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Acta Crystallographica Section E: Structure Reports Online logoLink to Acta Crystallographica Section E: Structure Reports Online
. 2013 Apr 13;69(Pt 5):o731. doi: 10.1107/S1600536813009112

(1R,2S,5R)-(–)-Menthyl (S)-2-(methoxy­carbonyl)­benzene­sulfinate

Maria Altamura a, Antonio Guidi a, Loic Jierry b, Paola Paoli c,*, Patrizia Rossi c
PMCID: PMC3648263  PMID: 23723883

Abstract

In the title chiral sulfinic acid ester, C18H26O4S, the cyclo­hexane ring of the menthyl fragment adopts a chair conformation. The mol­ecular shape is defined by the dihedral angle of 47.87 (8)° between the mean planes of the cyclo­hexane and benzene rings. In the crystal, mol­ecules related by the screw axis are connected into chains along [010] by weak Car—H⋯O=S contacts.

Related literature  

For the synthesis of the title compound, see: Klunder & Sharpless (1987) and of chiral sulfoxides, see: Drabowicz et al. (1982); Solladié et al. (1987). For applications of menthol in synthetic chemistry, see Oertling et al. (2007). For structural studies of analogous chiral sulfinic acid esters, see: Mariz et al. (2010); Heinemann et al. (2007); Cherkaoui & Nicoud (1995).graphic file with name e-69-0o731-scheme1.jpg

Experimental  

Crystal data  

  • C18H26O4S

  • M r = 338.45

  • Monoclinic, Inline graphic

  • a = 9.7918 (2) Å

  • b = 9.3938 (2) Å

  • c = 10.6998 (2) Å

  • β = 112.176 (2)°

  • V = 911.39 (3) Å3

  • Z = 2

  • Cu Kα radiation

  • μ = 1.72 mm−1

  • T = 150 K

  • 0.26 × 0.22 × 0.08 mm

Data collection  

  • Oxford Diffraction Xcalibur PX diffractometer

  • Absorption correction: multi-scan (CrysAlis RED; Oxford Diffraction, 2006) T min = 0.660, T max = 0.872

  • 4681 measured reflections

  • 2354 independent reflections

  • 2115 reflections with I > 2σ(I)

  • R int = 0.021

Refinement  

  • R[F 2 > 2σ(F 2)] = 0.031

  • wR(F 2) = 0.078

  • S = 1.07

  • 2354 reflections

  • 209 parameters

  • 1 restraint

  • H-atom parameters constrained

  • Δρmax = 0.15 e Å−3

  • Δρmin = −0.22 e Å−3

  • Absolute structure: Flack (1983), 767 Friedel pairs

  • Flack parameter: 0.038 (18)

Data collection: CrysAlis CCD (Oxford Diffraction, 2006); cell refinement: CrysAlis RED (Oxford Diffraction, 2006); data reduction: CrysAlis RED; program(s) used to solve structure: SIR97 (Altomare et al., 1999); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008); molecular graphics: ORTEP-3 for Windows (Farrugia, 2012); software used to prepare material for publication: PARST (Nardelli, 1995).

Supplementary Material

Crystal structure: contains datablock(s) I, global. DOI: 10.1107/S1600536813009112/yk2089sup1.cif

e-69-0o731-sup1.cif (18.7KB, cif)

Structure factors: contains datablock(s) I. DOI: 10.1107/S1600536813009112/yk2089Isup2.hkl

e-69-0o731-Isup2.hkl (113.3KB, hkl)

Supplementary material file. DOI: 10.1107/S1600536813009112/yk2089Isup3.cml

Additional supplementary materials: crystallographic information; 3D view; checkCIF report

Table 1. Hydrogen-bond geometry (Å, °).

D—H⋯A D—H H⋯A DA D—H⋯A
C5—H5⋯O4i 0.95 2.42 3.337 (3) 161

Symmetry code: (i) Inline graphic.

Acknowledgments

The authors acknowledge the CRIST (Centro di Cristallografia Strutturale, University of Firenze), where the data collection was performed.

