Abstract
In the title hydrate, C13H11N3O·H2O, the benzotriazole ring system is planar (r.m.s. deviation = 0.007 Å) and is almost orthogonal to the phenyl ring to which it is linked by a methylene group, forming a dihedral angle of 81.87 (15)°. In the crystal, molecules are linked into chains along [001] by O—H⋯O hydrogen bonds. The chains are consolidated into a three-dimensional architecture by C—H⋯O, C—H⋯π and π–π [centroid–centroid distance between the five- and six-membered rings of the benzotriazole ring system = 3.595 (3) Å] interactions.
Related literature
For the biological activity of benzotriazole derivatives, see: Kopańska et al. (2005 ▶); Sarala et al. (2007 ▶). For their applications, see: Kopec et al. (2008 ▶); Krawczyk & Gdaniec (2005 ▶); Smith et al. (2001 ▶); Sha et al. (1996 ▶). For a related structure, see: Selvarathy Grace et al. (2012 ▶).
Experimental
Crystal data
C13H11N3O·H2O
M r = 243.26
Orthorhombic,
a = 12.556 (5) Å
b = 20.881 (8) Å
c = 4.6651 (18) Å
V = 1223.1 (8) Å3
Z = 4
Mo Kα radiation
μ = 0.09 mm−1
T = 173 K
0.40 × 0.05 × 0.04 mm
Data collection
Bruker SMART APEXII diffractometer
15911 measured reflections
1677 independent reflections
1118 reflections with I > 2σ(I)
R int = 0.132
Refinement
R[F 2 > 2σ(F 2)] = 0.052
wR(F 2) = 0.140
S = 0.98
1677 reflections
164 parameters
1 restraint
H-atom parameters constrained
Δρmax = 0.19 e Å−3
Δρmin = −0.24 e Å−3
Data collection: APEX2 (Bruker, 2008 ▶); cell refinement: SAINT (Bruker, 2008 ▶); data reduction: SAINT; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: SHELXTL (Sheldrick, 2008 ▶); software used to prepare material for publication: PLATON (Spek, 2009 ▶).
Supplementary Material
Crystal structure: contains datablock(s) global, I. DOI: 10.1107/S1600536812044868/tk5165sup1.cif
Structure factors: contains datablock(s) I. DOI: 10.1107/S1600536812044868/tk5165Isup2.hkl
Supplementary material file. DOI: 10.1107/S1600536812044868/tk5165Isup3.cml
Additional supplementary materials: crystallographic information; 3D view; checkCIF report
Table 1. Hydrogen-bond geometry (Å, °).
Cg1 is the centroid of the C11–C16 phenyl ring.
| D—H⋯A | D—H | H⋯A | D⋯A | D—H⋯A |
|---|---|---|---|---|
| O1W—H1W⋯O1W i | 0.82 | 1.93 | 2.744 (3) | 169 |
| O1W—H2W⋯O17 | 0.85 | 1.95 | 2.800 (3) | 180 |
| C10—H10A⋯O17ii | 0.99 | 2.45 | 3.400 (5) | 161 |
| C10—H10B⋯Cg3iii | 0.99 | 2.51 | 3.382 (4) | 147 |
Symmetry codes: (i)
; (ii)
; (iii)
.
supplementary crystallographic information
Comment
Benzotriazole derivatives show biological activities such as anti-inflammatory, diuretic, anti-viral and anti-hypertensive (Kopańska et al., 2005; Sarala et al., 2007). They have been used as a corrosion inhibitor, anti-freeze agent, ultraviolet light stabilizer for plastics and as an anti-foggant in photography (Krawczyk & Gdaniec, 2005; Smith et al., 2001). N-aryloxy derivatives of benzotriazole have anti-mycobacterial activity (Kopec et al., 2008). Benzotriazole possessing three vicinal N atoms, is used as an anti-fouling and anti-wear reagent (Sha et al., 1996). Due to the above mentioned applications of benzotriazole, we have systematically synthesised and investigated the structures of novel benzotriazole derivatives. We have already reported the crystal structure of 1-(benzyl)-1H-benzotriazole (Selvarathy Grace et al., 2012). Here, we report the crystal structure of the title compound (I).
