Bis{2-[(phenyl­imino)­meth­yl]-1H-pyrrol-1-ido}palladium(II)

Abstract

In the title complex, [Pd(C₁₁H₉N₂)₂], the Pd^II atom is located on an inversion centre and has a square-planar coordination geometry. The phenyl substituents at the imine N atoms make a dihedral angle of 75.0 (6)° with respect to the PdN₄ plane.

Related literature  

For structure analyses of the free ligand N-[(1H-pyrrol-2-yl)methyl­ene]aniline, see: Gomes et al. (2010 ▶); Crestani et al. (2011 ▶). For the structure of a related nickel complex of the same imine ligand and an additional bipyridine ligand, see: Castro et al. (1992 ▶). For the structure of a related palladium complex with a different aromatic substituent, see: Liang et al. (2004 ▶).

Experimental  

Crystal data  

• [Pd(C₁₁H₉N₂)₂]

• M _r = 444.80

• Monoclinic,

• a = 10.5634 (4) Å

• b = 10.6480 (6) Å

• c = 8.0560 (7) Å

• β = 93.044 (2)°

• V = 904.85 (10) ų

• Z = 2

• Mo Kα radiation

• μ = 1.04 mm⁻¹

• T = 183 K

• 0.60 × 0.10 × 0.02 mm

Data collection  

• Nonius KappaCCD diffractometer

• 3903 measured reflections

• 2018 independent reflections

• 1464 reflections with I > 2σ(I)

• R _int = 0.035

Refinement  

• R[F ² > 2σ(F ²)] = 0.032

• wR(F ²) = 0.078

• S = 1.00

• 2018 reflections

• 124 parameters

• H-atom parameters constrained

• Δρ_max = 0.31 e Å⁻³

• Δρ_min = −0.75 e Å⁻³

Data collection: COLLECT (Nonius, 1998 ▶); cell refinement: DENZO (Otwinowski & Minor, 1997 ▶); data reduction: DENZO; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: ORTEP-3 (Farrugia, 2012 ▶); software used to prepare material for publication: publCIF (Westrip, 2010 ▶).

Supplementary Material

Additional supplementary materials: crystallographic information; 3D view; checkCIF report

supplementary crystallographic information

Comment

In the course of a project related to the supramolecular structures of square planar nickel and palladium complexes of pyrrole-2-carbaldehyde based Schiff base ligands in comparison with the structures of the free ligands the molecular structure of the title compound was determined. The free ligands form inversion dimers via N—H···N hydrogen bonds between the pyrrole NH function and the imine nitrogen atom of a neighbouring molecule (Crestani et al., 2011; Gomes et al. 2010).

The molecular structure of the title compound is presented in Fig. 1. The central palladium atom is located on a crystallographic inversion center. The phenyl substituents at the imine nitrogen atoms show a dihedral angle of 75.0 (6)° with respect to the PdN₄ plane. As is expected the bond lengths in the NCCN backbone of the ligand change upon coordination to palladium. The C4–N1 bond in the pyrrole subunit is slightly elongated to 1.389 (3) Å. In addition, C4–C5 bond is shortened to 1.400 (4) Å whereas the imine double bond C5–N2 is elongated to 1.310 (4) Å.

Experimental

N-((1H-Pyrrol-2-yl)methylene)aniline (170 mg, 1 mmol) and [Pd(PPh₃)₄] (580 mg, 0.5 mmol) were dissolved in 20 ml anhydrous toluene under an argon atmosphere. After the solution is stirred at room temperature for 2 h it was filtered through a short bed of celite. Afterwards the solution was concentrated to ca. 10 ml in vacuo. Yellow plate-like crystals of the title compound were obtained from this solution after 1 week at 253 K (Yield: 169 mg, 76%).

Refinement

Hydrogen atoms were included into calculated positions and treated as riding: C-H = 0.95 Å with U_iso(H) = 1.2U_eq(C).

Figures

Fig. 1.

Molecular structure of the title compound with the atom numbering. The displacement ellipsoids are drawn at the 50% probability level (symmetry code: (i) = -x+1, -y+1, -z).

