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Acta Crystallographica Section E: Structure Reports Online logoLink to Acta Crystallographica Section E: Structure Reports Online
. 2013 Apr 13;69(Pt 5):o705. doi: 10.1107/S1600536813009197

1-[(E)-Anthracen-9-yl­methyl­idene]-2-(2,4-di­nitro­phen­yl)hydrazine

Joana de A e Silva a, Consuelo Yuste-Vivas b,*, Abilio J F N Sobral a, Manuela Ramos Silva b
PMCID: PMC3648239  PMID: 23723859

Abstract

In the title Schiff base, C21H14N4O4, the dihedral angle between the two nitro groups and the central benzene ring are 83.6 (5) and 2.6 (6)°. The anthracene ring system and the benzene ring make a dihedral angle of 0.7 (2)°. Intra­molecular N—H⋯O and C—H⋯N hydrogen bonds occur. In the crystal, C—H⋯O hydrogen bonds link the mol­ecules, forming chains along the b-axis direction.

Related literature  

For general background to hydrazone derivatives, see: Kahwa et al. (1986). For the structures of 2,4-di­nitro­phenyl­hydrazine and 9-anthraldehyde, see: Okabe et al. (1993) and Trotter (1959), respectively. graphic file with name e-69-0o705-scheme1.jpg

Experimental  

Crystal data  

  • C21H14N4O4

  • M r = 386.36

  • Orthorhombic, Inline graphic

  • a = 5.6355 (4) Å

  • b = 8.1597 (5) Å

  • c = 36.794 (2) Å

  • V = 1691.95 (19) Å3

  • Z = 4

  • Mo Kα radiation

  • μ = 0.11 mm−1

  • T = 293 K

  • 0.08 × 0.02 × 0.01 mm

Data collection  

  • Bruker APEXII CCD area-detector diffractometer

  • Absorption correction: multi-scan (SADABS; Sheldrick, 2000) T min = 0.764, T max = 0.999

  • 18174 measured reflections

  • 3708 independent reflections

  • 1466 reflections with I > 2σ(I)

  • R int = 0.132

Refinement  

  • R[F 2 > 2σ(F 2)] = 0.074

  • wR(F 2) = 0.242

  • S = 0.88

  • 3708 reflections

  • 263 parameters

  • H-atom parameters constrained

  • Δρmax = 0.25 e Å−3

  • Δρmin = −0.22 e Å−3

Data collection: APEX2 (Bruker, 2003); cell refinement: SAINT (Bruker, 2003); data reduction: SAINT; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008); molecular graphics: DIAMOND (Brandenburg, 2006); software used to prepare material for publication: WinGX publication routines (Farrugia, 2012).

Supplementary Material

Crystal structure: contains datablock(s) I, global. DOI: 10.1107/S1600536813009197/bt6891sup1.cif

e-69-0o705-sup1.cif (23.7KB, cif)

Structure factors: contains datablock(s) I. DOI: 10.1107/S1600536813009197/bt6891Isup2.hkl

e-69-0o705-Isup2.hkl (178.1KB, hkl)

Supplementary material file. DOI: 10.1107/S1600536813009197/bt6891Isup3.cml

Additional supplementary materials: crystallographic information; 3D view; checkCIF report

Table 1. Hydrogen-bond geometry (Å, °).

D—H⋯A D—H H⋯A DA D—H⋯A
N3—H03⋯O4 0.86 1.99 2.617 (7) 129
C11—H11⋯O4i 0.93 2.47 3.251 (8) 142
C20—H20⋯N4 0.93 2.25 2.894 (8) 126

Symmetry code: (i) Inline graphic.

Acknowledgments

This work was supported by the Fundo Europeu de Desenvolvimento Regional-QREN-Compete through projects SFRH/BD/61637/2009, PTDC/AAC-CLI/098308/2008, PTDC/AAC-CLI/118092/2010, PTDC/FIS/102284/2008 and PEst-C/FIS/UI0036/2011 – Fundação para a Ciência e Tecnologia (FCT).

supplementary crystallographic information

Comment

The title compound was synthesized as part of an investigation of the coordination properties of Schiff bases functioning as ligands. Metal complexes based on Schiff bases have been developed in biology and macromolecular chemistry in the last years (Kahwa et al., 1986).

The three dimensional arrangement of the molecules is held together by weak hydrogen bonds interactions between C—H and nitro-oxygen atoms.

