Abstract
The DNA sequences of a cDNA clone and the macronuclear genomic fragment corresponding to the functional copy of the SerH3 surface antigen gene of Tetrahymena thermophila were determined. Primer extension and nuclease protection assays show that the SerH3 transcription unit is 1,425 nucleotides long and contains no introns. The predicted polypeptide encoded by the SerH3 gene has a molecular mass of 44,415 daltons; one-third of its 439 residues are either cysteine, serine, or threonine. The central half of the polypeptide consists of three homologous domains in tandem array; within these domains, the cysteine, proline, and tryptophan residues occur in highly regular patterns.
Full text
PDF![6091](https://cdn.ncbi.nlm.nih.gov/pmc/blobs/754c/361413/631924ced7b9/molcellb00047-0501.png)
![6092](https://cdn.ncbi.nlm.nih.gov/pmc/blobs/754c/361413/1eca19f207c8/molcellb00047-0502.png)
![6093](https://cdn.ncbi.nlm.nih.gov/pmc/blobs/754c/361413/e681bdb13659/molcellb00047-0503.png)
![6094](https://cdn.ncbi.nlm.nih.gov/pmc/blobs/754c/361413/d88f6c01fc05/molcellb00047-0504.png)
![6095](https://cdn.ncbi.nlm.nih.gov/pmc/blobs/754c/361413/b43426f42f02/molcellb00047-0505.png)
![6096](https://cdn.ncbi.nlm.nih.gov/pmc/blobs/754c/361413/bd14e97d1827/molcellb00047-0506.png)
Images in this article
Selected References
These references are in PubMed. This may not be the complete list of references from this article.
- Bobek L., Rekosh D. M., van Keulen H., LoVerde P. T. Characterization of a female-specific cDNA derived from a developmentally regulated mRNA in the human blood fluke Schistosoma mansoni. Proc Natl Acad Sci U S A. 1986 Aug;83(15):5544–5548. doi: 10.1073/pnas.83.15.5544. [DOI] [PMC free article] [PubMed] [Google Scholar]
- Borst P., Cross G. A. Molecular basis for trypanosome antigenic variation. Cell. 1982 Jun;29(2):291–303. doi: 10.1016/0092-8674(82)90146-5. [DOI] [PubMed] [Google Scholar]
- Cupples C. G., Pearlman R. E. Isolation and characterization of the actin gene from Tetrahymena thermophila. Proc Natl Acad Sci U S A. 1986 Jul;83(14):5160–5164. doi: 10.1073/pnas.83.14.5160. [DOI] [PMC free article] [PubMed] [Google Scholar]
- Doerder F. P., Hallberg R. L. Identification of a cDNA coding for the SerH3 surface protein of Tetrahymena thermophila. J Protozool. 1989 May-Jun;36(3):304–307. doi: 10.1111/j.1550-7408.1989.tb05368.x. [DOI] [PubMed] [Google Scholar]
- Forney J. D., Epstein L. M., Preer L. B., Rudman B. M., Widmayer D. J., Klein W. H., Preer J. R., Jr Structure and expression of genes for surface proteins in Paramecium. Mol Cell Biol. 1983 Mar;3(3):466–474. doi: 10.1128/mcb.3.3.466. [DOI] [PMC free article] [PubMed] [Google Scholar]
- Galinski M. R., Arnot D. E., Cochrane A. H., Barnwell J. W., Nussenzweig R. S., Enea V. The circumsporozoite gene of the Plasmodium cynomolgi complex. Cell. 1987 Jan 30;48(2):311–319. doi: 10.1016/0092-8674(87)90434-x. [DOI] [PubMed] [Google Scholar]
