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Acta Crystallographica Section E: Structure Reports Online logoLink to Acta Crystallographica Section E: Structure Reports Online
. 2012 Nov 28;68(Pt 12):o3473. doi: 10.1107/S1600536812047988

3-(2-Ethyl-2-phenyl­hydrazin-1-yl­idene)indolin-2-one

Uzma Ashiq a,*, Rifat Ara Jamal a, Hina Ismail a, Khalid Mohammed Khan b, Sammer Yousuf b,*
PMCID: PMC3589046  PMID: 23476282

Abstract

In the title compound, C16H15N3O, the dihedral angle between the indole ring system (r.m.s. deviation = 0.020 Å) and the phenyl ring is 14.49 (9)°. The mol­ecular conformation is supported by an intra­molecular C—H⋯O inter­action, which closes an S(7) ring. In the crystal, inversion dimers linked by pairs of N—H⋯O hydrogen bonds generate R 2 2(8) loops.

Related literature  

For a related structure, see: Jamal et al. (2011). For background to Schiff bases, see: Chaluvaraju & Zaranappa (2011); Khan et al. (2009).graphic file with name e-68-o3473-scheme1.jpg

Experimental  

Crystal data  

  • C16H15N3O

  • M r = 265.31

  • Monoclinic, Inline graphic

  • a = 9.463 (2) Å

  • b = 17.303 (4) Å

  • c = 8.5403 (18) Å

  • β = 104.427 (5)°

  • V = 1354.3 (5) Å3

  • Z = 4

  • Mo Kα radiation

  • μ = 0.08 mm−1

  • T = 273 K

  • 0.35 × 0.18 × 0.06 mm

Data collection  

  • Bruker SMART APEX CCD diffractometer

  • Absorption correction: multi-scan (SADABS; Bruker, 2000) T min = 0.971, T max = 0.995

  • 7875 measured reflections

  • 2448 independent reflections

  • 1783 reflections with I > 2σ(I)

  • R int = 0.032

Refinement  

  • R[F 2 > 2σ(F 2)] = 0.047

  • wR(F 2) = 0.116

  • S = 1.08

  • 2448 reflections

  • 181 parameters

  • H-atom parameters constrained

  • Δρmax = 0.18 e Å−3

  • Δρmin = −0.17 e Å−3

Data collection: SMART (Bruker, 2000); cell refinement: SAINT (Bruker, 2000); data reduction: SAINT; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008); molecular graphics: SHELXTL (Sheldrick, 2008); software used to prepare material for publication: SHELXL97.

Supplementary Material

Crystal structure: contains datablock(s) global, I. DOI: 10.1107/S1600536812047988/hb6996sup1.cif

e-68-o3473-sup1.cif (18.4KB, cif)

Structure factors: contains datablock(s) I. DOI: 10.1107/S1600536812047988/hb6996Isup2.hkl

e-68-o3473-Isup2.hkl (120.3KB, hkl)

Supplementary material file. DOI: 10.1107/S1600536812047988/hb6996Isup3.cml

Additional supplementary materials: crystallographic information; 3D view; checkCIF report

Table 1. Hydrogen-bond geometry (Å, °).

D—H⋯A D—H H⋯A DA D—H⋯A
C15—H15A⋯O1 0.97 2.21 2.916 (2) 128
N1—H1A⋯O1i 0.86 1.99 2.844 (2) 172

Symmetry code: (i) Inline graphic.

Acknowledgments

The authors are thankful to the Higher Education Commission (HEC) Pakistan for financial support under the National Research Grants Program for Universities (grant No. 20–1862/R&D/10).

supplementary crystallographic information

Comment

Isatin and its Schiff bases form an important class of organic compounds with a variety of biological activities. Many studies have reported regarding the biological activities of Schiff bases, including their antifungal, antibacterial, anticancer and antiglycation (Khan et al., 2009; Chaluvaraju & Zaranappa. 2011). In order to study the biological activity of title compound, we undertook the synthesis of title compound and report its crystal structure in this paper (Fig. 1). The title compound I was found a potent DPPH radical scavenger.

