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Acta Crystallographica Section E: Structure Reports Online logoLink to Acta Crystallographica Section E: Structure Reports Online
. 2012 Nov 24;68(Pt 12):o3419. doi: 10.1107/S1600536812047319

8-Meth­oxy-2H-chromene-3-carbaldehyde

Dongsoo Koh a,*
PMCID: PMC3589003  PMID: 23476239

Abstract

In the title mol­ecule, C11H10O3, the fused dihydro­pyran ring is in a half-chair conformation with the O atom and the methyl­ene C atom positioned 0.1318 (13) and 0.143 (2) Å, respectively, on either side of the mean plane formed by the other four atoms. In the crystal, weak C—H⋯O hydrogen bonds link mol­ecules along [001].

Related literature  

For the synthesis and biological properties of chromene derivatives, see: Mun et al. (2012); Kallikat et al. (2011); Zhang et al. (2009); Gebhardt et al. (2007); Yoon et al. (2012). For the chromene group in natural products, see: Escandón-Rivera et al. (2012); Chen et al. (2008). For related structures, see: Yusufzai et al. (2012); Betz et al. (2011); Bardajee et al. (2007).graphic file with name e-68-o3419-scheme1.jpg

Experimental  

Crystal data  

  • C11H10O3

  • M r = 190.19

  • Orthorhombic, Inline graphic

  • a = 6.8940 (6) Å

  • b = 13.2079 (11) Å

  • c = 20.0964 (16) Å

  • V = 1829.9 (3) Å3

  • Z = 8

  • Mo Kα radiation

  • μ = 0.10 mm−1

  • T = 200 K

  • 0.23 × 0.21 × 0.19 mm

Data collection  

  • Bruker SMART CCD diffractometer

  • 12690 measured reflections

  • 2276 independent reflections

  • 1194 reflections with I > 2σ(I)

  • R int = 0.056

Refinement  

  • R[F 2 > 2σ(F 2)] = 0.051

  • wR(F 2) = 0.158

  • S = 0.92

  • 2276 reflections

  • 128 parameters

  • H-atom parameters constrained

  • Δρmax = 0.28 e Å−3

  • Δρmin = −0.28 e Å−3

Data collection: SMART (Bruker, 2000); cell refinement: SAINT (Bruker, 2000); data reduction: SAINT; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008); molecular graphics: PLATON (Spek, 2009); software used to prepare material for publication: SHELXTL (Sheldrick, 2008).

Supplementary Material

Crystal structure: contains datablock(s) I, global. DOI: 10.1107/S1600536812047319/lh5559sup1.cif

e-68-o3419-sup1.cif (15KB, cif)

Structure factors: contains datablock(s) I. DOI: 10.1107/S1600536812047319/lh5559Isup2.hkl

e-68-o3419-Isup2.hkl (112KB, hkl)

Supplementary material file. DOI: 10.1107/S1600536812047319/lh5559Isup3.cml

Additional supplementary materials: crystallographic information; 3D view; checkCIF report

Table 1. Hydrogen-bond geometry (Å, °).

D—H⋯A D—H H⋯A DA D—H⋯A
C6—H6B⋯O1i 0.98 2.49 3.340 (3) 145

Symmetry code: (i) Inline graphic.

supplementary crystallographic information

Comment

Chromenes have been important heterocyclic components in biologically active pharmaceuticals which show anti-inflammatory (Gebhardt et al. 2007) and anticancer (Mun et al., 2012) activities. The 2H-chromene skeleton is a core structure of oxygen heterocycles in many natural products having biological activities (Escandón-Rivera et al., 2012; Chen et al., 2008). In a continuation of our research interest to develop novel chalcone derivatives containing heterocycles (Yoon et al., 2012) the crystal structure of the title compound was determined.

The molecular structure of the title compound is shown in Fig. 1. The fused dihydropyran ring is in a half-chair conformation with atoms O2 and C3 positioned 0.1318 (13) and 0.143 (2)Å respectively, either side of the mean plane of the other four atoms (C2/C4/C10/C11). In the crystal, weak C—H···O hydrogen bonds link molecules along [001] (Fig. 2). Examples of structures of chromene compounds have been published (Yusufzai et al., 2012; Betz et al., 2011; Bardajee et al., 2007).