supplementary crystallographic information

Comment

As a result of the trigonal pyramidal stereochemistry which characterizes the sulfur atom in organic sulfinic acid esters and sulfoxides bearing two different substituents, these species are chiral. Chiral sulfoxides are key intermediates for asymmetric synthesis and can be obtained from the reaction of an organometallic reagent (e.g. a Grignard reagent) with a diastereomerically pure sulfinate ester of menthol (Drabowicz et al., 1982). On the other hand, menthyl sulfinates can be prepared by reaction of menthol (Oertling et al., 2007) either with sodium sulfinates (Solladié et al., 1987) or with a sulfonyl chloride in the presence of trimethylphosphite as in situ reducing agent (Klunder & Sharpless, 1987). We used the latter method to prepare the chiral sulfinic acid ester, (1R,2S,5R)-(-)-menthyl (S)-2-carbomethoxybenzenesulfinate, here reported. The overall molecular shape of the title compound depends on the dihedral angle formed between the mean plane defined by the ring atoms of the menthyl and of the phenyl groupings (132.13°(8)). Bond distances and angles about the sulfur atom, as well as the orientation of the isopropyl chain with respect to the menthyl ring are in keeping with those already reported for this molecular fragment (Heinemann et al., 2007; Mariz et al., 2010; Cherkaoui & Nicoud, 1995). In the crystal, molecules are connected via weak Car—H···O contacts involving the double bonded oxygen atom of the sulfinate group as acceptor. The resulting molecular chain propagates along the b axis direction around the screw axis.

Experimental

For the synthesis of the title compound, see: Klunder & Sharpless (1987). Crystals of the title compound suitable for single-crystal X-ray diffraction analysis were obtained by slow evaporation from a diethyl ether solution of the sulfinate ester.

Refinement

All the H atoms were positioned with idealized geometry using a riding model and refined with Uiso(H) 1.2 times Ueq(C) (1.5 for methyl H atoms).

Figures

Fig. 1.

Fig. 1.

Crystal structure of the title compound with labelling and displacement ellipsoids drawn at the 50% probability level.

Fig. 2.

Fig. 2.

Crystal structure of the title compound with view along the c-axis. Intermolecular interactions are shown as dashed lines.

Crystal data

C18H26O4S F(000) = 364
Mr = 338.45 Dx = 1.233 Mg m3
Monoclinic, P21 Cu Kα radiation, λ = 1.5418 Å
a = 9.7918 (2) Å Cell parameters from 3618 reflections
b = 9.3938 (2) Å θ = 4.5–64.6°
c = 10.6998 (2) Å µ = 1.72 mm1
β = 112.176 (2)° T = 150 K
V = 911.39 (3) Å3 Platelet, colourless
Z = 2 0.26 × 0.22 × 0.08 mm

Data collection

Oxford Diffraction Xcalibur PX diffractometer 2354 independent reflections
Radiation source: Enhance (Cu) X-ray Source 2115 reflections with I > 2σ(I)
Graphite monochromator Rint = 0.021
Detector resolution: 8.1241 pixels mm-1 θmax = 64.8°, θmin = 4.5°
ω scans h = −11→10
Absorption correction: multi-scan (CrysAlis RED; Oxford Diffraction, 2006) k = −10→8
Tmin = 0.660, Tmax = 0.872 l = −11→12
4681 measured reflections

Refinement

Refinement on F2 Secondary atom site location: difference Fourier map
Least-squares matrix: full Hydrogen site location: inferred from neighbouring sites
R[F2 > 2σ(F2)] = 0.031 H-atom parameters constrained
wR(F2) = 0.078 w = 1/[σ2(Fo2) + (0.0533P)2] where P = (Fo2 + 2Fc2)/3
S = 1.07 (Δ/σ)max < 0.001
2354 reflections Δρmax = 0.15 e Å3
209 parameters Δρmin = −0.22 e Å3
1 restraint Absolute structure: Flack (1983), 767 Friedel pairs
Primary atom site location: structure-invariant direct methods Flack parameter: 0.038 (18)

Special details

Geometry. All s.u.'s (except the s.u. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell s.u.'s are taken into account individually in the estimation of s.u.'s in distances, angles and torsion angles; correlations between s.u.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell s.u.'s is used for estimating s.u.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > 2σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.

Fractional atomic coordinates and isotropic or equivalent isotropic displacement parameters (Å2)