- Gay D. A., Yen T. J., Lau J. T., Cleveland D. W. Sequences that confer beta-tubulin autoregulation through modulated mRNA stability reside within exon 1 of a beta-tubulin mRNA. Cell. 1987 Aug 28;50(5):671–679. doi: 10.1016/0092-8674(87)90325-4. [DOI] [PubMed] [Google Scholar]
- Godiska R. Structure and sequence of the H surface protein gene of Paramecium and comparison with related genes. Mol Gen Genet. 1987 Jul;208(3):529–536. doi: 10.1007/BF00328151. [DOI] [PubMed] [Google Scholar]
- Gorovsky M. A. Genome organization and reorganization in Tetrahymena. Annu Rev Genet. 1980;14:203–239. doi: 10.1146/annurev.ge.14.120180.001223. [DOI] [PubMed] [Google Scholar]
- Hanyu N., Kuchino Y., Nishimura S., Beier H. Dramatic events in ciliate evolution: alteration of UAA and UAG termination codons to glutamine codons due to anticodon mutations in two Tetrahymena tRNAs. EMBO J. 1986 Jun;5(6):1307–1311. doi: 10.1002/j.1460-2075.1986.tb04360.x. [DOI] [PMC free article] [PubMed] [Google Scholar]
- Harper D. S., Jahn C. L. Differential use of termination codons in ciliated protozoa. Proc Natl Acad Sci U S A. 1989 May;86(9):3252–3256. doi: 10.1073/pnas.86.9.3252. [DOI] [PMC free article] [PubMed] [Google Scholar]
- Henikoff S. Unidirectional digestion with exonuclease III creates targeted breakpoints for DNA sequencing. Gene. 1984 Jun;28(3):351–359. doi: 10.1016/0378-1119(84)90153-7. [DOI] [PubMed] [Google Scholar]
- Horowitz S., Bowen J. K., Bannon G. A., Gorovsky M. A. Unusual features of transcribed and translated regions of the histone H4 gene family of Tetrahymena thermophila. Nucleic Acids Res. 1987 Jan 12;15(1):141–160. doi: 10.1093/nar/15.1.141. [DOI] [PMC free article] [PubMed] [Google Scholar]
- Horowitz S., Gorovsky M. A. An unusual genetic code in nuclear genes of Tetrahymena. Proc Natl Acad Sci U S A. 1985 Apr;82(8):2452–2455. doi: 10.1073/pnas.82.8.2452. [DOI] [PMC free article] [PubMed] [Google Scholar]
- Kile J. P., Love H. D., Jr, Hubach C. A., Bannon G. A. Reproducible and variable rearrangements of a Tetrahymena thermophila surface protein gene family occur during macronuclear development. Mol Cell Biol. 1988 Nov;8(11):5043–5046. doi: 10.1128/mcb.8.11.5043. [DOI] [PMC free article] [PubMed] [Google Scholar]
- Kuchino Y., Hanyu N., Tashiro F., Nishimura S. Tetrahymena thermophila glutamine tRNA and its gene that corresponds to UAA termination codon. Proc Natl Acad Sci U S A. 1985 Jul;82(14):4758–4762. doi: 10.1073/pnas.82.14.4758. [DOI] [PMC free article] [PubMed] [Google Scholar]
- Love H. D., Jr, Allen-Nash A., Zhao Q. A., Bannon G. A. mRNA stability plays a major role in regulating the temperature-specific expression of a Tetrahymena thermophila surface protein. Mol Cell Biol. 1988 Jan;8(1):427–432. doi: 10.1128/mcb.8.1.427. [DOI] [PMC free article] [PubMed] [Google Scholar]
- Martindale D. W., Bruns P. J. Cloning of abundant mRNA species present during conjugation of Tetrahymena thermophila: identification of mRNA species present exclusively during meiosis. Mol Cell Biol. 1983 Oct;3(10):1857–1865. doi: 10.1128/mcb.3.10.1857. [DOI] [PMC free article] [PubMed] [Google Scholar]