The benzotriazole ring in (I), Fig 1, is essentially planar with the maximum deviation from planarity being 0.010 (3) Å for atom N3. The mean plane of the benzotriazole ring (N1–N3,C4–C9) forms a dihedral angle of 81.87 (15) Å with the mean plane of the phenyl ring (C11–C16).
The molecules are linked into a one dimensional chain along [001] by O—H···O hydrogen bonds, Table 1 and Fig. 2. The crystal packing is stabilized by π–π stacking interactions with the centroid-centroid distance of 3.595 (3) Å [symmetry code: x, y, -1+z], together with C—H···O and C—H···π interactions, Table 1.
Experimental
A mixture of sodium salt of 1-hydroxyl benzotriazole (0.157 g, 1 mmol) and benzyl chloride (0.126 g, 1 mmol) in a mixture comprising ethanol, water and sodium ethoxide (10 ml) were heated at 333 K with continuous stirring for 6 h. The mixture was kept aside for slow evaporation. After a week, crystals suitable for X-ray diffraction were obtained.
Refinement
H atoms were positioned geometrically [C—H = 0.95 (aromatic) or 0.99 Å (methylene); O—H= 0.82–0.85 Å] and refined using a riding model, with Uiso(H) = 1.2-1.5Ueq(C,O).
Figures
Fig. 1.
The asymmetric unit of the title compound, showing the atomic numbering scheme. Displacement ellipsoids are drawn at the 50% probability level.
Fig. 2.
The crystal packing of the title compound, highlighting the one-dimensional chains along [001]. Hydrogen bonds are shown as dashed lines.
Crystal data
| C13H11N3O·H2O | F(000) = 512 |
| Mr = 243.26 | Dx = 1.321 Mg m−3 |
| Orthorhombic, Pna21 | Mo Kα radiation, λ = 0.71073 Å |
| Hall symbol: P 2c -2n | Cell parameters from 1403 reflections |
| a = 12.556 (5) Å | θ = 2.5–20.2° |
| b = 20.881 (8) Å | µ = 0.09 mm−1 |
| c = 4.6651 (18) Å | T = 173 K |
| V = 1223.1 (8) Å3 | Needle, colourless |
| Z = 4 | 0.40 × 0.05 × 0.04 mm |
Data collection
| Bruker SMART APEXII diffractometer | 1118 reflections with I > 2σ(I) |
| Radiation source: sealed tube | Rint = 0.132 |
| Graphite monochromator | θmax = 28.2°, θmin = 1.9° |
| CCD scan | h = −16→16 |
| 15911 measured reflections | k = −27→27 |
| 1677 independent reflections | l = −6→6 |
Refinement
| Refinement on F2 | Secondary atom site location: difference Fourier map |
| Least-squares matrix: full | Hydrogen site location: inferred from neighbouring sites |
| R[F2 > 2σ(F2)] = 0.052 | H-atom parameters constrained |
| wR(F2) = 0.140 | w = 1/[σ2(Fo2) + (0.0825P)2] where P = (Fo2 + 2Fc2)/3 |
| S = 0.98 | (Δ/σ)max < 0.001 |
| 1677 reflections | Δρmax = 0.19 e Å−3 |
| 164 parameters | Δρmin = −0.24 e Å−3 |
| 1 restraint | Extinction correction: SHELXL97 (Sheldrick, 2008), Fc*=kFc[1+0.001xFc2λ3/sin(2θ)]-1/4 |
