Abstract
In the title compound, C17H12F2N2O2S2, the conformation of the dithiacyclopentane ring is a half-chair, with a total puckering amplitude Q T = 0.460 (1) Å. π–π interactions [centroid–centroid distance = 3.585 (9) Å between the fluorophenyl rings of neighbouring molecules] and C—H⋯N and C—H⋯O interactions help to stabilize the crystal structure and form ladders along the c axis.
Related literature
For the use of dithiolan heterocyclic compounds as broad-spectrum fungicides, see: Tanaka et al. (1976 ▶); Wang et al. (1994 ▶).
Experimental
Crystal data
C17H12F2N2O2S2
M r = 378.41
Triclinic,
a = 9.124 (4) Å
b = 9.757 (4) Å
c = 10.738 (4) Å
α = 104.592 (3)°
β = 110.326 (5)°
γ = 101.194 (4)°
V = 824.6 (6) Å3
Z = 2
Mo Kα radiation
μ = 0.36 mm−1
T = 113 K
0.20 × 0.20 × 0.20 mm
Data collection
Rigaku Saturn724 CCD diffractometer
Absorption correction: multi-scan (CrystalClear; Rigaku/MSC, 2009) ▶ T min = 0.932, T max = 0.932
7057 measured reflections
2896 independent reflections
2098 reflections with I > 2σ(I)
R int = 0.036
Refinement
R[F 2 > 2σ(F 2)] = 0.031
wR(F 2) = 0.076
S = 0.96
2896 reflections
226 parameters
H-atom parameters constrained
Δρmax = 0.39 e Å−3
Δρmin = −0.20 e Å−3
Data collection: CrystalClear-SM Expert (Rigaku/MSC, 2009) ▶; cell refinement: CrystalClear-SM Expert; data reduction: CrystalClear-SM Expert; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: SHELXTL (Sheldrick, 2008 ▶); software used to prepare material for publication: SHELXTL.
Supplementary Material
Crystal structure: contains datablock(s) I, global. DOI: 10.1107/S1600536813007319/hg5300sup1.cif
Structure factors: contains datablock(s) I. DOI: 10.1107/S1600536813007319/hg5300Isup2.hkl
Supplementary material file. DOI: 10.1107/S1600536813007319/hg5300Isup3.cml
Additional supplementary materials: crystallographic information; 3D view; checkCIF report
Table 1. Hydrogen-bond geometry (Å, °).
| D—H⋯A | D—H | H⋯A | D⋯A | D—H⋯A |
|---|---|---|---|---|
| C9—H9B⋯O2i | 0.97 | 2.49 | 3.280 (2) | 138 |
| C10—H10B⋯O2ii | 0.97 | 2.46 | 3.248 (2) | 138 |
| C13—H13A⋯N1iii | 0.93 | 2.50 | 3.424 (3) | 176 |
Symmetry codes: (i)
; (ii)
; (iii)
.
Acknowledgments
The author thanks the Jining University Foundation (No. 2012YYJJ07) for financial support of this work.
supplementary crystallographic information
Comment
Many dithiolan heterocyclic compounds have been widely used as potent and broad-spectrum fungicides (Tanaka et al., 1976; Wang et al., 1994). In order to search for new heterocylic compounds with higher biological activities, we synthesized the (E)-((1,3-dithiolan-2-yl)diazenyl)(3-fluorophenyl)methyl 3-fluorobenzoate and describe its structure here.
In the title compound, C17H12F2N2O2S2, the conformation of the dithiacyclopentane ring (C8—C10/S1—S2) is halfchair, with a total puckering amplitude QT = 0.460 (1) Å. π-π interactions (centroid-to-centroid distances 3.585 (9) Å between the fluorophenyl rings (C12—C17) of neighbouring molecules) and intermolecular C—H···N and C—H···O interactions help to stabilize the crystal structure (Table 1).