x y z Uiso*/Ueq
S1 0.13357 (6) 0.36878 (7) 0.29567 (5) 0.02816 (16)
O1 −0.12928 (17) 0.2413 (2) 0.29271 (17) 0.0370 (5)
O2 −0.14622 (19) 0.0826 (2) 0.44178 (18) 0.0456 (5)
O3 0.10664 (16) 0.26365 (17) 0.16750 (14) 0.0276 (4)
O4 0.27015 (18) 0.4479 (2) 0.31899 (17) 0.0393 (5)
C1 0.1889 (2) 0.2232 (3) 0.4157 (2) 0.0276 (6)
C2 0.0910 (3) 0.1423 (3) 0.4543 (2) 0.0278 (5)
C3 0.1479 (3) 0.0401 (3) 0.5550 (2) 0.0351 (6)
H3 0.0830 −0.0130 0.5844 0.042*
C4 0.2987 (3) 0.0150 (3) 0.6128 (2) 0.0401 (7)
H4 0.3364 −0.0556 0.6808 0.048*
C5 0.3939 (3) 0.0927 (3) 0.5715 (2) 0.0417 (7)
H5 0.4969 0.0741 0.6096 0.050*
C6 0.3395 (3) 0.1976 (3) 0.4747 (2) 0.0350 (6)
H6 0.4056 0.2526 0.4484 0.042*
C7 −0.0714 (2) 0.1625 (3) 0.3865 (2) 0.0288 (5)
C8 −0.3054 (3) 0.0939 (4) 0.3802 (3) 0.0586 (9)
H8A −0.3501 0.0279 0.4248 0.088*
H8B −0.3386 0.0700 0.2842 0.088*
H8C −0.3353 0.1915 0.3901 0.088*
C9 0.0431 (2) 0.3366 (2) 0.03670 (19) 0.0252 (5)
H9 0.0707 0.4396 0.0496 0.030*
C10 0.1105 (3) 0.2704 (3) −0.0566 (2) 0.0322 (6)
H10 0.0819 0.1676 −0.0660 0.039*
C11 0.0369 (3) 0.3372 (3) −0.1967 (2) 0.0404 (7)
H11A 0.0642 0.4391 −0.1920 0.048*
H11B 0.0742 0.2898 −0.2602 0.048*
C12 −0.1312 (3) 0.3239 (3) −0.2505 (2) 0.0439 (7)
H12A −0.1740 0.3709 −0.3397 0.053*
H12B −0.1588 0.2220 −0.2628 0.053*
C13 −0.1943 (3) 0.3903 (3) −0.1564 (2) 0.0377 (7)
H13 −0.1691 0.4939 −0.1486 0.045*
C14 −0.1233 (2) 0.3239 (3) −0.0165 (2) 0.0333 (6)
H14A −0.1609 0.3721 0.0464 0.040*
H14B −0.1511 0.2222 −0.0210 0.040*
C15 −0.3628 (3) 0.3767 (5) −0.2088 (3) 0.0574 (8)
H15A −0.3992 0.4212 −0.1445 0.086*
H15B −0.3903 0.2757 −0.2188 0.086*
H15C −0.4067 0.4242 −0.2964 0.086*
C16 0.2812 (3) 0.2752 (3) 0.0022 (3) 0.0397 (7)
H16 0.3151 0.2284 0.0928 0.048*
C17 0.3439 (3) 0.4256 (3) 0.0237 (3) 0.0487 (8)
H17A 0.3020 0.4796 0.0791 0.073*
H17B 0.3188 0.4728 −0.0639 0.073*
H17C 0.4514 0.4214 0.0697 0.073*
C18 0.3433 (4) 0.1894 (4) −0.0842 (3) 0.0599 (9)
H18A 0.3017 0.0932 −0.0970 0.090*
H18B 0.4509 0.1839 −0.0393 0.090*
H18C 0.3176 0.2358 −0.1722 0.090*

Atomic displacement parameters (Å2)