Crystal data

[Pd(C11H9N2)2]	F(000) = 448
Mr = 444.80	Dx = 1.633 Mg m−3
Monoclinic, P21/c	Mo Kα radiation, λ = 0.71073 Å
Hall symbol: -P 2ybc	Cell parameters from 3903 reflections
a = 10.5634 (4) Å	θ = 2.7–27.5°
b = 10.6480 (6) Å	µ = 1.04 mm−1
c = 8.0560 (7) Å	T = 183 K
β = 93.044 (2)°	Plate, yellow
V = 904.85 (10) Å3	0.6 × 0.1 × 0.02 mm
Z = 2

Data collection

Nonius KappaCCD diffractometer	1464 reflections with I > 2σ(I)
Radiation source: fine-focus sealed tube	Rint = 0.035
Graphite monochromator	θmax = 27.5°, θmin = 2.7°
phi–scan, ω–scan	h = −13→13
3903 measured reflections	k = −13→13
2018 independent reflections	l = 0→10

Refinement

Refinement on F2	Primary atom site location: structure-invariant direct methods
Least-squares matrix: full	Secondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.032	Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.078	H-atom parameters constrained
S = 1.00	w = 1/[σ2(Fo2) + (0.0376P)2 + ] where P = (Fo2 + 2Fc2)/3
2018 reflections	(Δ/σ)max < 0.001
124 parameters	Δρmax = 0.31 e Å−3
0 restraints	Δρmin = −0.75 e Å−3

Special details

Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.

Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.

Fractional atomic coordinates and isotropic or equivalent isotropic displacement parameters (Ų)

	x	y	z	Uiso*/Ueq
Pd1	0.5000	0.5000	0.0000	0.02321 (12)
N1	0.6789 (2)	0.5646 (2)	0.0414 (3)	0.0262 (6)
C1	0.7967 (3)	0.5447 (3)	−0.0074 (4)	0.0312 (7)
H1	0.8188	0.4863	−0.0902	0.037*
C2	0.8824 (3)	0.6229 (3)	0.0821 (4)	0.0315 (7)
H2	0.9714	0.6268	0.0707	0.038*
C3	0.8136 (3)	0.6933 (3)	0.1901 (4)	0.0321 (7)
H3	0.8457	0.7552	0.2662	0.038*
C4	0.6880 (3)	0.6555 (3)	0.1652 (3)	0.0285 (7)
C5	0.5768 (3)	0.6762 (3)	0.2483 (3)	0.0299 (7)
H5	0.5744	0.7365	0.3349	0.036*
N2	0.4762 (2)	0.6101 (2)	0.2034 (3)	0.0270 (6)
C6	0.3624 (3)	0.6222 (3)	0.2888 (3)	0.0280 (7)
C7	0.3223 (3)	0.5215 (3)	0.3841 (4)	0.0339 (8)
H7	0.3735	0.4486	0.3975	0.041*
C8	0.2079 (4)	0.5286 (3)	0.4586 (4)	0.0385 (8)
H8	0.1811	0.4606	0.5245	0.046*
C9	0.1314 (3)	0.6348 (3)	0.4379 (4)	0.0395 (8)
H9	0.0511	0.6382	0.4858	0.047*
C10	0.1739 (3)	0.7353 (3)	0.3466 (4)	0.0363 (8)
H10	0.1232	0.8088	0.3350	0.044*
C11	0.2885 (3)	0.7303 (3)	0.2724 (3)	0.0300 (7)
H11	0.3168	0.8000	0.2107	0.036*

Atomic displacement parameters (Ų)