Experimental

To a solution of 2-hydroxy-3-methoxy-benzaldehyde (1.52 g, 10 mmol) in 20 ml of 1,4-dioxane was added excess amount of acrolein (840 mg, 15 mmol) and potassium carbonate (1.4 g, 10 mmol) at room temperature. The reaction mixture was refluxed for 8 h and TLC showed no starting material of 2-hydroxy-3-methoxy-benzaldehyde. After cooling to room temperature, the mixture was poured into iced water (40 ml) and extracted with diethylether (3 × 30 ml) and combined organic layers were dried under MgSO4. Filtration, evaporation of filtrate gave residue which was purified by flash chromatography to give the title compound (1.21 g, 82%). Recrystallization of a solution of the title compound in ethanol gave pale yellow crystals (mp: 352-353K).

Refinement

The H atoms were placed in calculated positions and refined as riding with C–H = 0.95 A [Uiso(H) = 1.2 Ueq(C)].

Figures

Fig. 1.

Fig. 1.

The molecular structure of the title compound, showing displacement ellipsoids drawn at the 50% probability level.

Fig. 2.

Fig. 2.

Part of the crystal structure with weak intermolecular C—H···O hydrogen bonds shown as dashed lines.

Crystal data

C11H10O3 F(000) = 800
Mr = 190.19 Dx = 1.381 Mg m3
Orthorhombic, Pbca Mo Kα radiation, λ = 0.71073 Å
Hall symbol: -P 2ac 2ab Cell parameters from 3190 reflections
a = 6.8940 (6) Å θ = 3.1–28.2°
b = 13.2079 (11) Å µ = 0.10 mm1
c = 20.0964 (16) Å T = 200 K
V = 1829.9 (3) Å3 Block, pale yellow
Z = 8 0.23 × 0.21 × 0.19 mm

Data collection

Bruker SMART CCD diffractometer 1194 reflections with I > 2σ(I)
Radiation source: fine-focus sealed tube Rint = 0.056
Graphite monochromator θmax = 28.3°, θmin = 2.0°
φ and ω scans h = −9→9
12690 measured reflections k = −17→16
2276 independent reflections l = −26→19

Refinement

Refinement on F2 Primary atom site location: structure-invariant direct methods
Least-squares matrix: full Secondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.051 Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.158 H-atom parameters constrained
S = 0.92 w = 1/[σ2(Fo2) + (0.0862P)2] where P = (Fo2 + 2Fc2)/3
2276 reflections (Δ/σ)max = 0.001
128 parameters Δρmax = 0.28 e Å3
0 restraints Δρmin = −0.28 e Å3

Special details

Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.

Fractional atomic coordinates and isotropic or equivalent isotropic displacement parameters (Å2)

x y z Uiso*/Ueq
O1 0.1026 (2) 0.40157 (12) 0.04444 (7) 0.0583 (5)
C1 0.1052 (3) 0.47227 (17) 0.08309 (9) 0.0456 (5)
H1 0.1013 0.5387 0.0651 0.055*
C2 0.1139 (2) 0.46201 (14) 0.15445 (8) 0.0351 (4)
C3 0.1208 (3) 0.35793 (14) 0.18379 (8) 0.0381 (5)
H3A 0.0257 0.3148 0.1601 0.046*
H3B 0.2512 0.3291 0.1757 0.046*
O2 0.08111 (19) 0.35301 (9) 0.25332 (6) 0.0438 (4)
C4 0.1089 (2) 0.43707 (13) 0.29215 (8) 0.0318 (4)
C5 0.1082 (2) 0.42242 (14) 0.36068 (9) 0.0340 (4)
O3 0.09121 (18) 0.32461 (10) 0.38224 (6) 0.0450 (4)
C6 0.0786 (3) 0.30827 (18) 0.45209 (9) 0.0530 (6)
H6A 0.1980 0.3320 0.4735 0.080*
H6B 0.0616 0.2358 0.4609 0.080*
H6C −0.0324 0.3458 0.4700 0.080*
C7 0.1241 (2) 0.50626 (15) 0.40230 (9) 0.0394 (5)
H7 0.1240 0.4974 0.4492 0.047*
C8 0.1403 (3) 0.60283 (15) 0.37558 (9) 0.0449 (5)
H8 0.1496 0.6597 0.4043 0.054*
C9 0.1428 (3) 0.61667 (15) 0.30801 (9) 0.0400 (5)
H9 0.1565 0.6829 0.2902 0.048*
C10 0.1255 (2) 0.53375 (13) 0.26518 (8) 0.0325 (4)
C11 0.1184 (2) 0.54390 (14) 0.19384 (9) 0.0351 (4)
H11 0.1170 0.6095 0.1745 0.042*

