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Acta Crystallographica Section E: Structure Reports Online logoLink to Acta Crystallographica Section E: Structure Reports Online
. 2012 Nov 3;68(Pt 12):o3272–o3273. doi: 10.1107/S1600536812044650

[3-Benzoyl-2,4-bis­(3-nitro­phen­yl)cyclo­but­yl](phen­yl)methanone

Prakash S Nayak a, Badiadka Narayana a, Hemmige S Yathirajan b, Thomas Gerber c, Eric Hosten c, Richard Betz c,*
PMCID: PMC3588821  PMID: 23468786

Abstract

The asymmetric unit of the title compound, C30H22N2O6, comprises a half-mol­ecule of the cyclo­butane derivative. The least-squares planes defined by the respective C atoms of the aromatic substituents inter­sect at angles of 76.81 (7) and 89.22 (8)° with the least-squares plane defined by the C atoms of the cyclo­butane ring. In the crystal, C—H⋯O contacts connect the mol­ecules into a three-dimensional network. The shortest centroid–centroid distance between the two different aromatic rings is 3.9601 (8) Å.

Related literature  

For the biological activity of chalcones and cyclo­butane-derived compounds, see: Dimmock et al. (1999); Marais et al. (2005); Katerere et al. (2004); Seidel et al. (2000). For the crystal structures of similar compounds, see: Zheng et al. (2001); Zhuang & Zheng (2002). For general information about the dimerization of chalcones, see: Stobbe & Bremer (1929); Mustafa (1952). For puckering analysis of cyclic motifs, see: Cremer & Pople (1975). For graph-set analysis of hydrogen bonds, see: Etter et al. (1990); Bernstein et al. (1995).graphic file with name e-68-o3272-scheme1.jpg

Experimental  

Crystal data  

  • C30H22N2O6

  • M r = 506.50

  • Monoclinic, Inline graphic

  • a = 5.7850 (1) Å

  • b = 14.7824 (3) Å

  • c = 14.3589 (3) Å

  • β = 104.858 (1)°

  • V = 1186.86 (4) Å3

  • Z = 2

  • Mo Kα radiation

  • μ = 0.10 mm−1

  • T = 200 K

  • 0.33 × 0.14 × 0.11 mm

Data collection  

  • Bruker APEXII CCD diffractometer

  • Absorption correction: multi-scan (SADABS; Bruker, 2008) T min = 0.968, T max = 0.989

  • 11005 measured reflections

  • 2945 independent reflections

  • 2387 reflections with I > 2σ(I)

  • R int = 0.020

Refinement  

  • R[F 2 > 2σ(F 2)] = 0.040

  • wR(F 2) = 0.111

  • S = 1.03

  • 2945 reflections

  • 172 parameters

  • H-atom parameters constrained

  • Δρmax = 0.32 e Å−3

  • Δρmin = −0.22 e Å−3

Data collection: APEX2 (Bruker, 2010); cell refinement: SAINT (Bruker, 2010); data reduction: SAINT; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008); molecular graphics: ORTEP-3 (Farrugia, 2012) and Mercury (Macrae et al., 2008); software used to prepare material for publication: SHELXL97 and PLATON (Spek, 2009).

Supplementary Material

Crystal structure: contains datablock(s) I, global. DOI: 10.1107/S1600536812044650/fj2603sup1.cif

e-68-o3272-sup1.cif (21.1KB, cif)

Supplementary material file. DOI: 10.1107/S1600536812044650/fj2603Isup2.cdx

Structure factors: contains datablock(s) I. DOI: 10.1107/S1600536812044650/fj2603Isup3.hkl

e-68-o3272-Isup3.hkl (144.6KB, hkl)

Supplementary material file. DOI: 10.1107/S1600536812044650/fj2603Isup4.cml

Additional supplementary materials: crystallographic information; 3D view; checkCIF report

Table 1. Hydrogen-bond geometry (Å, °).

D—H⋯A D—H H⋯A DA D—H⋯A
C3—H3⋯O1i 1.00 2.56 3.3957 (15) 141
C14—H14⋯O2ii 0.95 2.56 3.3666 (19) 142
C2—H2⋯O3iii 1.00 2.61 3.5009 (17) 148

Symmetry codes: (i) Inline graphic; (ii) Inline graphic; (iii) Inline graphic.