Experimental
1.34 g (10 mmol) of (1,3-dithiolan-2-ylidene)hydrazine and 20 mmol triethylamine was dissolved in 15 ml of dichloromethane and stirred at room temperature, 3.17 g (20 mmol) 3-fluorobenzoyl chloride was added dropwise to the mixture. The reaction mixture was stirred vigorously at 273 K for 3 h. The reaction mixture was poured into 200 ml of water and extracted with three 50-ml portions of dichloromethane. The combined extracts were washed with saturated brine, dried over anhydrous sodium sulfate and evaporated on a rotary evaporator to afford the crude product, which was purified by column chromatography to yield the pure product as colorless crystals. Single crystals suitable for X-ray diffraction were obtained through slow evaporation of a solution of the pure title compound in ethanol.
Refinement
All H atoms bonded on carbon were found on difference maps, with C–H = 0.93 or 0.97 Å, and included in the final cycles of refinement using a riding model, with Uiso(H) = 1.2Ueq(C).
Figures
Fig. 1.
View of the title compound showing the atomic numbering and 40% probability displacement ellipsoids.
Crystal data
| C17H12F2N2O2S2 | Z = 2 |
| Mr = 378.41 | F(000) = 388 |
| Triclinic, P1 | Dx = 1.524 Mg m−3 |
| Hall symbol: -P 1 | Mo Kα radiation, λ = 0.71073 Å |
| a = 9.124 (4) Å | Cell parameters from 2617 reflections |
| b = 9.757 (4) Å | θ = 2.2–27.9° |
| c = 10.738 (4) Å | µ = 0.36 mm−1 |
| α = 104.592 (3)° | T = 113 K |
| β = 110.326 (5)° | Block, colorless |
| γ = 101.194 (4)° | 0.20 × 0.20 × 0.20 mm |
| V = 824.6 (6) Å3 |
Data collection
| Rigaku Saturn724 CCD diffractometer | 2896 independent reflections |
| Radiation source: rotating anode | 2098 reflections with I > 2σ(I) |
| Multilayer monochromator | Rint = 0.036 |
| Detector resolution: 14.22 pixels mm-1 | θmax = 25.0°, θmin = 2.2° |
| ω and φ scans | h = −10→10 |
| Absorption correction: multi-scan (CrystalClear; Rigaku/MSC, 2009) | k = −11→11 |
| Tmin = 0.932, Tmax = 0.932 | l = −12→12 |
| 7057 measured reflections |
Refinement
| Refinement on F2 | Primary atom site location: structure-invariant direct methods |
| Least-squares matrix: full | Secondary atom site location: difference Fourier map |
| R[F2 > 2σ(F2)] = 0.031 | Hydrogen site location: inferred from neighbouring sites |
| wR(F2) = 0.076 | H-atom parameters constrained |
| S = 0.96 | w = 1/[σ2(Fo2) + (0.0322P)2] where P = (Fo2 + 2Fc2)/3 |
| 2896 reflections | (Δ/σ)max = 0.001 |