Atomic displacement parameters (Å2)

U11 U22 U33 U12 U13 U23
O1 0.0741 (11) 0.0674 (11) 0.0334 (8) 0.0080 (8) −0.0032 (7) −0.0087 (7)
C1 0.0500 (12) 0.0538 (14) 0.0330 (11) 0.0056 (9) −0.0001 (9) 0.0023 (9)
C2 0.0338 (10) 0.0450 (12) 0.0266 (10) −0.0007 (8) 0.0004 (7) 0.0008 (8)
C3 0.0505 (12) 0.0364 (11) 0.0274 (10) −0.0032 (8) 0.0029 (8) −0.0036 (7)
O2 0.0709 (10) 0.0331 (8) 0.0275 (7) −0.0052 (6) 0.0046 (6) −0.0021 (5)
C4 0.0335 (10) 0.0324 (10) 0.0294 (10) 0.0004 (7) 0.0009 (7) −0.0034 (7)
C5 0.0367 (10) 0.0368 (11) 0.0285 (10) 0.0030 (8) 0.0018 (7) 0.0038 (7)
O3 0.0620 (9) 0.0394 (8) 0.0335 (8) 0.0043 (6) 0.0047 (6) 0.0069 (6)
C6 0.0680 (14) 0.0563 (14) 0.0347 (11) 0.0109 (11) 0.0086 (9) 0.0144 (9)
C7 0.0438 (11) 0.0480 (12) 0.0264 (9) 0.0043 (9) −0.0004 (7) −0.0029 (8)
C8 0.0536 (12) 0.0419 (12) 0.0392 (11) −0.0009 (9) 0.0001 (9) −0.0124 (9)
C9 0.0501 (12) 0.0333 (11) 0.0365 (10) 0.0001 (8) 0.0021 (8) −0.0017 (8)
C10 0.0313 (9) 0.0359 (11) 0.0304 (10) 0.0011 (7) 0.0012 (7) −0.0011 (7)
C11 0.0379 (10) 0.0359 (11) 0.0315 (10) 0.0001 (8) 0.0004 (7) 0.0058 (7)

Geometric parameters (Å, º)