Acknowledgments

BN thanks the UGC for financial assistance through a BSR one-time grant for the purchase of chemicals. PSN thanks Mangalore University for research facilities and the DST–PURSE for financial assistance.

supplementary crystallographic information

Comment

Chalcones comprise one of the most commonly occurring classes of medicinally important natural compounds, since they show various biological activities (Dimmock et al., 1999; Marais et al.,. 2005). Cyclobutane-containing natural products have, e.g., been reported for Combretum albopunctatum (Katerere et al., 2004) and Goniothalamus thwaitesii (Seidel et al. 2000). Because of the various biological activities of these natural compounds, the synthesis of cyclobutane-derived compounds is one of the most intensively studied photochemical reactions of chalcone derivatives. These reactions can be carried out in solution, solid state and molten state by sunlight or UV-vis irradiation, with variable results in terms of yield and product composition (Stobbe & Bremer, 1929; Mustafa, 1952). The crystal structures of some dimerized chalcones such as r-1,c-2,t-3,t-4- 1,3-bis(4-methoxyphenyl)-2,4-bis(5-phenyl-1,3,4-oxadiazol-2-yl) cyclobutane 1,4-dioxane solvate (Zheng et al., 2001) and r-1,c-2,t- 3,t-4–1,2-bis(4-methoxyphenyl)-3,4-bis(5-phenyl-1,3,4-oxadiazol-2-yl) cyclobutane (Zhuang & Zheng, 2002) have been reported. In view of the pharmacological importance of chalcone derivatives, the synthesis of such a compound was attempted. Upon the determination of the reaction product's crystal structure, the unintentional formation of the corresponding dimer in the wake of the reaction sequence was revealed.

The title compound, [3-benzoyl-2,4-bis(3-nitrophenyl)cyclobutyl](phenyl)methanone, features a central cyclobutane moiety that bears one aromatic substituent on each carbon atom. Due to the centrosymmetry of the molecule, the relative orientation of these substituents corresponds to cis-trans-cis-trans. The small puckering amplitude precludes a puckering analysis of this ring (Cremer & Pople, 1975). The least-squares planes defined by the respective carbon atoms of the aromatic substituents intersect with the least-squares plane defined the carbon atoms of the cyclobutane ring at angles of 76.81 (7) ° and 89.22 (8) °. The aforementioned planes of the two different aromatic moieties in the asymmetric unit enclose an angle of 24.09 (6) ° (Fig. 1).

In the crystal, intermolecular C–H···O contacts whose range falls by more than 0.1 Å below the sum of van-der-Waals radii of the respective atoms can be observed. These are supported by the hydrogen atom in para position of the non-substituted phenyl group as well as all methine-type hydrogen atoms while the hydrogen atoms of the nitrophenyl moiety do not take part in such contacts. All oxygen atoms present in the molecule act as acceptors. Furthermore, one intramolecular C–H···O contact between a carbonyl group and a methine-type hydrogen atom is apparent. In total, the molecules are connected to a three-dimensional network. In terms of graph-set analysis (Etter et al., 1990; Bernstein et al., 1995), the descriptor for these contacts is S(5)C11(8)C11(13)R22(10) on the unary level. Metrical parameters as well as information about the symmetry of these contacts are summarized in Table 1. The shortest intercentroid distance between two aromatic systems was measured at 3.9601 (8) Å and is apparent between the two different aromatic substituents (Fig. 2).

The packing of the title compound in the crystal structure is shown in Figure 3.

Experimental

To a mixture of 3-nitrobenzaldehyde (1.51 g, 0.01 mol) and acetophenone (1.16 ml, 0.01 mol) in ethanol (50 ml), a sodium hydroxide solution (10%, 10 ml) was added. The mixture was stirred at 278–283 K for 3 h. The precipitate formed was collected by filtration and purified by recrystallization from ethanol. Single crystals suitable for the X-ray diffraction study were grown from methanol by slow evaporation at room temperature. The synthesized chalcone was dimerized during crystallization.

Refinement

Carbon-bound H atoms were placed in calculated positions (C—H 0.95 Å for aromatic carbon atoms and C—H 1.00 Å for methine groups) and were included in the refinement in the riding model approximation, with U(H) set to 1.2Ueq(C).

Figures

Fig. 1.

Fig. 1.

The molecular structure of the title compound, with atom labels and anisotropic displacement ellipsoids (drawn at 50% probability level). Symmetry operator: i -x + 1, -y, -z + 1.

Fig. 2.

Fig. 2.

Intermolecular contacts, viewed along [-1 0 0]. For clarity, only a selection of contacts is depicted. Symmetry operators: ix, y, z - 1; iix, y, z + 1.

Fig. 3.

Fig. 3.

Molecular packing of the title compound, viewed along [-1 0 0] (anisotropic displacement ellipsoids drawn at 50% probability level).