	U11	U22	U33	U12	U13	U23
Pd1	0.02423 (19)	0.02118 (18)	0.02387 (18)	−0.00028 (14)	−0.00192 (12)	−0.00276 (13)
N1	0.0275 (14)	0.0234 (14)	0.0274 (12)	−0.0012 (11)	−0.0018 (11)	0.0008 (10)
C1	0.0302 (18)	0.0304 (15)	0.0328 (16)	0.0010 (14)	−0.0002 (14)	0.0008 (13)
C2	0.0240 (16)	0.0340 (17)	0.0361 (16)	−0.0078 (14)	−0.0021 (14)	0.0057 (13)
C3	0.0318 (18)	0.0316 (18)	0.0319 (16)	−0.0076 (14)	−0.0064 (14)	−0.0004 (13)
C4	0.0356 (18)	0.0226 (15)	0.0268 (14)	−0.0029 (13)	−0.0027 (14)	−0.0022 (12)
C5	0.0338 (18)	0.0272 (16)	0.0283 (15)	−0.0008 (13)	−0.0029 (14)	−0.0042 (12)
N2	0.0290 (14)	0.0246 (13)	0.0271 (13)	0.0011 (11)	−0.0009 (11)	−0.0037 (10)
C6	0.0286 (16)	0.0311 (17)	0.0238 (14)	−0.0030 (13)	−0.0024 (13)	−0.0076 (12)
C7	0.0372 (19)	0.035 (2)	0.0297 (16)	0.0033 (14)	0.0008 (14)	0.0003 (12)
C8	0.045 (2)	0.039 (2)	0.0308 (17)	−0.0062 (15)	0.0028 (16)	0.0030 (13)
C9	0.0298 (18)	0.055 (2)	0.0340 (16)	−0.0047 (16)	0.0056 (14)	−0.0123 (15)
C10	0.0348 (19)	0.039 (2)	0.0351 (17)	0.0095 (15)	−0.0014 (15)	−0.0080 (14)
C11	0.0339 (18)	0.0276 (17)	0.0281 (15)	0.0026 (14)	−0.0020 (14)	−0.0035 (12)

Geometric parameters (Å, º)

Pd1—N1	2.022 (2)	C5—H5	0.9500
Pd1—N1i	2.022 (2)	N2—C6	1.422 (4)
Pd1—N2	2.041 (2)	C6—C11	1.393 (4)
Pd1—N2i	2.041 (2)	C6—C7	1.398 (4)
N1—C1	1.342 (4)	C7—C8	1.379 (5)
N1—C4	1.389 (3)	C7—H7	0.9500
C1—C2	1.401 (4)	C8—C9	1.395 (5)
C1—H1	0.9500	C8—H8	0.9500
C2—C3	1.384 (4)	C9—C10	1.387 (5)
C2—H2	0.9500	C9—H9	0.9500
C3—C4	1.391 (4)	C10—C11	1.379 (4)
C3—H3	0.9500	C10—H10	0.9500
C4—C5	1.400 (4)	C11—H11	0.9500
C5—N2	1.310 (4)
N1—Pd1—N1i	180.0	C4—C5—H5	120.9
N1—Pd1—N2	80.00 (9)	C5—N2—C6	120.8 (2)
N1i—Pd1—N2	100.00 (9)	C5—N2—Pd1	113.4 (2)
N1—Pd1—N2i	100.00 (9)	C6—N2—Pd1	125.75 (18)
N1i—Pd1—N2i	80.00 (9)	C11—C6—C7	120.1 (3)
N2—Pd1—N2i	180.0	C11—C6—N2	120.9 (3)
C1—N1—C4	106.9 (3)	C7—C6—N2	119.0 (3)
C1—N1—Pd1	140.5 (2)	C8—C7—C6	119.7 (3)
C4—N1—Pd1	112.6 (2)	C8—C7—H7	120.1
N1—C1—C2	109.8 (3)	C6—C7—H7	120.1
N1—C1—H1	125.1	C9—C8—C7	120.5 (3)
C2—C1—H1	125.1	C9—C8—H8	119.7
C3—C2—C1	107.4 (3)	C7—C8—H8	119.7
C3—C2—H2	126.3	C10—C9—C8	119.1 (3)
C1—C2—H2	126.3	C10—C9—H9	120.4
C2—C3—C4	106.3 (3)	C8—C9—H9	120.4
C2—C3—H3	126.8	C9—C10—C11	121.1 (3)
C4—C3—H3	126.8	C9—C10—H10	119.4
N1—C4—C3	109.5 (3)	C11—C10—H10	119.4
N1—C4—C5	115.2 (3)	C6—C11—C10	119.4 (3)
C3—C4—C5	134.7 (3)	C6—C11—H11	120.3
N2—C5—C4	118.2 (3)	C10—C11—H11	120.3
N2—C5—H5	120.9

Symmetry code: (i) −x+1, −y+1, −z.