O1—C1 1.215 (2) O3—C6 1.423 (2)
C1—C2 1.442 (2) C6—H6A 0.9800
C1—H1 0.9500 C6—H6B 0.9800
C2—C11 1.341 (3) C6—H6C 0.9800
C2—C3 1.497 (3) C7—C8 1.388 (3)
C3—O2 1.425 (2) C7—H7 0.9500
C3—H3A 0.9900 C8—C9 1.370 (2)
C3—H3B 0.9900 C8—H8 0.9500
O2—C4 1.370 (2) C9—C10 1.398 (2)
C4—C5 1.391 (2) C9—H9 0.9500
C4—C10 1.392 (2) C10—C11 1.441 (2)
C5—O3 1.368 (2) C11—H11 0.9500
C5—C7 1.392 (3)
O1—C1—C2 124.4 (2) O3—C6—H6B 109.5
O1—C1—H1 117.8 H6A—C6—H6B 109.5
C2—C1—H1 117.8 O3—C6—H6C 109.5
C11—C2—C1 120.83 (18) H6A—C6—H6C 109.5
C11—C2—C3 120.50 (16) H6B—C6—H6C 109.5
C1—C2—C3 118.66 (16) C8—C7—C5 120.32 (17)
O2—C3—C2 114.96 (14) C8—C7—H7 119.8
O2—C3—H3A 108.5 C5—C7—H7 119.8
C2—C3—H3A 108.5 C9—C8—C7 120.46 (18)
O2—C3—H3B 108.5 C9—C8—H8 119.8
C2—C3—H3B 108.5 C7—C8—H8 119.8
H3A—C3—H3B 107.5 C8—C9—C10 120.29 (18)
C4—O2—C3 119.63 (13) C8—C9—H9 119.9
O2—C4—C5 116.79 (16) C10—C9—H9 119.9
O2—C4—C10 122.21 (16) C4—C10—C9 119.08 (17)
C5—C4—C10 120.89 (16) C4—C10—C11 118.04 (16)
O3—C5—C4 116.44 (16) C9—C10—C11 122.86 (17)
O3—C5—C7 124.61 (16) C2—C11—C10 120.88 (17)
C4—C5—C7 118.95 (17) C2—C11—H11 119.6
C5—O3—C6 117.45 (15) C10—C11—H11 119.6
O3—C6—H6A 109.5
O1—C1—C2—C11 179.25 (18) C4—C5—C7—C8 0.1 (2)
O1—C1—C2—C3 0.2 (3) C5—C7—C8—C9 −0.7 (3)
C11—C2—C3—O2 15.8 (2) C7—C8—C9—C10 1.2 (3)
C1—C2—C3—O2 −165.19 (15) O2—C4—C10—C9 176.48 (15)
C2—C3—O2—C4 −23.3 (2) C5—C4—C10—C9 0.4 (2)
C3—O2—C4—C5 −166.65 (15) O2—C4—C10—C11 −1.8 (2)
C3—O2—C4—C10 17.1 (2) C5—C4—C10—C11 −177.88 (14)
O2—C4—C5—O3 3.7 (2) C8—C9—C10—C4 −1.1 (3)
C10—C4—C5—O3 179.99 (15) C8—C9—C10—C11 177.14 (16)
O2—C4—C5—C7 −176.19 (15) C1—C2—C11—C10 179.49 (15)
C10—C4—C5—C7 0.1 (2) C3—C2—C11—C10 −1.5 (2)
C4—C5—O3—C6 −176.38 (15) C4—C10—C11—C2 −6.0 (2)
C7—C5—O3—C6 3.5 (2) C9—C10—C11—C2 175.80 (17)
O3—C5—C7—C8 −179.85 (16)

Hydrogen-bond geometry (Å, º)

D—H···A D—H H···A D···A D—H···A
C6—H6B···O1i 0.98 2.49 3.340 (3) 145

Symmetry code: (i) x, −y+1/2, z+1/2.

Footnotes

Supplementary data and figures for this paper are available from the IUCr electronic archives (Reference: LH5559).

References

  1. Bardajee, G. R., Winnik, M. A. & Lough, A. J. (2007). Acta Cryst. E63, o1269–o1270.
  2. Betz, R., McCleland, C. & Marchand, H. (2011). Acta Cryst. E67, o1151. [DOI] [PMC free article] [PubMed]
  3. Bruker (2000). SMART and SAINT Bruker AXS Inc., Madison, Wisconsin, USA.
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  5. Escandón-Rivera, S., González-Andrade, M., Bye, R., Linares, E., Navarrete, A. & Mata, R. (2012). J. Nat. Prod. 75, 968–974. [DOI] [PubMed]
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Associated Data

This section collects any data citations, data availability statements, or supplementary materials included in this article.

Supplementary Materials

Crystal structure: contains datablock(s) I, global. DOI: 10.1107/S1600536812047319/lh5559sup1.cif

e-68-o3419-sup1.cif (15KB, cif)

Structure factors: contains datablock(s) I. DOI: 10.1107/S1600536812047319/lh5559Isup2.hkl

e-68-o3419-Isup2.hkl (112KB, hkl)

Supplementary material file. DOI: 10.1107/S1600536812047319/lh5559Isup3.cml

Additional supplementary materials: crystallographic information; 3D view; checkCIF report


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