| Primary atom site location: structure-invariant direct methods | Extinction coefficient: 0.038 (6) |
Special details
| Geometry. All esds (except the esd in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell esds are taken into account individually in the estimation of esds in distances, angles and torsion angles; correlations between esds in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell esds is used for estimating esds involving l.s. planes. |
| Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > 2sigma(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger. |
Fractional atomic coordinates and isotropic or equivalent isotropic displacement parameters (Å2)
| x | y | z | Uiso*/Ueq | ||
| N1 | 0.3160 (2) | 0.27237 (12) | 0.6604 (7) | 0.0335 (7) | |
| N2 | 0.4106 (2) | 0.25008 (13) | 0.5616 (7) | 0.0372 (7) | |
| N3 | 0.4253 (2) | 0.19473 (13) | 0.6976 (8) | 0.0389 (8) | |
| C4 | 0.3429 (3) | 0.18041 (15) | 0.8807 (9) | 0.0343 (8) | |
| C5 | 0.3241 (3) | 0.12821 (16) | 1.0631 (10) | 0.0455 (10) | |
| H5 | 0.3720 | 0.0931 | 1.0769 | 0.055* | |
| C6 | 0.2315 (3) | 0.13125 (18) | 1.2207 (10) | 0.0524 (11) | |
| H6 | 0.2153 | 0.0974 | 1.3495 | 0.063* | |
| C7 | 0.1594 (3) | 0.18339 (18) | 1.1969 (10) | 0.0464 (9) | |
| H7 | 0.0962 | 0.1829 | 1.3089 | 0.056* | |
| C8 | 0.1776 (3) | 0.23429 (16) | 1.0183 (8) | 0.0380 (9) | |
| H8 | 0.1293 | 0.2692 | 1.0038 | 0.046* | |
| C9 | 0.2720 (3) | 0.23174 (14) | 0.8583 (8) | 0.0301 (8) | |
| C10 | 0.2800 (3) | 0.33671 (14) | 0.5809 (9) | 0.0344 (8) | |
| H10A | 0.2019 | 0.3360 | 0.5514 | 0.041* | |
| H10B | 0.3137 | 0.3492 | 0.3974 | 0.041* | |
| C11 | 0.3069 (3) | 0.38601 (15) | 0.8068 (8) | 0.0310 (8) | |
| C12 | 0.2259 (3) | 0.42481 (15) | 0.9188 (9) | 0.0364 (8) | |
| H12 | 0.1545 | 0.4193 | 0.8558 | 0.044* | |
| C13 | 0.2499 (3) | 0.47148 (15) | 1.1226 (9) | 0.0419 (9) | |
| H13 | 0.1948 | 0.4979 | 1.1972 | 0.050* | |
| C14 | 0.3532 (3) | 0.47944 (16) | 1.2161 (10) | 0.0423 (9) | |
| H14 | 0.3693 | 0.5115 | 1.3539 | 0.051* | |
| C15 | 0.4335 (3) | 0.44073 (16) | 1.1095 (9) | 0.0396 (9) | |
| H15 | 0.5044 | 0.4458 | 1.1767 | 0.048* | |
| C16 | 0.4107 (3) | 0.39448 (16) | 0.9047 (9) | 0.0377 (8) | |
| H16 | 0.4663 | 0.3684 | 0.8308 | 0.045* | |
| O17 | 0.51045 (19) | 0.16046 (12) | 0.6496 (9) | 0.0576 (10) | |
| O1W | 0.4934 (2) | 0.03436 (11) | 0.4506 (7) | 0.0472 (7) | |
| H1W | 0.4943 | 0.0098 | 0.5883 | 0.071* | |
| H2W | 0.4986 | 0.0728 | 0.5103 | 0.071* |
Atomic displacement parameters (Å2)
| U11 | U22 | U33 | U12 | U13 | U23 | |
| N1 | 0.0399 (15) | 0.0262 (13) | 0.0344 (17) | 0.0007 (12) | −0.0016 (14) | 0.0040 (13) |
| N2 | 0.0383 (15) | 0.0306 (13) | 0.0426 (18) | 0.0002 (13) | 0.0004 (15) | −0.0061 (14) |