Each unit is almost planar with a maximum deviation of 0.179 (6) A for O2, bond lengths varying in the ranges of [1.331 (9)–1.463 (8), 1.215 (7)–1.242 (6), 1.294 (7)–1.461 (8) and 1.389 (7) A for C—C, N—O, C—N and N—N respectively] and bond angles agreeing with those for the initial ligands. Molecules grow along the a-axis giving layers in the plane bc with an ABAB disposition, as well as each A and B layers are actually an alternating double layer. Two neighbor units of compound 1 create an angle of 68.92 (3)° between them along the c-axis.

The angle between the two nitro groups and the central benzene ring by 83.6 (5) and 2.6 (6)°, and the angle between these two nitro groups is 11.1 (7)°. Dihedral angle between the two aromatic parts of the molecule are 179.7 (6) and -171.7 (6)°, for C8—C7—N4—N3 and C7—N4—N3—C1 respectively.

Experimental

All reagents were obtained from commercial sources and used wirh no further purifications.

The compound was obtained when 1 g of (2,4-dinitrophenyl) hydrazine was dissolved in 5 mL of concentrated H2SO4.7.5 mL of water where added very slowly to the solution, after this were also added 25 mL of ethanol. In other flask, 4 mL of ethanol 0.05 g of anthracene-9-carbaldehyde where dissolved, and then, 1.80 mL of (2,4-dinitrophenyl)hydrazine was added to the solution. The two solutions were mixed and left to stand, at room temperature, for 24 h and then the solid compound was filtered., 049 g (52,7%)of the final product were obtained.

Refinement

All H atoms could be located in a difference Fourier synthesis but were placed in calculated positions and refined as riding on their parent atoms, using SHELXL97 (Sheldrick, 2008) defaults. Due to the absence of anomalous scatterers, the absolute structure could not be determined.

Figures

Fig. 1.

Fig. 1.

: Asymmetric unit of the title compound, showing the atom-labelling scheme and displacement ellipsoids drawn at the 50% probability level.

Fig. 2.

Fig. 2.

: View of the crystal packing of the title compound, projected along c.

Fig. 3.

Fig. 3.

: A view showing part of the three-dimensional supramolecular network linked by weak hydrogen-bond interactions (yellow dotted lines).

Crystal data

C21H14N4O4 F(000) = 146
Mr = 386.36 Dx = 1.517 Mg m3
Orthorhombic, P212121 Mo Kα radiation, λ = 0.71073 Å
Hall symbol: P 2ac 2ab Cell parameters from 1164 reflections
a = 5.6355 (4) Å θ = 3.0–18.8°
b = 8.1597 (5) Å µ = 0.11 mm1
c = 36.794 (2) Å T = 293 K
V = 1691.95 (19) Å3 Needle, colorless
Z = 4 0.08 × 0.02 × 0.01 mm

Data collection

Bruker APEXII CCD area-detector diffractometer 3708 independent reflections
Radiation source: fine-focus sealed tube 1466 reflections with I > 2σ(I)
Graphite monochromator Rint = 0.132
φ and ω scans θmax = 27.3°, θmin = 3.3°
Absorption correction: multi-scan (SADABS; Sheldrick, 2000) h = −7→7
Tmin = 0.764, Tmax = 0.999 k = −10→9
18174 measured reflections l = −46→46

Refinement

Refinement on F2 Secondary atom site location: difference Fourier map
Least-squares matrix: full Hydrogen site location: inferred from neighbouring sites
R[F2 > 2σ(F2)] = 0.074 H-atom parameters constrained
wR(F2) = 0.242 w = 1/[σ2(Fo2) + (0.1212P)2] where P = (Fo2 + 2Fc2)/3
S = 0.88 (Δ/σ)max < 0.001
3708 reflections Δρmax = 0.25 e Å3
263 parameters Δρmin = −0.22 e Å3
0 restraints Extinction correction: SHELXL, Fc*=kFc[1+0.001xFc2λ3/sin(2θ)]-1/4
Primary atom site location: structure-invariant direct methods Extinction coefficient: 0.036 (5)

Special details

Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.

