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. 1993 Jun;13(6):3282–3290. doi: 10.1128/mcb.13.6.3282

Transcriptional control of delta-crystallin gene expression in the chicken embryo lens: demonstration by a new method for measuring mRNA metabolism.

X Li 1, D C Beebe 1
PMCID: PMC359780  PMID: 7684494

Abstract

Crystallins are proteins that accumulate to very high concentrations in the fiber cells of the lens of the eye. Crystallins are responsible for the transparency and high refractive index that are essential for lens function. In the chicken embryo, delta-crystallin accounts for more than 70% of the newly synthesized lens proteins. We used density labeling and gene-specific polymerase chain reaction (PCR) to determine the mechanism regulating the expression of the two very similar delta-crystallin genes. Newly synthesized RNA was separated from preexisting RNA by incubating the lenses with 15N- and 13C-labeled ribonucleosides and then separating newly synthesized, density-labeled RNA from the bulk of light RNA by equilibrium density centrifugation in NaI-KI gradients. The relative abundances of the two crystallin mRNAs in the separated fractions were then determined by PCR. This method permitted the quantitation of newly synthesized processed and unprocessed delta-crystallin mRNAs. Additional studies used intron- and gene-specific PCR primers to determine the relative expression of the two delta-crystallin genes in processed RNA and unprocessed RNA extracted from different regions of the embryonic lens. Results of these tests indicated that the differential expression of the delta-crystallin genes was regulated primarily at the level of transcription. This outcome was not expected on the basis of the results of previous studies, which used in vitro transcription and transfection methods to evaluate the relative strengths of delta-crystallin promoter and enhancer sequences. Our data suggest that the cultured cells used in these earlier studies may not have provided an accurate view of delta-crystallin regulation in the intact lens.