The title compound, C16H15N3O is an structural analogue of our previously published compound 3-amino-N'-(2-oxoindolin-3-ylidene)- benzohydrazide (Jamal et al., 2011) with the difference that the keto amine phenyl moiety is replaced by phenyl ring (C9–C14) and N3 is substituted with ethyl group (C15–C16). The phenyl and indole rings are each planar with the dihedral angle of 14.49 (9)° between them. The geometry of molecule is stabilized by an intramolecular C15—H15A···O1 hydrogen bond. In the crystal molecules are consolidated by intermolecular N1—H1A···O1 hydrogen bond (Fig. 2. symmetry codes as in Table 2).

Experimental

To a solution of 2,3-Indolinedione (10 mmol, 1.47 g) in 15 ml of ethanol with few drops of glacial acetic acid and 1-ethyl-1-phenylhydrazine (10 mmol,1.36 g) in 15 ml e thanol were added. The mixture was refluxed for 24 h and a solid was obtained upon removal of the solvent by rotary evaporation.The resulting solid was washed with hexane to afford the title compound. Yellow plates were grown from a mixture of ethanol and methanol (1:1) solvents by slow evaporation at room temperature.

Refinement

H atoms on methyl, methylene, phenyl and nitrogen were positioned geometrically with C—H = 0.96, 0.97, 0.93 and C—H = 0.86 Å respectively, and constrained to ride on their parent atoms with Uiso(H)= 1.2Ueq(CH, CH2 and NH) and 1.5Ueq(CH3).

Figures

Fig. 1.

Fig. 1.

The molecular structure of (I) with displacement ellipsoids drawn at 30% probability level.

Fig. 2.

Fig. 2.

The crystal packing of the title compound. Hydrogen atoms are omitted for clearity.

Crystal data

C16H15N3O F(000) = 560
Mr = 265.31 Dx = 1.301 Mg m3
Monoclinic, P21/c Mo Kα radiation, λ = 0.71073 Å
a = 9.463 (2) Å Cell parameters from 1614 reflections
b = 17.303 (4) Å θ = 2.7–28.2°
c = 8.5403 (18) Å µ = 0.08 mm1
β = 104.427 (5)° T = 273 K
V = 1354.3 (5) Å3 Plate, yellow
Z = 4 0.35 × 0.18 × 0.06 mm

Data collection

Bruker SMART APEX CCD diffractometer 2448 independent reflections
Radiation source: fine-focus sealed tube 1783 reflections with I > 2σ(I)
Graphite monochromator Rint = 0.032
ω scan θmax = 25.5°, θmin = 2.2°
Absorption correction: multi-scan (SADABS; Bruker, 2000) h = −11→11
Tmin = 0.971, Tmax = 0.995 k = −20→20
7875 measured reflections l = −10→10

Refinement

Refinement on F2 Primary atom site location: structure-invariant direct methods
Least-squares matrix: full Secondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.047 Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.116 H-atom parameters constrained
S = 1.08 w = 1/[σ2(Fo2) + (0.0444P)2 + 0.2688P] where P = (Fo2 + 2Fc2)/3
2448 reflections (Δ/σ)max < 0.001
181 parameters Δρmax = 0.18 e Å3
0 restraints Δρmin = −0.17 e Å3

Special details

Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.

Fractional atomic coordinates and isotropic or equivalent isotropic displacement parameters (Å2)