Fractional atomic coordinates and isotropic or equivalent isotropic displacement parameters (Å2)

x y z Uiso*/Ueq
O1 0.2253 (10) 0.1891 (7) 0.26020 (13) 0.0951 (18)
O2 −0.0875 (10) 0.1412 (7) 0.22882 (14) 0.0932 (17)
O3 −0.1033 (8) 0.2666 (5) 0.10426 (11) 0.0669 (13)
O4 0.1605 (8) 0.4177 (5) 0.07843 (12) 0.0703 (13)
N1 0.1114 (12) 0.2008 (7) 0.23234 (16) 0.0725 (16)
N2 0.0789 (10) 0.3493 (6) 0.10576 (14) 0.0558 (14)
N3 0.5138 (9) 0.5396 (6) 0.11586 (14) 0.0559 (14)
H03 0.4470 0.5385 0.0948 0.067*
N4 0.7204 (9) 0.6275 (6) 0.12078 (13) 0.0561 (14)
C1 0.4148 (10) 0.4550 (7) 0.14367 (16) 0.0475 (14)
C2 0.2018 (10) 0.3647 (7) 0.13979 (15) 0.0481 (15)
C3 0.1020 (12) 0.2848 (7) 0.16947 (17) 0.0554 (16)
H3 −0.0398 0.2275 0.1671 0.066*
C4 0.2148 (11) 0.2921 (8) 0.20181 (16) 0.0536 (16)
C5 0.4246 (11) 0.3756 (8) 0.20701 (17) 0.0582 (17)
H5 0.4983 0.3771 0.2296 0.070*
C6 0.5215 (11) 0.4563 (8) 0.17795 (17) 0.0562 (16)
H6 0.6626 0.5137 0.1811 0.067*
C7 0.7784 (10) 0.7172 (7) 0.09321 (16) 0.0497 (15)
H7 0.6795 0.7136 0.0730 0.060*
C8 0.9857 (10) 0.8234 (7) 0.09117 (16) 0.0490 (15)
C9 1.0328 (10) 0.8946 (7) 0.05641 (16) 0.0482 (15)
C10 0.8823 (13) 0.8738 (8) 0.02552 (16) 0.0609 (17)
H10 0.7477 0.8083 0.0274 0.073*
C11 0.9330 (12) 0.9482 (8) −0.00647 (18) 0.0667 (19)
H11 0.8285 0.9355 −0.0258 0.080*
C12 1.1380 (13) 1.0440 (8) −0.0115 (2) 0.070 (2)
H12 1.1724 1.0905 −0.0339 0.084*
C13 1.2834 (13) 1.0664 (7) 0.01730 (19) 0.0652 (18)
H13 1.4182 1.1309 0.0145 0.078*
C14 1.2364 (12) 0.9944 (7) 0.05161 (17) 0.0519 (15)
C15 1.3859 (11) 1.0226 (7) 0.08107 (18) 0.0583 (17)
H15 1.5209 1.0862 0.0777 0.070*
C21 1.1340 (10) 0.8580 (7) 0.12098 (15) 0.0466 (14)
C16 1.3403 (10) 0.9587 (7) 0.11560 (17) 0.0525 (16)
C17 1.4973 (12) 0.9911 (8) 0.14472 (18) 0.0591 (17)
H17 1.6304 1.0560 0.1407 0.071*
C18 1.4578 (12) 0.9301 (8) 0.1779 (2) 0.0660 (19)
H18 1.5653 0.9491 0.1966 0.079*
C19 1.2511 (12) 0.8366 (8) 0.18424 (18) 0.0635 (18)
H19 1.2202 0.7970 0.2075 0.076*
C20 1.0978 (12) 0.8040 (8) 0.15704 (17) 0.0604 (17)
H20 0.9623 0.7433 0.1622 0.073*

Atomic displacement parameters (Å2)