| 226 parameters | Δρmax = 0.39 e Å−3 |
| 0 restraints | Δρmin = −0.20 e Å−3 |
Special details
| Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
| Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger. |
Fractional atomic coordinates and isotropic or equivalent isotropic displacement parameters (Å2)
| x | y | z | Uiso*/Ueq | ||
| S1 | 0.10124 (6) | 0.83442 (5) | 0.59445 (5) | 0.02517 (15) | |
| O1 | −0.12238 (14) | 1.08666 (13) | 0.92674 (12) | 0.0209 (3) | |
| N1 | −0.06721 (17) | 0.92577 (15) | 0.75780 (14) | 0.0183 (4) | |
| F1 | −0.49133 (14) | 0.43408 (13) | 0.61224 (12) | 0.0447 (4) | |
| C1 | −0.3309 (2) | 0.6858 (2) | 0.71390 (18) | 0.0234 (5) | |
| H1B | −0.2714 | 0.6668 | 0.6602 | 0.028* | |
| S2 | 0.31536 (6) | 1.14801 (5) | 0.73274 (5) | 0.02773 (15) | |
| F2 | 0.06577 (13) | 1.50851 (11) | 1.36811 (11) | 0.0320 (3) | |
| O2 | −0.27848 (15) | 1.15266 (14) | 0.75200 (12) | 0.0241 (3) | |
| N2 | 0.05995 (17) | 1.05067 (16) | 0.78311 (15) | 0.0205 (4) | |
| C2 | −0.4583 (2) | 0.5746 (2) | 0.7016 (2) | 0.0300 (5) | |
| C3 | −0.5519 (2) | 0.5965 (2) | 0.7762 (2) | 0.0378 (6) | |
| H3A | −0.6389 | 0.5187 | 0.7637 | 0.045* | |
| C4 | −0.5130 (2) | 0.7376 (3) | 0.8706 (2) | 0.0375 (6) | |
| H4A | −0.5742 | 0.7552 | 0.9231 | 0.045* | |
| C5 | −0.3846 (2) | 0.8530 (2) | 0.88806 (19) | 0.0277 (5) | |
| H5A | −0.3591 | 0.9474 | 0.9524 | 0.033* | |
| C6 | −0.2929 (2) | 0.8280 (2) | 0.80908 (18) | 0.0194 (4) | |
| C7 | −0.1555 (2) | 0.94860 (19) | 0.82551 (17) | 0.0177 (4) | |
| C8 | 0.1433 (2) | 1.01277 (19) | 0.71174 (18) | 0.0196 (4) | |
| C9 | 0.2838 (2) | 0.8807 (2) | 0.56131 (19) | 0.0281 (5) | |
| H9A | 0.3748 | 0.8649 | 0.6302 | 0.034* | |
| H9B | 0.2634 | 0.8176 | 0.4675 | 0.034* | |
| C10 | 0.3251 (2) | 1.0425 (2) | 0.57270 (19) | 0.0273 (5) | |
| H10A | 0.2471 | 1.0544 | 0.4909 | 0.033* | |
| H10B | 0.4345 | 1.0771 | 0.5771 | 0.033* | |
| C11 | −0.1953 (2) | 1.18274 (19) | 0.87559 (19) | 0.0183 (4) | |
| C12 | −0.1586 (2) | 1.32341 (19) | 0.99052 (18) | 0.0176 (4) | |
| C13 | −0.0640 (2) | 1.3463 (2) | 1.13176 (18) | 0.0193 (4) | |
| H13A | −0.0256 | 1.2719 | 1.1584 | 0.023* | |
| C14 | −0.0294 (2) | 1.4828 (2) | 1.23034 (18) | 0.0214 (4) | |
| C15 | −0.0852 (2) | 1.5955 (2) | 1.19552 (19) | 0.0219 (4) | |
| H15A | −0.0584 | 1.6869 | 1.2650 | 0.026* | |
| C16 | −0.1816 (2) | 1.5698 (2) | 1.05533 (19) | 0.0235 (5) | |
| H16A | −0.2215 | 1.6441 | 1.0299 | 0.028* | |