x y z Uiso*/Ueq
O1 0.65674 (17) 0.05361 (9) −0.36767 (16) 0.0663 (5)
N1 0.52529 (18) −0.04875 (9) −0.31253 (18) 0.0506 (5)
H1A 0.4712 −0.0548 −0.4088 0.061*
N2 0.79812 (16) 0.02839 (8) 0.01956 (17) 0.0389 (4)
N3 0.89404 (17) 0.08210 (9) 0.00675 (17) 0.0426 (4)
C1 0.5134 (2) −0.09387 (10) −0.1807 (2) 0.0419 (5)
C2 0.4213 (2) −0.15483 (11) −0.1754 (2) 0.0508 (5)
H2B 0.3551 −0.1723 −0.2682 0.061*
C3 0.4310 (2) −0.18901 (12) −0.0267 (3) 0.0547 (6)
H3A 0.3707 −0.2306 −0.0194 0.066*
C4 0.5286 (2) −0.16256 (11) 0.1112 (2) 0.0515 (5)
H4A 0.5317 −0.1859 0.2101 0.062*
C5 0.6221 (2) −0.10171 (11) 0.1042 (2) 0.0446 (5)
H5A 0.6884 −0.0844 0.1971 0.053*
C6 0.6148 (2) −0.06736 (10) −0.0437 (2) 0.0392 (4)
C7 0.6978 (2) −0.00462 (10) −0.0925 (2) 0.0397 (5)
C8 0.6314 (2) 0.00580 (11) −0.2721 (2) 0.0473 (5)
C9 0.9830 (2) 0.10795 (10) 0.1577 (2) 0.0408 (5)
C10 1.0982 (2) 0.15798 (12) 0.1632 (2) 0.0526 (5)
H10A 1.1160 0.1764 0.0676 0.063*
C11 1.1871 (2) 0.18077 (13) 0.3106 (3) 0.0639 (6)
H11A 1.2647 0.2141 0.3128 0.077*
C12 1.1626 (3) 0.15511 (13) 0.4522 (3) 0.0685 (7)
H12A 1.2232 0.1703 0.5507 0.082*
C13 1.0470 (3) 0.10645 (13) 0.4474 (3) 0.0661 (7)
H13A 1.0295 0.0888 0.5437 0.079*
C14 0.9564 (2) 0.08325 (11) 0.3022 (2) 0.0524 (5)
H14A 0.8775 0.0510 0.3012 0.063*
C15 0.9259 (2) 0.10639 (11) −0.1461 (2) 0.0485 (5)
H15A 0.8863 0.0684 −0.2289 0.058*
H15B 1.0308 0.1079 −0.1319 0.058*
C16 0.8632 (2) 0.18441 (12) −0.2025 (3) 0.0636 (6)
H16A 0.8869 0.1974 −0.3022 0.095*
H16B 0.9037 0.2226 −0.1222 0.095*
H16C 0.7592 0.1831 −0.2190 0.095*

Atomic displacement parameters (Å2)

U11 U22 U33 U12 U13 U23
O1 0.0818 (11) 0.0690 (10) 0.0388 (8) −0.0259 (9) −0.0025 (7) 0.0131 (7)
N1 0.0587 (11) 0.0518 (10) 0.0347 (8) −0.0096 (9) −0.0008 (7) −0.0005 (7)
N2 0.0412 (9) 0.0364 (8) 0.0376 (8) 0.0002 (7) 0.0070 (7) 0.0019 (7)
N3 0.0475 (10) 0.0431 (9) 0.0362 (8) −0.0058 (8) 0.0084 (7) 0.0035 (7)
C1 0.0452 (11) 0.0397 (10) 0.0392 (10) 0.0032 (9) 0.0075 (8) −0.0009 (8)
C2 0.0502 (13) 0.0467 (12) 0.0536 (12) −0.0066 (10) 0.0091 (10) −0.0082 (10)
C3 0.0551 (13) 0.0460 (12) 0.0640 (14) −0.0083 (10) 0.0167 (11) 0.0001 (10)
C4 0.0528 (13) 0.0500 (12) 0.0532 (12) 0.0005 (10) 0.0158 (10) 0.0110 (10)
C5 0.0427 (11) 0.0486 (11) 0.0405 (11) 0.0037 (9) 0.0068 (8) 0.0036 (9)
C6 0.0381 (10) 0.0375 (10) 0.0406 (10) 0.0039 (8) 0.0073 (8) 0.0005 (8)
C7 0.0434 (11) 0.0384 (10) 0.0354 (9) 0.0015 (9) 0.0063 (8) 0.0015 (8)
C8 0.0552 (13) 0.0466 (11) 0.0362 (10) −0.0032 (10) 0.0040 (9) 0.0017 (9)
C9 0.0418 (11) 0.0359 (10) 0.0422 (10) 0.0025 (9) 0.0058 (8) −0.0015 (8)
C10 0.0495 (12) 0.0522 (12) 0.0559 (13) −0.0055 (10) 0.0124 (10) −0.0013 (10)
C11 0.0513 (14) 0.0584 (14) 0.0742 (16) −0.0082 (11) 0.0010 (11) −0.0089 (12)
C12 0.0771 (17) 0.0580 (14) 0.0557 (14) −0.0023 (13) −0.0113 (12) −0.0086 (11)
C13 0.0910 (18) 0.0603 (14) 0.0404 (12) −0.0040 (14) 0.0042 (11) −0.0006 (10)
C14 0.0635 (14) 0.0495 (12) 0.0422 (11) −0.0071 (11) 0.0095 (10) −0.0004 (9)
C15 0.0481 (12) 0.0550 (12) 0.0426 (11) −0.0001 (10) 0.0119 (9) 0.0024 (9)
C16 0.0624 (15) 0.0605 (14) 0.0656 (14) 0.0000 (12) 0.0113 (11) 0.0163 (11)