U11 U22 U33 U12 U13 U23
O1 0.097 (4) 0.130 (5) 0.059 (3) −0.006 (4) −0.007 (3) 0.025 (3)
O2 0.080 (4) 0.121 (4) 0.079 (3) −0.027 (4) 0.010 (3) 0.016 (3)
O3 0.056 (3) 0.074 (3) 0.070 (3) −0.017 (3) −0.005 (2) 0.000 (2)
O4 0.069 (3) 0.085 (3) 0.057 (3) −0.020 (3) 0.000 (2) 0.010 (2)
N1 0.071 (4) 0.086 (4) 0.061 (4) 0.004 (4) 0.007 (4) 0.004 (3)
N2 0.054 (3) 0.057 (3) 0.057 (3) 0.005 (3) −0.004 (3) −0.002 (3)
N3 0.053 (3) 0.055 (3) 0.059 (3) −0.004 (3) 0.002 (3) −0.001 (3)
N4 0.045 (3) 0.059 (3) 0.065 (3) −0.001 (3) 0.002 (3) 0.001 (3)
C1 0.043 (3) 0.050 (3) 0.050 (4) 0.000 (3) 0.000 (3) 0.001 (3)
C2 0.044 (4) 0.052 (4) 0.048 (3) −0.003 (3) −0.002 (3) 0.002 (3)
C3 0.047 (3) 0.054 (4) 0.066 (4) −0.002 (3) 0.008 (3) −0.008 (3)
C4 0.052 (4) 0.065 (4) 0.045 (4) −0.002 (4) 0.003 (3) 0.004 (3)
C5 0.056 (4) 0.068 (4) 0.051 (4) 0.006 (4) −0.005 (3) −0.004 (3)
C6 0.050 (4) 0.058 (4) 0.061 (4) −0.004 (3) −0.005 (3) −0.001 (3)
C7 0.049 (4) 0.051 (4) 0.049 (3) −0.001 (3) 0.003 (3) −0.002 (3)
C8 0.044 (3) 0.039 (3) 0.064 (4) −0.002 (3) 0.006 (3) −0.001 (3)
C9 0.045 (3) 0.042 (3) 0.059 (4) 0.006 (3) 0.001 (3) −0.001 (3)
C10 0.063 (4) 0.063 (4) 0.056 (4) 0.001 (4) −0.002 (4) 0.002 (3)
C11 0.064 (5) 0.076 (5) 0.060 (4) 0.006 (4) −0.004 (4) 0.005 (4)
C12 0.084 (5) 0.062 (4) 0.065 (4) 0.003 (4) 0.014 (4) 0.011 (4)
C13 0.072 (4) 0.045 (4) 0.079 (5) −0.007 (4) 0.014 (4) 0.007 (3)
C14 0.058 (4) 0.040 (3) 0.058 (4) −0.002 (3) 0.002 (3) −0.001 (3)
C15 0.053 (4) 0.046 (4) 0.076 (5) 0.000 (3) 0.013 (4) −0.002 (3)
C21 0.044 (3) 0.040 (3) 0.055 (4) 0.001 (3) 0.002 (3) −0.003 (3)
C16 0.043 (4) 0.045 (3) 0.069 (4) 0.009 (3) 0.000 (3) −0.007 (3)
C17 0.046 (4) 0.060 (4) 0.072 (5) −0.002 (3) −0.004 (4) −0.006 (4)
C18 0.057 (4) 0.070 (5) 0.071 (5) 0.007 (4) −0.010 (4) −0.006 (4)
C19 0.067 (5) 0.065 (4) 0.059 (4) 0.007 (4) −0.001 (4) 0.006 (3)
C20 0.057 (4) 0.058 (4) 0.067 (4) −0.006 (4) 0.000 (4) −0.001 (3)

Geometric parameters (Å, º)