| C17 | −0.2192 (2) | 1.4342 (2) | 0.95261 (19) | 0.0211 (4) | |
| H17A | −0.2847 | 1.4171 | 0.8584 | 0.025* |
Atomic displacement parameters (Å2)
| U11 | U22 | U33 | U12 | U13 | U23 | |
| S1 | 0.0288 (3) | 0.0228 (3) | 0.0234 (3) | 0.0054 (2) | 0.0145 (2) | 0.0038 (2) |
| O1 | 0.0265 (7) | 0.0204 (7) | 0.0161 (7) | 0.0112 (6) | 0.0082 (6) | 0.0048 (6) |
| N1 | 0.0181 (8) | 0.0184 (8) | 0.0171 (8) | 0.0044 (7) | 0.0065 (7) | 0.0062 (7) |
| F1 | 0.0460 (8) | 0.0304 (7) | 0.0372 (7) | −0.0090 (6) | 0.0073 (6) | 0.0089 (6) |
| C1 | 0.0196 (10) | 0.0296 (11) | 0.0191 (10) | 0.0050 (9) | 0.0059 (9) | 0.0106 (9) |
| S2 | 0.0240 (3) | 0.0262 (3) | 0.0290 (3) | 0.0009 (2) | 0.0132 (2) | 0.0055 (2) |
| F2 | 0.0423 (7) | 0.0278 (6) | 0.0184 (6) | 0.0112 (5) | 0.0067 (5) | 0.0041 (5) |
| O2 | 0.0255 (7) | 0.0278 (7) | 0.0168 (7) | 0.0102 (6) | 0.0054 (6) | 0.0076 (6) |
| N2 | 0.0213 (9) | 0.0163 (8) | 0.0221 (8) | 0.0036 (7) | 0.0093 (7) | 0.0052 (7) |
| C2 | 0.0285 (12) | 0.0274 (11) | 0.0230 (11) | 0.0003 (9) | 0.0028 (10) | 0.0088 (10) |
| C3 | 0.0219 (12) | 0.0488 (15) | 0.0404 (13) | −0.0011 (11) | 0.0090 (11) | 0.0265 (12) |
| C4 | 0.0287 (12) | 0.0591 (16) | 0.0381 (13) | 0.0155 (11) | 0.0211 (11) | 0.0265 (12) |
| C5 | 0.0259 (11) | 0.0374 (12) | 0.0253 (11) | 0.0146 (10) | 0.0111 (10) | 0.0156 (10) |
| C6 | 0.0178 (10) | 0.0271 (11) | 0.0146 (10) | 0.0087 (8) | 0.0051 (8) | 0.0101 (9) |
| C7 | 0.0204 (10) | 0.0196 (10) | 0.0119 (9) | 0.0090 (8) | 0.0040 (8) | 0.0056 (8) |
| C8 | 0.0211 (10) | 0.0195 (10) | 0.0166 (10) | 0.0067 (8) | 0.0050 (9) | 0.0074 (8) |
| C9 | 0.0277 (12) | 0.0366 (12) | 0.0230 (11) | 0.0118 (10) | 0.0136 (10) | 0.0092 (10) |
| C10 | 0.0207 (10) | 0.0397 (12) | 0.0225 (11) | 0.0069 (9) | 0.0100 (9) | 0.0130 (10) |
| C11 | 0.0157 (10) | 0.0218 (10) | 0.0224 (11) | 0.0063 (8) | 0.0110 (9) | 0.0111 (9) |
| C12 | 0.0149 (10) | 0.0203 (10) | 0.0200 (10) | 0.0037 (8) | 0.0102 (8) | 0.0080 (8) |
| C13 | 0.0195 (10) | 0.0205 (10) | 0.0227 (10) | 0.0079 (8) | 0.0110 (9) | 0.0106 (9) |
| C14 | 0.0228 (11) | 0.0244 (11) | 0.0169 (10) | 0.0065 (9) | 0.0090 (9) | 0.0065 (9) |
| C15 | 0.0238 (11) | 0.0172 (10) | 0.0254 (11) | 0.0050 (8) | 0.0141 (9) | 0.0041 (9) |
| C16 | 0.0245 (11) | 0.0217 (10) | 0.0301 (11) | 0.0103 (9) | 0.0150 (10) | 0.0110 (9) |
| C17 | 0.0204 (10) | 0.0242 (10) | 0.0222 (10) | 0.0073 (8) | 0.0102 (9) | 0.0114 (9) |
Geometric parameters (Å, º)
| S1—C8 | 1.7499 (19) | C5—C6 | 1.395 (2) |