- Martindale D. W., Martindale H. M., Bruns P. J. Tetrahymena conjugation-induced genes: structure and organization in macro- and micronuclei. Nucleic Acids Res. 1986 Feb 11;14(3):1341–1354. doi: 10.1093/nar/14.3.1341. [DOI] [PMC free article] [PubMed] [Google Scholar]
- Meyer E., Caron F., Baroin A. Macronuclear structure of the G surface antigen gene of Paramecium primaurelia and direct expression of its repeated epitopes in Escherichia coli. Mol Cell Biol. 1985 Sep;5(9):2414–2422. doi: 10.1128/mcb.5.9.2414. [DOI] [PMC free article] [PubMed] [Google Scholar]
- Nielsen H., Andreasen P. H., Dreisig H., Kristiansen K., Engberg J. An intron in a ribosomal protein gene from Tetrahymena. EMBO J. 1986 Oct;5(10):2711–2717. doi: 10.1002/j.1460-2075.1986.tb04555.x. [DOI] [PMC free article] [PubMed] [Google Scholar]
- Ozaki L. S., Svec P., Nussenzweig R. S., Nussenzweig V., Godson G. N. Structure of the plasmodium knowlesi gene coding for the circumsporozoite protein. Cell. 1983 Oct;34(3):815–822. doi: 10.1016/0092-8674(83)90538-x. [DOI] [PubMed] [Google Scholar]
- Peterson D. S., Wrightsman R. A., Manning J. E. Cloning of a major surface-antigen gene of Trypanosoma cruzi and identification of a nonapeptide repeat. Nature. 1986 Aug 7;322(6079):566–568. doi: 10.1038/322566a0. [DOI] [PubMed] [Google Scholar]
- Prat A., Katinka M., Caron F., Meyer E. Nucleotide sequence of the Paramecium primaurelia G surface protein. A huge protein with a highly periodic structure. J Mol Biol. 1986 May 5;189(1):47–60. doi: 10.1016/0022-2836(86)90380-3. [DOI] [PubMed] [Google Scholar]
- Rodriguez C., Afchain D., Capron A., Dissous C., Santoro F. Major surface protein of Toxoplasma gondii (p30) contains an immunodominant region with repetitive epitopes. Eur J Immunol. 1985 Jul;15(7):747–749. doi: 10.1002/eji.1830150721. [DOI] [PubMed] [Google Scholar]
- Sanger F., Nicklen S., Coulson A. R. DNA sequencing with chain-terminating inhibitors. Proc Natl Acad Sci U S A. 1977 Dec;74(12):5463–5467. doi: 10.1073/pnas.74.12.5463. [DOI] [PMC free article] [PubMed] [Google Scholar]
- Schuler G. D., Cole M. D. GM-CSF and oncogene mRNA stabilities are independently regulated in trans in a mouse monocytic tumor. Cell. 1988 Dec 23;55(6):1115–1122. doi: 10.1016/0092-8674(88)90256-5. [DOI] [PubMed] [Google Scholar]
- Shaw G., Kamen R. A conserved AU sequence from the 3' untranslated region of GM-CSF mRNA mediates selective mRNA degradation. Cell. 1986 Aug 29;46(5):659–667. doi: 10.1016/0092-8674(86)90341-7. [DOI] [PubMed] [Google Scholar]
- Tondravi M. M. DNA rearrangements associated with the H3 surface antigen gene of Tetrahymena thermophila that occur during macronuclear development. Curr Genet. 1988 Dec;14(6):617–626. doi: 10.1007/BF00434088. [DOI] [PubMed] [Google Scholar]
- Wallace R. B., Johnson M. J., Suggs S. V., Miyoshi K., Bhatt R., Itakura K. A set of synthetic oligodeoxyribonucleotide primers for DNA sequencing in the plasmid vector pBR322. Gene. 1981 Dec;16(1-3):21–26. doi: 10.1016/0378-1119(81)90057-3. [DOI] [PubMed] [Google Scholar]