U11 U22 U33 U12 U13 U23
S1 0.0300 (3) 0.0257 (3) 0.0306 (3) −0.0036 (3) 0.0135 (2) −0.0045 (3)
O1 0.0298 (9) 0.0443 (12) 0.0374 (9) 0.0010 (8) 0.0133 (8) 0.0100 (9)
O2 0.0312 (9) 0.0591 (14) 0.0451 (10) −0.0078 (9) 0.0127 (9) 0.0180 (10)
O3 0.0333 (8) 0.0240 (9) 0.0245 (8) 0.0019 (7) 0.0099 (7) −0.0007 (7)
O4 0.0361 (9) 0.0407 (11) 0.0410 (9) −0.0146 (9) 0.0144 (8) −0.0045 (9)
C1 0.0289 (12) 0.0302 (15) 0.0209 (11) −0.0024 (11) 0.0065 (10) −0.0045 (10)
C2 0.0302 (12) 0.0306 (15) 0.0225 (11) 0.0002 (11) 0.0097 (9) −0.0035 (10)
C3 0.0395 (14) 0.0363 (16) 0.0276 (12) −0.0029 (12) 0.0104 (12) −0.0004 (12)
C4 0.0456 (16) 0.0387 (18) 0.0291 (13) 0.0101 (13) 0.0062 (13) 0.0005 (12)
C5 0.0318 (14) 0.0530 (19) 0.0331 (13) 0.0105 (13) 0.0040 (12) −0.0082 (14)
C6 0.0303 (13) 0.0414 (17) 0.0332 (13) 0.0015 (12) 0.0119 (11) −0.0065 (12)
C7 0.0310 (13) 0.0292 (15) 0.0279 (12) −0.0023 (11) 0.0131 (11) −0.0033 (12)
C8 0.0299 (14) 0.083 (3) 0.0579 (18) −0.0111 (16) 0.0109 (14) 0.0230 (18)
C9 0.0300 (11) 0.0190 (15) 0.0264 (11) −0.0018 (10) 0.0102 (9) 0.0021 (10)
C10 0.0383 (13) 0.0275 (15) 0.0333 (12) −0.0012 (12) 0.0163 (11) 0.0009 (11)
C11 0.0554 (16) 0.038 (2) 0.0332 (12) −0.0040 (13) 0.0226 (12) 0.0031 (12)
C12 0.0538 (16) 0.0390 (18) 0.0301 (12) −0.0056 (13) 0.0058 (11) 0.0043 (12)
C13 0.0370 (13) 0.0301 (18) 0.0368 (12) −0.0022 (12) 0.0034 (11) 0.0035 (13)
C14 0.0284 (12) 0.0338 (17) 0.0352 (12) −0.0003 (11) 0.0092 (10) 0.0000 (11)
C15 0.0369 (13) 0.068 (2) 0.0492 (15) −0.0022 (17) −0.0037 (12) 0.0096 (18)
C16 0.0421 (15) 0.0395 (18) 0.0469 (15) 0.0020 (13) 0.0275 (12) 0.0043 (14)
C17 0.0396 (15) 0.053 (2) 0.0575 (18) −0.0113 (14) 0.0229 (14) −0.0056 (15)
C18 0.065 (2) 0.056 (2) 0.076 (2) 0.0083 (18) 0.0462 (17) −0.0065 (19)

Geometric parameters (Å, º)

S1—O4 1.4669 (17) C10—C16 1.548 (3)
S1—O3 1.6287 (16) C10—H10 1.0000
S1—C1 1.813 (2) C11—C12 1.530 (3)
O1—C7 1.203 (3) C11—H11A 0.9900
O2—C7 1.333 (3) C11—H11B 0.9900
O2—C8 1.449 (3) C12—C13 1.501 (4)
O3—C9 1.469 (2) C12—H12A 0.9900
C1—C6 1.388 (3) C12—H12B 0.9900
C1—C2 1.403 (3) C13—C14 1.525 (3)
C2—C3 1.392 (4) C13—C15 1.535 (3)
C2—C7 1.490 (3) C13—H13 1.0000
C3—C4 1.389 (4) C14—H14A 0.9900
C3—H3 0.9500 C14—H14B 0.9900
C4—C5 1.382 (4) C15—H15A 0.9800
C4—H4 0.9500 C15—H15B 0.9800
C5—C6 1.382 (4) C15—H15C 0.9800
C5—H5 0.9500 C16—C18 1.517 (4)
C6—H6 0.9500 C16—C17 1.524 (4)
C8—H8A 0.9800 C16—H16 1.0000
C8—H8B 0.9800 C17—H17A 0.9800
C8—H8C 0.9800 C17—H17B 0.9800
C9—C14 1.514 (3) C17—H17C 0.9800
C9—C10 1.522 (3) C18—H18A 0.9800
C9—H9 1.0000 C18—H18B 0.9800
C10—C11 1.532 (3) C18—H18C 0.9800
O4—S1—O3 107.34 (9) C10—C11—H11A 109.2
O4—S1—C1 104.61 (10) C12—C11—H11B 109.2
O3—S1—C1 92.81 (9) C10—C11—H11B 109.2
C7—O2—C8 115.7 (2) H11A—C11—H11B 107.9
C9—O3—S1 113.26 (13) C13—C12—C11 111.8 (2)
C6—C1—C2 119.9 (2) C13—C12—H12A 109.3
C6—C1—S1 115.80 (19) C11—C12—H12A 109.3
C2—C1—S1 124.25 (17) C13—C12—H12B 109.3
C3—C2—C1 118.9 (2) C11—C12—H12B 109.3
C3—C2—C7 120.4 (2) H12A—C12—H12B 107.9
C1—C2—C7 120.7 (2) C12—C13—C14 109.7 (2)
C4—C3—C2 120.6 (2) C12—C13—C15 112.2 (2)
C4—C3—H3 119.7 C14—C13—C15 110.7 (2)
C2—C3—H3 119.7 C12—C13—H13 108.0
C5—C4—C3 120.0 (3) C14—C13—H13 108.0
C5—C4—H4 120.0 C15—C13—H13 108.0
C3—C4—H4 120.0 C9—C14—C13 111.34 (19)
C4—C5—C6 120.0 (2) C9—C14—H14A 109.4
C4—C5—H5 120.0 C13—C14—H14A 109.4
C6—C5—H5 120.0 C9—C14—H14B 109.4
C5—C6—C1 120.5 (2) C13—C14—H14B 109.4
C5—C6—H6 119.8 H14A—C14—H14B 108.0
C1—C6—H6 119.8 C13—C15—H15A 109.5
O1—C7—O2 123.5 (2) C13—C15—H15B 109.5
O1—C7—C2 124.4 (2) H15A—C15—H15B 109.5
O2—C7—C2 112.1 (2) C13—C15—H15C 109.5
O2—C8—H8A 109.5 H15A—C15—H15C 109.5
O2—C8—H8B 109.5 H15B—C15—H15C 109.5
H8A—C8—H8B 109.5 C18—C16—C17 110.6 (2)
O2—C8—H8C 109.5 C18—C16—C10 110.9 (2)
H8A—C8—H8C 109.5 C17—C16—C10 113.6 (2)
H8B—C8—H8C 109.5 C18—C16—H16 107.1
O3—C9—C14 109.29 (17) C17—C16—H16 107.1
O3—C9—C10 107.54 (18) C10—C16—H16 107.1
C14—C9—C10 113.12 (18) C16—C17—H17A 109.5
O3—C9—H9 108.9 C16—C17—H17B 109.5
C14—C9—H9 108.9 H17A—C17—H17B 109.5
C10—C9—H9 108.9 C16—C17—H17C 109.5
C9—C10—C11 108.34 (19) H17A—C17—H17C 109.5
C9—C10—C16 112.98 (19) H17B—C17—H17C 109.5
C11—C10—C16 115.0 (2) C16—C18—H18A 109.5
C9—C10—H10 106.7 C16—C18—H18B 109.5
C11—C10—H10 106.7 H18A—C18—H18B 109.5
C16—C10—H10 106.7 C16—C18—H18C 109.5
C12—C11—C10 112.09 (19) H18A—C18—H18C 109.5
C12—C11—H11A 109.2 H18B—C18—H18C 109.5

