell esds are taken into account individually in the estimation of esds in distances, angles and torsion angles; correlations between esds in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell esds is used for estimating esds involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > 2sigma(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.

Fractional atomic coordinates and isotropic or equivalent isotropic displacement parameters (Å2)

x y z Uiso*/Ueq
Co1 0.55767 (5) 0.54579 (3) 0.37683 (3) 0.04212 (15)
N1 0.6768 (4) 0.5335 (2) 0.2453 (3) 0.0650 (8)
C1 0.7529 (4) 0.5189 (3) 0.1751 (3) 0.0569 (9)
S1 0.85857 (16) 0.50015 (10) 0.07668 (11) 0.0870 (4)
O11 0.7180 (4) 0.3217 (2) 0.3482 (2) 0.0961 (12)
N11 1.0561 (4) 0.2118 (2) 0.6656 (2) 0.0602 (8)
H1N 1.1155 0.1797 0.7133 0.072*
C11 1.0285 (5) 0.3058 (3) 0.6833 (3) 0.0691 (11)
H11 1.0737 0.3363 0.7467 0.083*
O12 0.7060 (4) 0.44642 (18) 0.4654 (2) 0.0746 (9)
C12 0.9336 (5) 0.3592 (3) 0.6092 (3) 0.0626 (10)
H12 0.9141 0.4255 0.6219 0.075*
C13 0.8682 (4) 0.3134 (2) 0.5164 (3) 0.0472 (8)
C14 0.9021 (6) 0.2159 (3) 0.4995 (3) 0.0731 (13)
H14 0.8619 0.1840 0.4356 0.088*
C15 0.9951 (6) 0.1659 (3) 0.5768 (3) 0.0797 (14)
H15 1.0155 0.0993 0.5667 0.096*
C16 0.7540 (5) 0.3656 (3) 0.4352 (3) 0.0585 (10)
N21 0.0790 (3) 0.15794 (17) 0.20950 (19) 0.0409 (6)
C21 0.1656 (4) 0.1340 (2) 0.3023 (3) 0.0541 (9)
H21 0.1687 0.0682 0.3243 0.065*
O21 0.3758 (3) 0.35997 (15) 0.50108 (16) 0.0480 (5)
O22 0.3902 (3) 0.44629 (15) 0.34512 (17) 0.0468 (5)
C22 0.2501 (4) 0.2017 (2) 0.3666 (3) 0.0525 (9)
H22 0.3069 0.1817 0.4311 0.063*
C23 0.2502 (4) 0.2995 (2) 0.3350 (2) 0.0392 (7)
C24 0.1599 (4) 0.3245 (2) 0.2392 (3) 0.0520 (8)
H24 0.1560 0.3896 0.2146 0.062*
C25 0.0765 (4) 0.2528 (2) 0.1808 (3) 0.0503 (8)
H25 0.0149 0.2714 0.1177 0.060*
C26 0.3462 (4) 0.3749 (2) 0.3992 (2) 0.0397 (7)

Atomic displacement parameters (Å2)