Geometric parameters (Å, º)

O1—C8 1.227 (2) C7—C8 1.517 (2)
N1—C8 1.359 (2) C9—C10 1.384 (3)
N1—C1 1.398 (2) C9—C14 1.387 (3)
N1—H1A 0.8600 C10—C11 1.386 (3)
N2—C7 1.300 (2) C10—H10A 0.9300
N2—N3 1.323 (2) C11—C12 1.361 (3)
N3—C9 1.425 (2) C11—H11A 0.9300
N3—C15 1.472 (2) C12—C13 1.373 (3)
C1—C2 1.376 (3) C12—H12A 0.9300
C1—C6 1.393 (2) C13—C14 1.380 (3)
C2—C3 1.383 (3) C13—H13A 0.9300
C2—H2B 0.9300 C14—H14A 0.9300
C3—C4 1.381 (3) C15—C16 1.504 (3)
C3—H3A 0.9300 C15—H15A 0.9700
C4—C5 1.386 (3) C15—H15B 0.9700
C4—H4A 0.9300 C16—H16A 0.9600
C5—C6 1.382 (2) C16—H16B 0.9600
C5—H5A 0.9300 C16—H16C 0.9600
C6—C7 1.460 (3)
C8—N1—C1 112.74 (15) C10—C9—C14 118.60 (18)
C8—N1—H1A 123.6 C10—C9—N3 120.67 (17)
C1—N1—H1A 123.6 C14—C9—N3 120.73 (17)
C7—N2—N3 129.64 (15) C9—C10—C11 120.3 (2)
N2—N3—C9 114.13 (14) C9—C10—H10A 119.9
N2—N3—C15 124.76 (15) C11—C10—H10A 119.9
C9—N3—C15 120.49 (16) C12—C11—C10 121.0 (2)
C2—C1—C6 122.30 (17) C12—C11—H11A 119.5
C2—C1—N1 129.31 (17) C10—C11—H11A 119.5
C6—C1—N1 108.40 (16) C11—C12—C13 119.0 (2)
C1—C2—C3 117.40 (18) C11—C12—H12A 120.5
C1—C2—H2B 121.3 C13—C12—H12A 120.5
C3—C2—H2B 121.3 C12—C13—C14 121.1 (2)
C4—C3—C2 121.2 (2) C12—C13—H13A 119.4
C4—C3—H3A 119.4 C14—C13—H13A 119.4
C2—C3—H3A 119.4 C13—C14—C9 120.0 (2)
C3—C4—C5 120.91 (19) C13—C14—H14A 120.0
C3—C4—H4A 119.5 C9—C14—H14A 120.0
C5—C4—H4A 119.5 N3—C15—C16 112.86 (17)
C6—C5—C4 118.62 (18) N3—C15—H15A 109.0
C6—C5—H5A 120.7 C16—C15—H15A 109.0
C4—C5—H5A 120.7 N3—C15—H15B 109.0
C5—C6—C1 119.53 (18) C16—C15—H15B 109.0
C5—C6—C7 132.28 (16) H15A—C15—H15B 107.8
C1—C6—C7 108.18 (15) C15—C16—H16A 109.5
N2—C7—C6 117.53 (15) C15—C16—H16B 109.5
N2—C7—C8 137.30 (17) H16A—C16—H16B 109.5
C6—C7—C8 105.09 (15) C15—C16—H16C 109.5
O1—C8—N1 123.66 (17) H16A—C16—H16C 109.5
O1—C8—C7 130.73 (18) H16B—C16—H16C 109.5
N1—C8—C7 105.54 (16)
C7—N2—N3—C9 176.71 (17) C1—N1—C8—O1 −177.0 (2)
C7—N2—N3—C15 −12.3 (3) C1—N1—C8—C7 0.2 (2)
C8—N1—C1—C2 −178.8 (2) N2—C7—C8—O1 −1.0 (4)
C8—N1—C1—C6 1.2 (2) C6—C7—C8—O1 175.5 (2)
C6—C1—C2—C3 0.9 (3) N2—C7—C8—N1 −178.0 (2)
N1—C1—C2—C3 −179.08 (19) C6—C7—C8—N1 −1.4 (2)
C1—C2—C3—C4 0.5 (3) N2—N3—C9—C10 173.23 (16)
C2—C3—C4—C5 −1.3 (3) C15—N3—C9—C10 1.8 (3)
C3—C4—C5—C6 0.6 (3) N2—N3—C9—C14 −6.5 (3)
C4—C5—C6—C1 0.7 (3) C15—N3—C9—C14 −177.88 (17)
C4—C5—C6—C7 −178.50 (19) C14—C9—C10—C11 1.9 (3)
C2—C1—C6—C5 −1.6 (3) N3—C9—C10—C11 −177.84 (18)
N1—C1—C6—C5 178.46 (17) C9—C10—C11—C12 −0.5 (3)
C2—C1—C6—C7 177.86 (17) C10—C11—C12—C13 −0.5 (4)
N1—C1—C6—C7 −2.1 (2) C11—C12—C13—C14 0.2 (4)
N3—N2—C7—C6 174.94 (17) C12—C13—C14—C9 1.2 (3)
N3—N2—C7—C8 −8.8 (4) C10—C9—C14—C13 −2.2 (3)
C5—C6—C7—N2 −1.2 (3) N3—C9—C14—C13 177.49 (18)
C1—C6—C7—N2 179.53 (16) N2—N3—C15—C16 106.2 (2)
C5—C6—C7—C8 −178.5 (2) C9—N3—C15—C16 −83.3 (2)
C1—C6—C7—C8 2.2 (2)