| S1—C9 | 1.8178 (18) | C5—H5A | 0.9300 |
| O1—C11 | 1.368 (2) | C6—C7 | 1.469 (2) |
| O1—C7 | 1.401 (2) | C9—C10 | 1.513 (3) |
| N1—C7 | 1.274 (2) | C9—H9A | 0.9700 |
| N1—N2 | 1.4036 (19) | C9—H9B | 0.9700 |
| F1—C2 | 1.366 (2) | C10—H10A | 0.9700 |
| C1—C2 | 1.370 (2) | C10—H10B | 0.9700 |
| C1—C6 | 1.394 (2) | C11—C12 | 1.483 (2) |
| C1—H1B | 0.9300 | C12—C17 | 1.392 (3) |
| S2—C8 | 1.7480 (18) | C12—C13 | 1.393 (2) |
| S2—C10 | 1.8088 (19) | C13—C14 | 1.374 (2) |
| F2—C14 | 1.357 (2) | C13—H13A | 0.9300 |
| O2—C11 | 1.200 (2) | C14—C15 | 1.378 (3) |
| N2—C8 | 1.294 (2) | C15—C16 | 1.381 (2) |
| C2—C3 | 1.370 (3) | C15—H15A | 0.9300 |
| C3—C4 | 1.381 (3) | C16—C17 | 1.382 (2) |
| C3—H3A | 0.9300 | C16—H16A | 0.9300 |
| C4—C5 | 1.380 (3) | C17—H17A | 0.9300 |
| C4—H4A | 0.9300 | ||
| C8—S1—C9 | 95.19 (8) | S1—C9—H9A | 110.1 |
| C11—O1—C7 | 115.41 (14) | C10—C9—H9B | 110.1 |
| C7—N1—N2 | 115.89 (14) | S1—C9—H9B | 110.1 |
| C2—C1—C6 | 118.25 (17) | H9A—C9—H9B | 108.4 |
| C2—C1—H1B | 120.9 | C9—C10—S2 | 107.36 (12) |
| C6—C1—H1B | 120.9 | C9—C10—H10A | 110.2 |
| C8—S2—C10 | 94.44 (8) | S2—C10—H10A | 110.2 |
| C8—N2—N1 | 110.12 (14) | C9—C10—H10B | 110.2 |
| F1—C2—C1 | 118.15 (17) | S2—C10—H10B | 110.2 |
| F1—C2—C3 | 118.45 (17) | H10A—C10—H10B | 108.5 |
| C1—C2—C3 | 123.39 (19) | O2—C11—O1 | 122.43 (17) |
| C2—C3—C4 | 117.95 (18) | O2—C11—C12 | 125.87 (18) |
| C2—C3—H3A | 121.0 | O1—C11—C12 | 111.70 (15) |
| C4—C3—H3A | 121.0 | C17—C12—C13 | 120.61 (17) |
| C5—C4—C3 | 120.84 (18) | C17—C12—C11 | 117.79 (17) |
| C5—C4—H4A | 119.6 | C13—C12—C11 | 121.59 (18) |
| C3—C4—H4A | 119.6 | C14—C13—C12 | 117.59 (18) |
| C4—C5—C6 | 119.96 (18) | C14—C13—H13A | 121.2 |
| C4—C5—H5A | 120.0 | C12—C13—H13A | 121.2 |
| C6—C5—H5A | 120.0 | F2—C14—C13 | 118.49 (18) |
| C1—C6—C5 | 119.59 (17) | F2—C14—C15 | 118.47 (16) |
| C1—C6—C7 | 119.26 (15) | C13—C14—C15 | 123.03 (18) |
| C5—C6—C7 | 121.15 (16) | C14—C15—C16 | 118.59 (17) |
| N1—C7—O1 | 122.72 (15) | C14—C15—H15A | 120.7 |
| N1—C7—C6 | 121.68 (16) | C16—C15—H15A | 120.7 |
| O1—C7—C6 | 115.47 (14) | C15—C16—C17 | 120.32 (19) |
| N2—C8—S2 | 118.67 (14) | C15—C16—H16A | 119.8 |
| N2—C8—S1 | 125.76 (13) | C17—C16—H16A | 119.8 |
| S2—C8—S1 | 115.57 (10) | C16—C17—C12 | 119.84 (18) |
| C10—C9—S1 | 108.17 (13) | C16—C17—H17A | 120.1 |
| C10—C9—H9A | 110.1 | C12—C17—H17A | 120.1 |
| C7—N1—N2—C8 | 178.22 (16) | C10—S2—C8—S1 | 17.80 (12) |
| C6—C1—C2—F1 | −177.56 (17) | C9—S1—C8—N2 | −174.67 (17) |