Crystal data

C30H22N2O6 F(000) = 528
Mr = 506.50 Dx = 1.417 Mg m3
Monoclinic, P21/c Melting point > 523 K
Hall symbol: -P 2ybc Mo Kα radiation, λ = 0.71073 Å
a = 5.7850 (1) Å Cell parameters from 4849 reflections
b = 14.7824 (3) Å θ = 2.8–28.3°
c = 14.3589 (3) Å µ = 0.10 mm1
β = 104.858 (1)° T = 200 K
V = 1186.86 (4) Å3 Block, colourless
Z = 2 0.33 × 0.14 × 0.11 mm

Data collection

Bruker APEXII CCD diffractometer 2945 independent reflections
Radiation source: fine-focus sealed tube 2387 reflections with I > 2σ(I)
Graphite monochromator Rint = 0.020
φ and ω scans θmax = 28.5°, θmin = 2.8°
Absorption correction: multi-scan (SADABS; Bruker, 2008) h = −7→7
Tmin = 0.968, Tmax = 0.989 k = −17→19
11005 measured reflections l = −17→19

Refinement

Refinement on F2 Primary atom site location: structure-invariant direct methods
Least-squares matrix: full Secondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.040 Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.111 H-atom parameters constrained
S = 1.03 w = 1/[σ2(Fo2) + (0.055P)2 + 0.3935P] where P = (Fo2 + 2Fc2)/3
2945 reflections (Δ/σ)max < 0.001
172 parameters Δρmax = 0.32 e Å3
0 restraints Δρmin = −0.22 e Å3

Fractional atomic coordinates and isotropic or equivalent isotropic displacement parameters (Å2)

x y z Uiso*/Ueq
O1 0.02716 (16) 0.08341 (7) 0.41101 (7) 0.0343 (2)
O2 0.4112 (3) 0.11125 (12) 0.89447 (9) 0.0693 (4)
O3 0.6594 (3) 0.21980 (8) 0.94461 (8) 0.0584 (4)
N1 0.5674 (2) 0.16321 (9) 0.88471 (8) 0.0386 (3)
C1 0.2098 (2) 0.07918 (8) 0.38436 (8) 0.0223 (2)
C2 0.4494 (2) 0.05901 (8) 0.45303 (8) 0.0206 (2)
H2 0.5684 0.1074 0.4506 0.025*
C3 0.44539 (19) 0.03813 (8) 0.55776 (8) 0.0203 (2)
H3 0.2767 0.0331 0.5629 0.024*
C11 0.2032 (2) 0.09061 (8) 0.28021 (8) 0.0224 (2)
C12 0.3971 (2) 0.12395 (9) 0.24994 (9) 0.0266 (3)
H12 0.5414 0.1391 0.2960 0.032*
C13 0.3792 (2) 0.13495 (10) 0.15237 (9) 0.0333 (3)
H13 0.5096 0.1596 0.1318 0.040*
C14 0.1718 (3) 0.11009 (11) 0.08487 (10) 0.0371 (3)
H14 0.1607 0.1173 0.0181 0.045*
C15 −0.0192 (2) 0.07487 (10) 0.11440 (9) 0.0358 (3)
H15 −0.1599 0.0565 0.0680 0.043*
C16 −0.0049 (2) 0.06645 (9) 0.21178 (9) 0.0287 (3)
H16 −0.1381 0.0440 0.2320 0.034*
C21 0.5883 (2) 0.09762 (8) 0.63665 (8) 0.0209 (2)
C22 0.5151 (2) 0.10549 (8) 0.72138 (8) 0.0245 (2)
H22 0.3736 0.0762 0.7275 0.029*
C23 0.6502 (2) 0.15632 (8) 0.79654 (9) 0.0276 (3)
C24 0.8559 (2) 0.20118 (9) 0.79156 (9) 0.0319 (3)
H24 0.9447 0.2362 0.8441 0.038*
C25 0.9279 (2) 0.19330 (9) 0.70728 (10) 0.0307 (3)
H25 1.0684 0.2235 0.7015 0.037*
C26 0.7973 (2) 0.14165 (8) 0.63095 (9) 0.0254 (2)
H26 0.8512 0.1363 0.5740 0.030*

Atomic displacement parameters (Å2)