Hydrogen-bond geometry (Å, º)

D—H···A D—H H···A D···A D—H···A
C15—H15A···O1 0.97 2.21 2.916 (2) 128
N1—H1A···O1i 0.86 1.99 2.844 (2) 172

Symmetry code: (i) −x+1, −y, −z−1.

Footnotes

Supplementary data and figures for this paper are available from the IUCr electronic archives (Reference: HB6996).

References

  1. Bruker (2000). SADABS, SMART and SAINT Bruker AXS Inc., Madison, Wisconsin, USA.
  2. Chaluvaraju, K. C. & Zaranappa (2011). Res. J. Pharm. Biol. Chem. Sci. 2, 541–546.
  3. Jamal, R. A., Ashiq, U., Yousuf, S. & Ain, Q. ul (2011). Acta Cryst E67, o2166. [DOI] [PMC free article] [PubMed]
  4. Khan, K. M., Khan, M., Ali, M., Taha, M., Rasheed, S., Perveen, S. & Choudhary, M. I. (2009). Bioorg. Med. Chem. 17, 7795–7801. [DOI] [PubMed]
  5. Sheldrick, G. M. (2008). Acta Cryst A64, 112–122. [DOI] [PubMed]

Associated Data

This section collects any data citations, data availability statements, or supplementary materials included in this article.

Supplementary Materials

Crystal structure: contains datablock(s) global, I. DOI: 10.1107/S1600536812047988/hb6996sup1.cif

e-68-o3473-sup1.cif (18.4KB, cif)

Structure factors: contains datablock(s) I. DOI: 10.1107/S1600536812047988/hb6996Isup2.hkl

e-68-o3473-Isup2.hkl (120.3KB, hkl)

Supplementary material file. DOI: 10.1107/S1600536812047988/hb6996Isup3.cml

Additional supplementary materials: crystallographic information; 3D view; checkCIF report


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