| C6—C1—C2—C3 | 1.1 (3) | C9—S1—C8—S2 | 4.65 (12) |
| F1—C2—C3—C4 | 177.36 (18) | C8—S1—C9—C10 | −31.34 (14) |
| C1—C2—C3—C4 | −1.3 (3) | S1—C9—C10—S2 | 46.97 (15) |
| C2—C3—C4—C5 | 0.5 (3) | C8—S2—C10—C9 | −38.84 (15) |
| C3—C4—C5—C6 | 0.4 (3) | C7—O1—C11—O2 | −1.9 (2) |
| C2—C1—C6—C5 | −0.1 (3) | C7—O1—C11—C12 | 177.88 (12) |
| C2—C1—C6—C7 | 179.21 (16) | O2—C11—C12—C17 | −3.1 (3) |
| C4—C5—C6—C1 | −0.6 (3) | O1—C11—C12—C17 | 177.18 (14) |
| C4—C5—C6—C7 | −179.95 (17) | O2—C11—C12—C13 | 178.22 (16) |
| N2—N1—C7—O1 | −4.3 (2) | O1—C11—C12—C13 | −1.5 (2) |
| N2—N1—C7—C6 | 179.92 (15) | C17—C12—C13—C14 | −1.8 (2) |
| C11—O1—C7—N1 | 89.6 (2) | C11—C12—C13—C14 | 176.82 (14) |
| C11—O1—C7—C6 | −94.45 (18) | C12—C13—C14—F2 | −178.49 (14) |
| C1—C6—C7—N1 | −1.9 (3) | C12—C13—C14—C15 | 0.6 (3) |
| C5—C6—C7—N1 | 177.38 (17) | F2—C14—C15—C16 | 179.79 (15) |
| C1—C6—C7—O1 | −177.96 (16) | C13—C14—C15—C16 | 0.7 (3) |
| C5—C6—C7—O1 | 1.4 (2) | C14—C15—C16—C17 | −0.8 (3) |
| N1—N2—C8—S2 | −176.83 (12) | C15—C16—C17—C12 | −0.4 (3) |
| N1—N2—C8—S1 | 2.5 (2) | C13—C12—C17—C16 | 1.8 (2) |
| C10—S2—C8—N2 | −162.83 (16) | C11—C12—C17—C16 | −176.95 (15) |
Hydrogen-bond geometry (Å, º)
| D—H···A | D—H | H···A | D···A | D—H···A |
| C9—H9B···O2i | 0.97 | 2.49 | 3.280 (2) | 138 |
| C10—H10B···O2ii | 0.97 | 2.46 | 3.248 (2) | 138 |
| C13—H13A···N1iii | 0.93 | 2.50 | 3.424 (3) | 176 |
Symmetry codes: (i) −x, −y+2, −z+1; (ii) x+1, y, z; (iii) −x, −y+2, −z+2.
Footnotes
Supplementary data and figures for this paper are available from the IUCr electronic archives (Reference: HG5300).
References
- Rigaku/MSC (2009). CrystalClear-SM Expert and CrystalStructure Rigaku/MSC, The Woodlands, Texas, USA.
- Sheldrick, G. M. (2008). Acta Cryst. A64, 112–122. [DOI] [PubMed]
- Tanaka, H., Araki, F., Harada, T. & Kurono, H. (1976). Jpn Patent No. 51151326A.
- Wang, Y., Li, Z. H. & Gao, N. (1994). Yaoxue Xuebao, 29, 78–80.
Associated Data
This section collects any data citations, data availability statements, or supplementary materials included in this article.
Supplementary Materials
Crystal structure: contains datablock(s) I, global. DOI: 10.1107/S1600536813007319/hg5300sup1.cif
Structure factors: contains datablock(s) I. DOI: 10.1107/S1600536813007319/hg5300Isup2.hkl
Supplementary material file. DOI: 10.1107/S1600536813007319/hg5300Isup3.cml
Additional supplementary materials: crystallographic information; 3D view; checkCIF report