| N3 | 0.0389 (15) | 0.0276 (13) | 0.0503 (19) | 0.0033 (12) | −0.0076 (16) | −0.0087 (15) |
| C4 | 0.0400 (18) | 0.0240 (15) | 0.039 (2) | −0.0013 (14) | −0.0091 (18) | −0.0034 (16) |
| C5 | 0.063 (2) | 0.0263 (16) | 0.048 (2) | −0.0027 (17) | −0.021 (2) | 0.0027 (18) |
| C6 | 0.080 (3) | 0.034 (2) | 0.043 (2) | −0.017 (2) | −0.018 (3) | 0.0126 (19) |
| C7 | 0.056 (2) | 0.043 (2) | 0.039 (2) | −0.0120 (17) | −0.003 (2) | 0.008 (2) |
| C8 | 0.044 (2) | 0.0316 (18) | 0.038 (2) | −0.0022 (15) | −0.0036 (18) | 0.0001 (16) |
| C9 | 0.0396 (18) | 0.0241 (14) | 0.0268 (19) | −0.0015 (13) | −0.0043 (16) | 0.0025 (14) |
| C10 | 0.045 (2) | 0.0259 (15) | 0.0321 (19) | 0.0012 (14) | −0.0032 (17) | 0.0053 (15) |
| C11 | 0.0410 (18) | 0.0214 (14) | 0.0304 (18) | −0.0046 (14) | −0.0022 (16) | 0.0067 (14) |
| C12 | 0.0353 (17) | 0.0297 (15) | 0.044 (2) | 0.0020 (14) | −0.0066 (18) | 0.0010 (17) |
| C13 | 0.0461 (19) | 0.0287 (16) | 0.051 (3) | 0.0061 (15) | −0.005 (2) | −0.0025 (18) |
| C14 | 0.056 (2) | 0.0299 (16) | 0.041 (2) | −0.0108 (16) | −0.001 (2) | −0.0005 (18) |
| C15 | 0.0401 (19) | 0.0376 (17) | 0.041 (2) | −0.0109 (16) | −0.0017 (18) | 0.0010 (17) |
| C16 | 0.0376 (18) | 0.0372 (17) | 0.038 (2) | 0.0002 (15) | 0.0028 (17) | 0.0048 (17) |
| O17 | 0.0404 (14) | 0.0367 (13) | 0.096 (3) | 0.0084 (11) | −0.0063 (17) | −0.0224 (18) |
| O1W | 0.0745 (18) | 0.0287 (12) | 0.0382 (15) | −0.0030 (12) | −0.0035 (14) | −0.0018 (12) |
Geometric parameters (Å, º)
| N1—N2 | 1.356 (4) | C10—H10A | 0.9900 |
| N1—C9 | 1.370 (4) | C10—H10B | 0.9900 |
| N1—C10 | 1.465 (4) | C11—C16 | 1.393 (5) |
| N2—N3 | 1.331 (4) | C11—C12 | 1.401 (5) |
| N3—O17 | 1.306 (4) | C12—C13 | 1.394 (5) |
| N3—C4 | 1.374 (5) | C12—H12 | 0.9500 |
| C4—C9 | 1.398 (4) | C13—C14 | 1.379 (5) |
| C4—C5 | 1.403 (5) | C13—H13 | 0.9500 |
| C5—C6 | 1.377 (6) | C14—C15 | 1.385 (5) |
| C5—H5 | 0.9500 | C14—H14 | 0.9500 |
| C6—C7 | 1.421 (6) | C15—C16 | 1.389 (5) |
| C6—H6 | 0.9500 | C15—H15 | 0.9500 |
| C7—C8 | 1.370 (5) | C16—H16 | 0.9500 |
| C7—H7 | 0.9500 | O1W—H1W | 0.8225 |
| C8—C9 | 1.401 (5) | O1W—H2W | 0.8519 |
| C8—H8 | 0.9500 | ||
| N2—N1—C9 | 111.7 (3) | N1—C10—C11 | 112.3 (3) |
| N2—N1—C10 | 119.9 (3) | N1—C10—H10A | 109.1 |
| C9—N1—C10 | 127.8 (3) | C11—C10—H10A | 109.1 |
| N3—N2—N1 | 104.9 (3) | N1—C10—H10B | 109.1 |
| O17—N3—N2 | 120.5 (3) | C11—C10—H10B | 109.1 |
| O17—N3—C4 | 127.1 (3) | H10A—C10—H10B | 107.9 |
| N2—N3—C4 | 112.4 (3) | C16—C11—C12 | 118.9 (3) |
| N3—C4—C9 | 105.4 (3) | C16—C11—C10 | 121.6 (3) |
| N3—C4—C5 | 132.3 (3) | C12—C11—C10 | 119.5 (3) |
| C9—C4—C5 | 122.3 (3) | C13—C12—C11 | 120.1 (3) |
| C6—C5—C4 | 115.5 (3) | C13—C12—H12 | 119.9 |
| C6—C5—H5 | 122.3 | C11—C12—H12 | 119.9 |