U11 U22 U33 U12 U13 U23
O1 0.0268 (4) 0.0478 (6) 0.0298 (5) 0.0065 (4) 0.0101 (4) 0.0091 (4)
O2 0.0738 (9) 0.1032 (12) 0.0425 (7) −0.0292 (8) 0.0360 (6) −0.0212 (7)
O3 0.1001 (10) 0.0466 (7) 0.0285 (5) −0.0007 (7) 0.0169 (6) −0.0144 (5)
N1 0.0505 (7) 0.0419 (7) 0.0239 (5) 0.0073 (6) 0.0106 (5) −0.0050 (5)
C1 0.0250 (5) 0.0196 (5) 0.0222 (5) 0.0009 (4) 0.0059 (4) 0.0023 (4)
C2 0.0227 (5) 0.0199 (5) 0.0194 (5) −0.0018 (4) 0.0059 (4) 0.0002 (4)
C3 0.0206 (5) 0.0219 (5) 0.0185 (5) −0.0005 (4) 0.0056 (4) 0.0006 (4)
C11 0.0246 (5) 0.0210 (5) 0.0214 (5) 0.0035 (4) 0.0055 (4) 0.0027 (4)
C12 0.0244 (6) 0.0290 (6) 0.0265 (6) 0.0013 (5) 0.0064 (4) 0.0031 (5)
C13 0.0318 (6) 0.0419 (7) 0.0296 (6) 0.0041 (6) 0.0144 (5) 0.0068 (6)
C14 0.0405 (7) 0.0497 (8) 0.0218 (6) 0.0089 (6) 0.0091 (5) 0.0023 (6)
C15 0.0335 (7) 0.0455 (8) 0.0248 (6) 0.0003 (6) 0.0007 (5) −0.0029 (6)
C16 0.0258 (6) 0.0320 (6) 0.0276 (6) −0.0006 (5) 0.0052 (5) 0.0021 (5)
C21 0.0237 (5) 0.0190 (5) 0.0197 (5) 0.0025 (4) 0.0050 (4) 0.0000 (4)
C22 0.0267 (6) 0.0241 (6) 0.0237 (5) 0.0019 (4) 0.0085 (4) 0.0000 (4)
C23 0.0355 (6) 0.0259 (6) 0.0213 (6) 0.0055 (5) 0.0073 (5) −0.0017 (5)
C24 0.0373 (7) 0.0256 (6) 0.0280 (6) −0.0008 (5) −0.0004 (5) −0.0050 (5)
C25 0.0284 (6) 0.0266 (6) 0.0354 (7) −0.0052 (5) 0.0050 (5) −0.0005 (5)
C26 0.0263 (6) 0.0244 (6) 0.0260 (6) −0.0003 (4) 0.0076 (4) 0.0009 (5)

Geometric parameters (Å, º)