O1—N1 1.214 (7) C9—C14 1.418 (8)
O2—N1 1.229 (7) C9—C10 1.428 (8)
O3—N2 1.230 (6) C10—C11 1.355 (8)
O4—N2 1.238 (6) C10—H10 0.9300
N1—C4 1.469 (8) C11—C12 1.407 (9)
N2—C2 1.436 (7) C11—H11 0.9300
N3—C1 1.355 (7) C12—C13 1.351 (9)
N3—N4 1.379 (6) C12—H12 0.9300
N3—H03 0.8600 C13—C14 1.418 (8)
N4—C7 1.293 (7) C13—H13 0.9300
C1—C6 1.397 (8) C14—C15 1.392 (8)
C1—C2 1.416 (8) C15—C16 1.397 (8)
C2—C3 1.390 (8) C15—H15 0.9300
C3—C4 1.350 (8) C21—C20 1.413 (7)
C3—H3 0.9300 C21—C16 1.437 (8)
C4—C5 1.378 (8) C16—C17 1.414 (8)
C5—C6 1.369 (8) C17—C18 1.337 (9)
C5—H5 0.9300 C17—H17 0.9300
C6—H6 0.9300 C18—C19 1.412 (9)
C7—C8 1.456 (7) C18—H18 0.9300
C7—H7 0.9300 C19—C20 1.348 (8)
C8—C21 1.408 (8) C19—H19 0.9300
C8—C9 1.430 (8) C20—H20 0.9300
O1—N1—O2 122.7 (6) C11—C10—C9 120.8 (7)
O1—N1—C4 118.4 (6) C11—C10—H10 119.6
O2—N1—C4 118.8 (6) C9—C10—H10 119.6
O3—N2—O4 121.4 (5) C10—C11—C12 122.4 (7)
O3—N2—C2 119.3 (5) C10—C11—H11 118.8
O4—N2—C2 119.3 (5) C12—C11—H11 118.8
C1—N3—N4 120.9 (5) C13—C12—C11 118.1 (6)
C1—N3—H03 119.6 C13—C12—H12 121.0
N4—N3—H03 119.6 C11—C12—H12 121.0
C7—N4—N3 113.9 (5) C12—C13—C14 121.9 (7)
N3—C1—C6 120.0 (6) C12—C13—H13 119.0
N3—C1—C2 122.6 (6) C14—C13—H13 119.0
C6—C1—C2 117.4 (5) C15—C14—C13 120.8 (6)
C3—C2—C1 120.5 (5) C15—C14—C9 119.2 (6)
C3—C2—N2 116.7 (5) C13—C14—C9 120.0 (6)
C1—C2—N2 122.8 (5) C14—C15—C16 122.4 (6)
C4—C3—C2 118.8 (6) C14—C15—H15 118.8
C4—C3—H3 120.6 C16—C15—H15 118.8
C2—C3—H3 120.6 C8—C21—C20 125.7 (6)
C3—C4—C5 123.2 (6) C8—C21—C16 119.2 (5)
C3—C4—N1 117.7 (6) C20—C21—C16 115.1 (6)
C5—C4—N1 119.0 (6) C15—C16—C17 120.3 (6)
C6—C5—C4 118.1 (6) C15—C16—C21 119.2 (6)
C6—C5—H5 120.9 C17—C16—C21 120.6 (6)
C4—C5—H5 120.9 C18—C17—C16 121.2 (6)
C5—C6—C1 122.0 (6) C18—C17—H17 119.4
C5—C6—H6 119.0 C16—C17—H17 119.4
C1—C6—H6 119.0 C17—C18—C19 119.3 (6)
N4—C7—C8 125.5 (6) C17—C18—H18 120.4
N4—C7—H7 117.3 C19—C18—H18 120.4
C8—C7—H7 117.3 C20—C19—C18 120.8 (6)
C21—C8—C9 120.4 (5) C20—C19—H19 119.6
C21—C8—C7 123.7 (5) C18—C19—H19 119.6
C9—C8—C7 115.9 (5) C19—C20—C21 122.9 (6)
C14—C9—C10 116.7 (5) C19—C20—H20 118.6
C14—C9—C8 119.7 (5) C21—C20—H20 118.6
C10—C9—C8 123.6 (6)

Hydrogen-bond geometry (Å, º)

D—H···A D—H H···A D···A D—H···A
N3—H03···O4 0.86 1.99 2.617 (7) 129
C11—H11···O4i 0.93 2.47 3.251 (8) 142
C20—H20···N4 0.93 2.25 2.894 (8) 126

Symmetry code: (i) x+1/2, −y+3/2, −z.

Footnotes

Supplementary data and figures for this paper are available from the IUCr electronic archives (Reference: BT6891).

References

  1. Brandenburg, K. (2006). DIAMOND Crystal Impact GbR, Bonn, Germany.
  2. Bruker (2003). APEX2 and SAINT Bruker AXS Inc., Madison, Winsconsin, USA.
  3. Farrugia, L. J. (2012). J. Appl. Cryst. 45, 849–854.
  4. Kahwa, I. A., Selbin, J., Hsieh, T. C.-Y. & Laine, R. A. (1986). Inorg. Chim. Acta, 118, 179–185.
  5. Okabe, N., Nakamura, T. & Fukuda, H. (1993). Acta Cryst. C49, 1678–1680.
  6. Sheldrick, G. M. (2000). SADABS University of Göttingen, Germany.
  7. Sheldrick, G. M. (2008). Acta Cryst. A64, 112–122. [DOI] [PubMed]
  8. Trotter, J. (1959). Acta Cryst. 12, 922–928.

Associated Data

This section collects any data citations, data availability statements, or supplementary materials included in this article.

Supplementary Materials

Crystal structure: contains datablock(s) I, global. DOI: 10.1107/S1600536813009197/bt6891sup1.cif

e-69-0o705-sup1.cif (23.7KB, cif)

Structure factors: contains datablock(s) I. DOI: 10.1107/S1600536813009197/bt6891Isup2.hkl

e-69-0o705-Isup2.hkl (178.1KB, hkl)

Supplementary material file. DOI: 10.1107/S1600536813009197/bt6891Isup3.cml

Additional supplementary materials: crystallographic information; 3D view; checkCIF report


Articles from Acta Crystallographica Section E: Structure Reports Online are provided here courtesy of International Union of Crystallography

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