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. 1991 Sep;11(9):4751–4759. doi: 10.1128/mcb.11.9.4751

Tec2, a second transposon-like element demonstrating developmentally programmed excision in Euplotes crassus.

M F Krikau 1, C L Jahn 1
PMCID: PMC361374  PMID: 1652062

Abstract

The analysis of a repetitive DNA interruption of the micronuclear precursor to a 0.85-kb macronuclear gene in the hypotrich Euplotes crassus has led to the identification of a second transposon-like element named Tec2. Two copies of this element, one inserted into the other, compose the interruption. The Tec2 element resembles the previously characterized Tec1 element in overall size, copy number, length, and extreme terminal sequence of its inverted repeats and in the apparent use of a 5'-TA-3' target site. In addition, extrachromosomal circular forms of Tec2 appear in DNA isolated from cells undergoing macronuclear development at the same time and with the same conformation as extrachromosomal circular forms of Tec1. These similarities suggest that the Tec1 and Tec2 elements may be under the same type of regulation during macronuclear development.

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Selected References

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  1. Baird S. E., Fino G. M., Tausta S. L., Klobutcher L. A. Micronuclear genome organization in Euplotes crassus: a transposonlike element is removed during macronuclear development. Mol Cell Biol. 1989 Sep;9(9):3793–3807. doi: 10.1128/mcb.9.9.3793. [DOI] [PMC free article] [PubMed] [Google Scholar]
  2. Baird S. E., Klobutcher L. A. Characterization of chromosome fragmentation in two protozoans and identification of a candidate fragmentation sequence in Euplotes crassus. Genes Dev. 1989 May;3(5):585–597. doi: 10.1101/gad.3.5.585. [DOI] [PubMed] [Google Scholar]
  3. Cappello J., Cohen S. M., Lodish H. F. Dictyostelium transposable element DIRS-1 preferentially inserts into DIRS-1 sequences. Mol Cell Biol. 1984 Oct;4(10):2207–2213. doi: 10.1128/mcb.4.10.2207. [DOI] [PMC free article] [PubMed] [Google Scholar]
  4. Cherry J. M., Blackburn E. H. The internally located telomeric sequences in the germ-line chromosomes of Tetrahymena are at the ends of transposon-like elements. Cell. 1985 Dec;43(3 Pt 2):747–758. doi: 10.1016/0092-8674(85)90248-x. [DOI] [PubMed] [Google Scholar]
  5. Döring H. P., Tillmann E., Starlinger P. DNA sequence of the maize transposable element Dissociation. Nature. 1984 Jan 12;307(5947):127–130. doi: 10.1038/307127a0. [DOI] [PubMed] [Google Scholar]
  6. Feinberg A. P., Vogelstein B. A technique for radiolabeling DNA restriction endonuclease fragments to high specific activity. Anal Biochem. 1983 Jul 1;132(1):6–13. doi: 10.1016/0003-2697(83)90418-9. [DOI] [PubMed] [Google Scholar]
  7. Harper D. S., Jahn C. L. Actin, tubulin and H4 histone genes in three species of hypotrichous ciliated protozoa. Gene. 1989 Jan 30;75(1):93–107. doi: 10.1016/0378-1119(89)90386-7. [DOI] [PubMed] [Google Scholar]
  8. Hattori M., Sakaki Y. Dideoxy sequencing method using denatured plasmid templates. Anal Biochem. 1986 Feb 1;152(2):232–238. doi: 10.1016/0003-2697(86)90403-3. [DOI] [PubMed] [Google Scholar]
  9. Helftenbein E. Nucleotide sequence of a macronuclear DNA molecule coding for alpha-tubulin from the ciliate Stylonychia lemnae. Special codon usage: TAA is not a translation termination codon. Nucleic Acids Res. 1985 Jan 25;13(2):415–433. doi: 10.1093/nar/13.2.415. [DOI] [PMC free article] [PubMed] [Google Scholar]
  10. Herrick G., Cartinhour S., Dawson D., Ang D., Sheets R., Lee A., Williams K. Mobile elements bounded by C4A4 telomeric repeats in Oxytricha fallax. Cell. 1985 Dec;43(3 Pt 2):759–768. doi: 10.1016/0092-8674(85)90249-1. [DOI] [PubMed] [Google Scholar]
  11. Hoffman-Liebermann B., Liebermann D., Kedes L. H., Cohen S. N. TU elements: a heterogeneous family of modularly structured eucaryotic transposons. Mol Cell Biol. 1985 May;5(5):991–1001. doi: 10.1128/mcb.5.5.991. [DOI] [PMC free article] [PubMed] [Google Scholar]