O1—C1 1.2141 (15) C13—H13 0.9500
O2—N1 1.2210 (19) C14—C15 1.383 (2)
O3—N1 1.2199 (16) C14—H14 0.9500
N1—C23 1.4676 (17) C15—C16 1.3850 (18)
C1—C11 1.4957 (16) C15—H15 0.9500
C1—C2 1.5104 (15) C16—H16 0.9500
C2—C3 1.5412 (15) C21—C22 1.3917 (16)
C2—C3i 1.5827 (16) C21—C26 1.3938 (17)
C2—H2 1.0000 C22—C23 1.3810 (17)
C3—C21 1.5032 (15) C22—H22 0.9500
C3—C2i 1.5827 (16) C23—C24 1.380 (2)
C3—H3 1.0000 C24—C25 1.382 (2)
C11—C16 1.3910 (16) C24—H24 0.9500
C11—C12 1.3931 (17) C25—C26 1.3895 (17)
C12—C13 1.3877 (17) C25—H25 0.9500
C12—H12 0.9500 C26—H26 0.9500
C13—C14 1.385 (2)
O3—N1—O2 123.53 (13) C15—C14—C13 120.16 (12)
O3—N1—C23 118.42 (13) C15—C14—H14 119.9
O2—N1—C23 118.05 (12) C13—C14—H14 119.9
O1—C1—C11 120.53 (10) C14—C15—C16 119.85 (12)
O1—C1—C2 122.11 (10) C14—C15—H15 120.1
C11—C1—C2 117.32 (10) C16—C15—H15 120.1
C1—C2—C3 115.82 (9) C15—C16—C11 120.46 (12)
C1—C2—C3i 115.26 (9) C15—C16—H16 119.8
C3—C2—C3i 90.93 (8) C11—C16—H16 119.8
C1—C2—H2 111.1 C22—C21—C26 118.37 (10)
C3—C2—H2 111.1 C22—C21—C3 118.42 (10)
C3i—C2—H2 111.1 C26—C21—C3 123.13 (10)
C21—C3—C2 118.37 (9) C23—C22—C21 119.39 (12)
C21—C3—C2i 116.97 (9) C23—C22—H22 120.3
C2—C3—C2i 89.07 (8) C21—C22—H22 120.3
C21—C3—H3 110.3 C24—C23—C22 122.92 (12)
C2—C3—H3 110.3 C24—C23—N1 119.20 (11)
C2i—C3—H3 110.3 C22—C23—N1 117.87 (12)
C16—C11—C12 119.38 (11) C23—C24—C25 117.54 (11)
C16—C11—C1 118.23 (11) C23—C24—H24 121.2
C12—C11—C1 122.39 (10) C25—C24—H24 121.2
C13—C12—C11 119.94 (11) C24—C25—C26 120.79 (12)
C13—C12—H12 120.0 C24—C25—H25 119.6
C11—C12—H12 120.0 C26—C25—H25 119.6
C14—C13—C12 120.16 (12) C25—C26—C21 120.99 (11)
C14—C13—H13 119.9 C25—C26—H26 119.5
C12—C13—H13 119.9 C21—C26—H26 119.5
O1—C1—C2—C3 3.75 (16) C1—C11—C16—C15 −179.34 (12)
C11—C1—C2—C3 −174.02 (9) C2—C3—C21—C22 153.77 (10)
O1—C1—C2—C3i 108.12 (13) C2i—C3—C21—C22 −101.51 (12)
C11—C1—C2—C3i −69.65 (13) C2—C3—C21—C26 −29.57 (16)
C1—C2—C3—C21 −120.73 (11) C2i—C3—C21—C26 75.16 (14)
C3i—C2—C3—C21 120.45 (11) C26—C21—C22—C23 0.10 (17)
C1—C2—C3—C2i 118.82 (11) C3—C21—C22—C23 176.93 (11)
C3i—C2—C3—C2i 0.0 C21—C22—C23—C24 0.70 (19)
O1—C1—C11—C16 −28.05 (17) C21—C22—C23—N1 179.91 (11)
C2—C1—C11—C16 149.76 (11) O3—N1—C23—C24 11.86 (19)
O1—C1—C11—C12 152.23 (12) O2—N1—C23—C24 −167.48 (14)
C2—C1—C11—C12 −29.96 (16) O3—N1—C23—C22 −167.39 (13)
C16—C11—C12—C13 1.65 (18) O2—N1—C23—C22 13.3 (2)
C1—C11—C12—C13 −178.63 (12) C22—C23—C24—C25 −0.62 (19)
C11—C12—C13—C14 −2.1 (2) N1—C23—C24—C25 −179.82 (12)
C12—C13—C14—C15 0.5 (2) C23—C24—C25—C26 −0.24 (19)
C13—C14—C15—C16 1.5 (2) C24—C25—C26—C21 1.03 (19)
C14—C15—C16—C11 −2.0 (2) C22—C21—C26—C25 −0.94 (18)
C12—C11—C16—C15 0.39 (19) C3—C21—C26—C25 −177.61 (11)

Symmetry code: (i) −x+1, −y, −z+1.

Hydrogen-bond geometry (Å, º)

D—H···A D—H H···A D···A D—H···A
C3—H3···O1 1.00 2.40 2.8509 (14) 106
C3—H3···O1ii 1.00 2.56 3.3957 (15) 141
C14—H14···O2iii 0.95 2.56 3.3666 (19) 142
C2—H2···O3iv 1.00 2.61 3.5009 (17) 148

Symmetry codes: (ii) −x, −y, −z+1; (iii) x, y, z−1; (iv) x, −y+1/2, z−1/2.

Footnotes

Supplementary data and figures for this paper are available from the IUCr electronic archives (Reference: FJ2603).

References

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Associated Data

This section collects any data citations, data availability statements, or supplementary materials included in this article.

Supplementary Materials

Crystal structure: contains datablock(s) I, global. DOI: 10.1107/S1600536812044650/fj2603sup1.cif

e-68-o3272-sup1.cif (21.1KB, cif)

Supplementary material file. DOI: 10.1107/S1600536812044650/fj2603Isup2.cdx

Structure factors: contains datablock(s) I. DOI: 10.1107/S1600536812044650/fj2603Isup3.hkl

e-68-o3272-Isup3.hkl (144.6KB, hkl)

Supplementary material file. DOI: 10.1107/S1600536812044650/fj2603Isup4.cml

Additional supplementary materials: crystallographic information; 3D view; checkCIF report


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