U11 U22 U33 U12 U13 U23
Co1 0.0532 (3) 0.0318 (2) 0.0380 (2) −0.00216 (19) −0.01220 (16) −0.00046 (16)
N1 0.061 (2) 0.0587 (18) 0.076 (2) 0.0046 (16) 0.0107 (17) −0.0018 (16)
C1 0.055 (2) 0.0454 (18) 0.070 (2) −0.0019 (16) 0.0022 (19) −0.0096 (16)
S1 0.0904 (9) 0.0886 (8) 0.0864 (8) −0.0032 (7) 0.0312 (7) −0.0235 (7)
O11 0.144 (3) 0.0572 (16) 0.0716 (18) 0.0320 (18) −0.066 (2) −0.0231 (14)
N11 0.0593 (19) 0.0640 (19) 0.0532 (17) 0.0088 (15) −0.0147 (14) 0.0118 (14)
C11 0.078 (3) 0.066 (2) 0.056 (2) −0.016 (2) −0.031 (2) 0.0079 (18)
O12 0.100 (2) 0.0499 (14) 0.0645 (15) 0.0289 (14) −0.0373 (15) −0.0134 (12)
C12 0.077 (3) 0.0465 (18) 0.058 (2) −0.0028 (18) −0.0265 (19) −0.0022 (15)
C13 0.0520 (19) 0.0437 (16) 0.0430 (16) 0.0054 (14) −0.0095 (14) −0.0023 (13)
C14 0.105 (3) 0.057 (2) 0.049 (2) 0.030 (2) −0.031 (2) −0.0147 (17)
C15 0.109 (4) 0.063 (2) 0.061 (2) 0.037 (2) −0.023 (2) −0.0084 (19)
C16 0.072 (2) 0.0440 (18) 0.0532 (19) 0.0084 (17) −0.0277 (17) −0.0045 (15)
N21 0.0492 (15) 0.0369 (13) 0.0350 (12) −0.0022 (11) −0.0040 (11) −0.0004 (10)
C21 0.080 (2) 0.0332 (15) 0.0446 (17) −0.0082 (15) −0.0168 (16) 0.0043 (13)
O21 0.0702 (15) 0.0338 (10) 0.0367 (11) −0.0032 (10) −0.0108 (10) −0.0008 (8)
O22 0.0565 (13) 0.0368 (11) 0.0444 (11) −0.0065 (10) −0.0086 (10) 0.0029 (9)
C22 0.076 (2) 0.0396 (16) 0.0373 (15) −0.0055 (16) −0.0168 (15) 0.0026 (12)
C23 0.0497 (18) 0.0340 (14) 0.0324 (14) −0.0022 (13) −0.0037 (13) −0.0027 (11)
C24 0.066 (2) 0.0332 (15) 0.0518 (18) −0.0011 (14) −0.0194 (16) 0.0025 (13)
C25 0.063 (2) 0.0376 (16) 0.0458 (17) 0.0009 (15) −0.0183 (15) −0.0002 (13)
C26 0.0462 (17) 0.0309 (14) 0.0402 (15) 0.0021 (12) −0.0054 (13) −0.0014 (11)

Geometric parameters (Å, º)