  12. Hunter D. J., Williams K., Cartinhour S., Herrick G. Precise excision of telomere-bearing transposons during Oxytricha fallax macronuclear development. Genes Dev. 1989 Dec;3(12B):2101–2112. doi: 10.1101/gad.3.12b.2101. [DOI] [PubMed] [Google Scholar]
  13. Jahn C. L. Bal31 sensitivity of micronuclear sequences homologous to C4A4/G4T4 repeats in Oxytricha nova. Exp Cell Res. 1988 Jul;177(1):162–175. doi: 10.1016/0014-4827(88)90034-1. [DOI] [PubMed] [Google Scholar]
  14. Jahn C. L., Krikau M. F., Shyman S. Developmentally coordinated en masse excision of a highly repetitive element in E. crassus. Cell. 1989 Dec 22;59(6):1009–1018. doi: 10.1016/0092-8674(89)90757-5. [DOI] [PubMed] [Google Scholar]
  15. Jahn C. L., Nilles L. A., Krikau M. F. Organization of the Euplotes crassus micronuclear genome. J Protozool. 1988 Nov;35(4):590–601. doi: 10.1111/j.1550-7408.1988.tb04157.x. [DOI] [PubMed] [Google Scholar]
  16. Kaine B. P., Spear B. B. Nucleotide sequence of a macronuclear gene for actin in Oxytricha fallax. Nature. 1982 Feb 4;295(5848):430–432. doi: 10.1038/295430a0. [DOI] [PubMed] [Google Scholar]
  17. Laski F. A., Rio D. C., Rubin G. M. Tissue specificity of Drosophila P element transposition is regulated at the level of mRNA splicing. Cell. 1986 Jan 17;44(1):7–19. doi: 10.1016/0092-8674(86)90480-0. [DOI] [PubMed] [Google Scholar]
  18. Levitt A., Emmons S. W. The Tc2 transposon in Caenorhabditis elegans. Proc Natl Acad Sci U S A. 1989 May;86(9):3232–3236. doi: 10.1073/pnas.86.9.3232. [DOI] [PMC free article] [PubMed] [Google Scholar]
  19. Mullis K., Faloona F., Scharf S., Saiki R., Horn G., Erlich H. Specific enzymatic amplification of DNA in vitro: the polymerase chain reaction. Cold Spring Harb Symp Quant Biol. 1986;51(Pt 1):263–273. doi: 10.1101/sqb.1986.051.01.032. [DOI] [PubMed] [Google Scholar]
  20. Murray M. G., Thompson W. F. Rapid isolation of high molecular weight plant DNA. Nucleic Acids Res. 1980 Oct 10;8(19):4321–4325. doi: 10.1093/nar/8.19.4321. [DOI] [PMC free article] [PubMed] [Google Scholar]
  21. Poole S. J., Firtel R. A. Genomic instability and mobile genetic elements in regions surrounding two discoidin I genes of Dictyostelium discoideum. Mol Cell Biol. 1984 Apr;4(4):671–680. doi: 10.1128/mcb.4.4.671. [DOI] [PMC free article] [PubMed] [Google Scholar]
  22. Rio D. C. Molecular mechanisms regulating Drosophila P element transposition. Annu Rev Genet. 1990;24:543–578. doi: 10.1146/annurev.ge.24.120190.002551. [DOI] [PubMed] [Google Scholar]
  23. Roberts D., Hoopes B. C., McClure W. R., Kleckner N. IS10 transposition is regulated by DNA adenine methylation. Cell. 1985 Nov;43(1):117–130. doi: 10.1016/0092-8674(85)90017-0. [DOI] [PubMed] [Google Scholar]
  24. Roth M., Lin M., Prescott D. M. Large scale synchronous mating and the study of macronuclear development in Euplotes crassus. J Cell Biol. 1985 Jul;101(1):79–84. doi: 10.1083/jcb.101.1.79. [DOI] [PMC free article] [PubMed] [Google Scholar]
  25. Sanger F., Nicklen S., Coulson A. R. DNA sequencing with chain-terminating inhibitors. Proc Natl Acad Sci U S A. 1977 Dec;74(12):5463–5467. doi: 10.1073/pnas.74.12.5463. [DOI] [PMC free article] [PubMed] [Google Scholar]
  26. Simons R. W., Kleckner N. Translational control of IS10 transposition. Cell. 1983 Sep;34(2):683–691. doi: 10.1016/0092-8674(83)90401-4. [DOI] [PubMed] [Google Scholar]
  27. Southern E. M. Detection of specific sequences among DNA fragments separated by gel electrophoresis. J Mol Biol. 1975 Nov 5;98(3):503–517. doi: 10.1016/s0022-2836(75)80083-0. [DOI] [PubMed] [Google Scholar]
  28. Swanton M. T., Heumann J. M., Prescott D. M. Gene-sized DNA molecules of the macronuclei in three species of hypotrichs: size distributions and absence of nicks. DNA of ciliated protozoa. VIII. Chromosoma. 1980;77(2):217–227. doi: 10.1007/BF00329546. [DOI] [PubMed] [Google Scholar]

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