| C4—C5—H5 | 122.3 | C14—C13—C12 | 120.2 (3) |
| C5—C6—C7 | 122.1 (4) | C14—C13—H13 | 119.9 |
| C5—C6—H6 | 118.9 | C12—C13—H13 | 119.9 |
| C7—C6—H6 | 118.9 | C13—C14—C15 | 120.1 (4) |
| C8—C7—C6 | 122.4 (4) | C13—C14—H14 | 120.0 |
| C8—C7—H7 | 118.8 | C15—C14—H14 | 120.0 |
| C6—C7—H7 | 118.8 | C14—C15—C16 | 120.2 (3) |
| C7—C8—C9 | 115.9 (3) | C14—C15—H15 | 119.9 |
| C7—C8—H8 | 122.1 | C16—C15—H15 | 119.9 |
| C9—C8—H8 | 122.1 | C15—C16—C11 | 120.5 (3) |
| N1—C9—C4 | 105.5 (3) | C15—C16—H16 | 119.8 |
| N1—C9—C8 | 132.6 (3) | C11—C16—H16 | 119.8 |
| C4—C9—C8 | 121.9 (3) | H1W—O1W—H2W | 109.4 |
| C9—N1—N2—N3 | 0.5 (4) | C5—C4—C9—N1 | −179.4 (3) |
| C10—N1—N2—N3 | 172.9 (3) | N3—C4—C9—C8 | −179.3 (3) |
| N1—N2—N3—O17 | 179.9 (3) | C5—C4—C9—C8 | 0.3 (5) |
| N1—N2—N3—C4 | 0.2 (4) | C7—C8—C9—N1 | 179.4 (4) |
| O17—N3—C4—C9 | 179.6 (3) | C7—C8—C9—C4 | −0.1 (5) |
| N2—N3—C4—C9 | −0.8 (4) | N2—N1—C10—C11 | −96.1 (4) |
| O17—N3—C4—C5 | 0.0 (7) | C9—N1—C10—C11 | 74.9 (4) |
| N2—N3—C4—C5 | 179.6 (4) | N1—C10—C11—C16 | 54.8 (4) |
| N3—C4—C5—C6 | 178.9 (4) | N1—C10—C11—C12 | −126.0 (3) |
| C9—C4—C5—C6 | −0.6 (5) | C16—C11—C12—C13 | 0.7 (5) |
| C4—C5—C6—C7 | 0.8 (6) | C10—C11—C12—C13 | −178.6 (3) |
| C5—C6—C7—C8 | −0.7 (6) | C11—C12—C13—C14 | −0.4 (6) |
| C6—C7—C8—C9 | 0.3 (6) | C12—C13—C14—C15 | −0.5 (6) |
| N2—N1—C9—C4 | −1.0 (4) | C13—C14—C15—C16 | 1.0 (6) |
| C10—N1—C9—C4 | −172.6 (3) | C14—C15—C16—C11 | −0.7 (6) |
| N2—N1—C9—C8 | 179.5 (4) | C12—C11—C16—C15 | −0.1 (5) |
| C10—N1—C9—C8 | 7.8 (6) | C10—C11—C16—C15 | 179.1 (3) |
| N3—C4—C9—N1 | 1.0 (4) |
Hydrogen-bond geometry (Å, º)
Cg1 is the centroid of the C11–C16 phenyl ring.
| D—H···A | D—H | H···A | D···A | D—H···A |
| O1W—H1W···O1Wi | 0.82 | 1.93 | 2.744 (3) | 169 |
| O1W—H2W···O17 | 0.85 | 1.95 | 2.800 (3) | 180 |
| C10—H10A···O17ii | 0.99 | 2.45 | 3.400 (5) | 161 |
| C10—H10B···Cg3iii | 0.99 | 2.51 | 3.382 (4) | 147 |
Symmetry codes: (i) −x+1, −y, z+1/2; (ii) x−1/2, −y+1/2, z; (iii) x, y, z−1.
Footnotes
Supplementary data and figures for this paper are available from the IUCr electronic archives (Reference: TK5165).
References
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Associated Data
This section collects any data citations, data availability statements, or supplementary materials included in this article.
Supplementary Materials
Crystal structure: contains datablock(s) global, I. DOI: 10.1107/S1600536812044868/tk5165sup1.cif
Structure factors: contains datablock(s) I. DOI: 10.1107/S1600536812044868/tk5165Isup2.hkl
Supplementary material file. DOI: 10.1107/S1600536812044868/tk5165Isup3.cml
Additional supplementary materials: crystallographic information; 3D view; checkCIF report