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Selected References

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  1. Atwater J. A., Wisdom R., Verma I. M. Regulated mRNA stability. Annu Rev Genet. 1990;24:519–541. doi: 10.1146/annurev.ge.24.120190.002511. [DOI] [PubMed] [Google Scholar]
  2. Beebe D. C., Feagans D. E. A tissue culture system for studying lens cell differentiation. Vision Res. 1981;21(1):113–118. doi: 10.1016/0042-6989(81)90143-7. [DOI] [PubMed] [Google Scholar]
  3. Bhat S. P., Jones R. E., Sullivan M. A., Piatigorsky J. Chicken lens crystallin DNA sequences show at least two delta-crystallin genes. Nature. 1980 Mar 20;284(5753):234–238. doi: 10.1038/284234a0. [DOI] [PubMed] [Google Scholar]
  4. Borrás T., Nickerson J. M., Chepelinsky A. B., Piatigorsky J. Structural and functional evidence for differential promoter activity of the two linked delta-crystallin genes in the chicken. EMBO J. 1985 Feb;4(2):445–452. doi: 10.1002/j.1460-2075.1985.tb03649.x. [DOI] [PMC free article] [PubMed] [Google Scholar]
  5. Borrás T., Peterson C. A., Piatigorsky J. Evidence for positive and negative regulation in the promoter of the chicken delta 1-crystallin gene. Dev Biol. 1988 May;127(1):209–219. doi: 10.1016/0012-1606(88)90202-3. [DOI] [PubMed] [Google Scholar]
  6. Bowman L. H., Emerson C. P., Jr Formation and stability of cytoplasmic mRNAs during myoblast differentiation: pulse-chase and density labeling analyses. Dev Biol. 1980 Nov;80(1):146–166. doi: 10.1016/0012-1606(80)90505-9. [DOI] [PubMed] [Google Scholar]
  7. Chepelinsky A. B., King C. R., Zelenka P. S., Piatigorsky J. Lens-specific expression of the chloramphenicol acetyltransferase gene promoted by 5' flanking sequences of the murine alpha A-crystallin gene in explanted chicken lens epithelia. Proc Natl Acad Sci U S A. 1985 Apr;82(8):2334–2338. doi: 10.1073/pnas.82.8.2334. [DOI] [PMC free article] [PubMed] [Google Scholar]
  8. Chomczynski P., Sacchi N. Single-step method of RNA isolation by acid guanidinium thiocyanate-phenol-chloroform extraction. Anal Biochem. 1987 Apr;162(1):156–159. doi: 10.1006/abio.1987.9999. [DOI] [PubMed] [Google Scholar]
  9. Das G. C., Piatigorsky J. Promoter activity of the two chicken delta-crystallin genes in a Hela cell extract. Curr Eye Res. 1988 Apr;7(4):331–340. doi: 10.3109/02713688809031782. [DOI] [PubMed] [Google Scholar]
  10. Goldstein E. S., Penman S. Regulation of protein synthesis in mammalian cells. V. Further studies on the effect of actinomycin D on translation control in HeLa cells. J Mol Biol. 1973 Oct 25;80(2):243–254. doi: 10.1016/0022-2836(73)90170-8. [DOI] [PubMed] [Google Scholar]
  11. Grainger R. M. The preparation of 13C-15N-labeled nucleosides and methods for fractionating density-labeled RNA. Anal Biochem. 1976 May 7;72:513–526. doi: 10.1016/0003-2697(76)90561-3. [DOI] [PubMed] [Google Scholar]
  12. Grillo M., Margolis F. L. Use of reverse transcriptase polymerase chain reaction to monitor expression of intronless genes. Biotechniques. 1990 Sep;9(3):262, 264, 266-8. [PubMed] [Google Scholar]
  13. Hawkins J. W., Nickerson J. M., Sullivan M. A., Piatigorsky J. The chicken delta-crystallin gene family. Two genes of similar structure in close chromosomal approximation. J Biol Chem. 1984 Aug 10;259(15):9821–9825. [PubMed] [Google Scholar]
  14. Kondoh H., Araki I., Yasuda K., Matsubasa T., Mori M. Expression of the chicken 'delta 2-crystallin' gene in mouse cells: evidence for encoding of argininosuccinate lyase. Gene. 1991 Mar 15;99(2):267–271. doi: 10.1016/0378-1119(91)90137-z. [DOI] [PubMed] [Google Scholar]
  15. Levis R., Penman S. The metabolism of poly (A)+ and poly(A)-hnRNA in cultured Drosophila cells studied with a rapid uridine pulse-chase. Cell. 1977 May;11(1):105–113. doi: 10.1016/0092-8674(77)90321-x. [DOI] [PubMed] [Google Scholar]
  16. Li X. A., Beebe D. C. Messenger RNA stabilization in chicken lens development: a reexamination. Dev Biol. 1991 Jul;146(1):239–241. doi: 10.1016/0012-1606(91)90463-d. [DOI] [PubMed] [Google Scholar]
  17. Modak S. P., Perdue S. W. Terminal lens cell differentiation. I. Histological and microspectrophotometric analysis of nuclear degeneration. Exp Cell Res. 1970 Jan;59(1):43–56. doi: 10.1016/0014-4827(70)90622-1. [DOI] [PubMed] [Google Scholar]
  18. Müllner E. W., Kühn L. C. A stem-loop in the 3' untranslated region mediates iron-dependent regulation of transferrin receptor mRNA stability in the cytoplasm. Cell. 1988 Jun 3;53(5):815–825. doi: 10.1016/0092-8674(88)90098-0. [DOI] [PubMed] [Google Scholar]
  19. Nickerson J. M., Wawrousek E. F., Borras T., Hawkins J. W., Norman B. L., Filpula D. R., Nagle J. W., Ally A. H., Piatigorsky J. Sequence of the chicken delta 2 crystallin gene and its intergenic spacer. Extreme homology with the delta 1 crystallin gene. J Biol Chem. 1986 Jan 15;261(2):552–557. [PubMed] [Google Scholar]
  20. Nickerson J. M., Wawrousek E. F., Hawkins J. W., Wakil A. S., Wistow G. J., Thomas G., Norman B. L., Piatigorsky J. The complete sequence of the chicken delta 1 crystallin gene and its 5' flanking region. J Biol Chem. 1985 Aug 5;260(16):9100–9105. [PubMed] [Google Scholar]
  21. Parker D. S., Wawrousek E. F., Piatigorsky J. Expression of the delta-crystallin genes in the embryonic chicken lens. Dev Biol. 1988 Apr;126(2):375–381. doi: 10.1016/0012-1606(88)90147-9. [DOI] [PubMed] [Google Scholar]
  22. Piatigorsky J. Lens crystallins and their genes: diversity and tissue-specific expression. FASEB J. 1989 Jun;3(8):1933–1940. doi: 10.1096/fasebj.3.8.2656357. [DOI] [PubMed] [Google Scholar]
  23. Piatigorsky J. Lens differentiation in vertebrates. A review of cellular and molecular features. Differentiation. 1981;19(3):134–153. doi: 10.1111/j.1432-0436.1981.tb01141.x. [DOI] [PubMed] [Google Scholar]
  24. Piatigorsky J., O'Brien W. E., Norman B. L., Kalumuck K., Wistow G. J., Borras T., Nickerson J. M., Wawrousek E. F. Gene sharing by delta-crystallin and argininosuccinate lyase. Proc Natl Acad Sci U S A. 1988 May;85(10):3479–3483. doi: 10.1073/pnas.85.10.3479. [DOI] [PMC free article] [PubMed] [Google Scholar]
  25. Steinberg R. A., Levinson B. B., Tomkins G. M. "Superinduction" of tyrosine aminotransferase by actinomycin D: a reevaluation. Cell. 1975 May;5(1):29–35. doi: 10.1016/0092-8674(75)90088-4. [DOI] [PubMed] [Google Scholar]
  26. Thomas G., Zelenka P. S., Cuthbertson R. A., Norman B. L., Piatigorsky J. Differential expression of the two delta-crystallin/argininosuccinate lyase genes in lens, heart, and brain of chicken embryos. New Biol. 1990 Oct;2(10):903–914. [PubMed] [Google Scholar]
  27. Wawrousek E. F., Nickerson J. M., Piatigorsky J. Two delta-crystallin polypeptides are derived from a cloned delta 1-crystallin cDNA. FEBS Lett. 1986 Sep 15;205(2):235–240. doi: 10.1016/0014-5793(86)80904-8. [DOI] [PubMed] [Google Scholar]
  28. Winkles J. A., Grainger R. M. Differential stability of Drosophila embryonic mRNAs during subsequent larval development. J Cell Biol. 1985 Nov;101(5 Pt 1):1808–1816. doi: 10.1083/jcb.101.5.1808. [DOI] [PMC free article] [PubMed] [Google Scholar]
  29. Wistow G., Piatigorsky J. Recruitment of enzymes as lens structural proteins. Science. 1987 Jun 19;236(4808):1554–1556. doi: 10.1126/science.3589669. [DOI] [PubMed] [Google Scholar]
  30. Zelenka P. S., Pallansch L. A., Vatal M. Nuclear run-on transcription from primary embryonic lens tissue. Dev Biol. 1989 Mar;132(1):69–72. doi: 10.1016/0012-1606(89)90205-4. [DOI] [PubMed] [Google Scholar]
  31. de Pomerai D. I., Ip W. K., McLaughlin M., Perry K. C. Expression in non-lens tissues of an enzyme activity related to the 'lens-specific' protein, delta crystallin. Development. 1991 Jan;111(1):181–190. doi: 10.1242/dev.111.1.181. [DOI] [PubMed] [Google Scholar]

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