Co1—O22 2.004 (2) C14—C15 1.364 (5)
Co1—O21i 2.004 (2) C14—H14 0.9300
Co1—N1 2.010 (4) C15—H15 0.9300
Co1—O12 2.097 (2) N21—C25 1.331 (4)
Co1—N21ii 2.146 (2) N21—C21 1.339 (4)
N1—C1 1.155 (5) N21—Co1iii 2.146 (2)
C1—S1 1.610 (4) C21—C22 1.376 (4)
O11—C16 1.230 (4) C21—H21 0.9300
N11—C15 1.316 (5) O21—C26 1.261 (3)
N11—C11 1.318 (5) O21—Co1i 2.004 (2)
N11—H1N 0.8600 O22—C26 1.253 (3)
C11—C12 1.373 (5) C22—C23 1.379 (4)
C11—H11 0.9300 C22—H22 0.9300
O12—C16 1.242 (4) C23—C24 1.388 (4)
C12—C13 1.366 (4) C23—C26 1.495 (4)
C12—H12 0.9300 C24—C25 1.373 (4)
C13—C14 1.374 (5) C24—H24 0.9300
C13—C16 1.514 (4) C25—H25 0.9300
O22—Co1—O21i 136.53 (10) N11—C15—H15 119.9
O22—Co1—N1 102.78 (12) C14—C15—H15 119.9
O21i—Co1—N1 120.67 (12) O11—C16—O12 128.1 (3)
O22—Co1—O12 94.28 (10) O11—C16—C13 115.8 (3)
O21i—Co1—O12 84.54 (9) O12—C16—C13 116.0 (3)
N1—Co1—O12 90.72 (13) C25—N21—C21 116.7 (3)
O22—Co1—N21ii 90.97 (9) C25—N21—Co1iii 124.0 (2)
O21i—Co1—N21ii 91.26 (9) C21—N21—Co1iii 119.1 (2)
N1—Co1—N21ii 88.66 (12) N21—C21—C22 123.3 (3)
O12—Co1—N21ii 174.71 (11) N21—C21—H21 118.3
C1—N1—Co1 173.2 (3) C22—C21—H21 118.3
N1—C1—S1 179.2 (4) C26—O21—Co1i 130.33 (18)
C15—N11—C11 121.6 (3) C26—O22—Co1 132.53 (19)
C15—N11—H1N 119.2 C21—C22—C23 119.7 (3)
C11—N11—H1N 119.2 C21—C22—H22 120.1
N11—C11—C12 120.6 (3) C23—C22—H22 120.1
N11—C11—H11 119.7 C22—C23—C24 117.0 (3)
C12—C11—H11 119.7 C22—C23—C26 121.7 (3)
C16—O12—Co1 128.6 (2) C24—C23—C26 121.4 (3)
C13—C12—C11 119.0 (3) C25—C24—C23 119.7 (3)
C13—C12—H12 120.5 C25—C24—H24 120.2
C11—C12—H12 120.5 C23—C24—H24 120.2
C12—C13—C14 118.7 (3) N21—C25—C24 123.5 (3)
C12—C13—C16 121.8 (3) N21—C25—H25 118.2
C14—C13—C16 119.4 (3) C24—C25—H25 118.2
C15—C14—C13 119.8 (3) O22—C26—O21 126.8 (3)
C15—C14—H14 120.1 O22—C26—C23 116.0 (2)
C13—C14—H14 120.1 O21—C26—C23 117.2 (3)
N11—C15—C14 120.1 (4)

Symmetry codes: (i) −x+1, −y+1, −z+1; (ii) −x+1/2, y+1/2, −z+1/2; (iii) −x+1/2, y−1/2, −z+1/2.

Hydrogen-bond geometry (Å, º)

D—H···A D—H H···A D···A D—H···A
N11—H1N···O11iv 0.86 1.80 2.561 (4) 147

Symmetry code: (iv) x+1/2, −y+1/2, z+1/2.

Footnotes

Supplementary data and figures for this paper are available from the IUCr electronic archives (Reference: WM2684).

References

  1. Boeckmann, J. & Näther, C. (2010). Dalton Trans. 39, 11019–11026. [DOI] [PubMed]
  2. Boeckmann, J. & Näther, C. (2011). Chem. Commun. 47, 7104–7106. [DOI] [PubMed]
  3. Brandenburg, K. (2011). DIAMOND Crystal Impact GbR, Bonn, Germany.
  4. Sheldrick, G. M. (2008). Acta Cryst. A64, 112–122. [DOI] [PubMed]
  5. Stoe & Cie (2008). X-AREA, X-RED32 and X-SHAPE Stoe & Cie, Darmstadt, Germany.
  6. Westrip, S. P. (2010). J. Appl. Cryst. 43, 920–925.
  7. Wöhlert, S., Boeckmann, J., Wriedt, M. & Näther, C. (2011). Angew. Chem. Int. Ed. 50, 6920–6923. [DOI] [PubMed]

Associated Data

This section collects any data citations, data availability statements, or supplementary materials included in this article.

Supplementary Materials

Crystal structure: contains datablock(s) I, global. DOI: 10.1107/S1600536812044431/wm2684sup1.cif

e-68-m1435-sup1.cif (21.8KB, cif)

Structure factors: contains datablock(s) I. DOI: 10.1107/S1600536812044431/wm2684Isup2.hkl

e-68-m1435-Isup2.hkl (139.7KB, hkl)

Additional supplementary materials: crystallographic information; 3D view; checkCIF report


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