Hydrogen-bond geometry (Å, º)

D—H···A D—H H···A D···A D—H···A
C5—H5···O4i 0.95 2.42 3.337 (3) 161

Symmetry code: (i) −x+1, y−1/2, −z+1.

Footnotes

Supplementary data and figures for this paper are available from the IUCr electronic archives (Reference: YK2089).

References

  1. Altomare, A., Burla, M. C., Camalli, M., Cascarano, G. L., Giacovazzo, C., Guagliardi, A., Moliterni, A. G. G., Polidori, G. & Spagna, R. (1999). J. Appl. Cryst. 32, 115–119.
  2. Cherkaoui, M. Z. & Nicoud, J.-F. (1995). New J. Chem. 19, 851–861.
  3. Drabowicz, J., Bujnicki, B. & Mikolajczyk, M. (1982). J. Org. Chem. 47, 3325–3327.
  4. Farrugia, L. J. (2012). J. Appl. Cryst. 45, 849–854.
  5. Flack, H. D. (1983). Acta Cryst. A39, 876–881.
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  7. Klunder, J. M. & Sharpless, K. B. (1987). J. Org. Chem. 52, 2598–2602.
  8. Mariz, R., Poater, A., Gatti, M., Drinkel, E., Bürgi, J. J., Luan, X., Blumentritt, S., Linden, A., Cavallo, L. & Dorta, R. (2010). Chem. Eur. J. 16, 14335–14347. [DOI] [PubMed]
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  13. Solladié, G., Hutt, J. & Girardin, A. (1987). Synthesis, pp. 173–173.

Associated Data

This section collects any data citations, data availability statements, or supplementary materials included in this article.

Supplementary Materials

Crystal structure: contains datablock(s) I, global. DOI: 10.1107/S1600536813009112/yk2089sup1.cif

e-69-0o731-sup1.cif (18.7KB, cif)

Structure factors: contains datablock(s) I. DOI: 10.1107/S1600536813009112/yk2089Isup2.hkl

e-69-0o731-Isup2.hkl (113.3KB, hkl)

Supplementary material file. DOI: 10.1107/S1600536813009112/yk2089Isup3.cml

Additional supplementary materials: crystallographic information; 3D view; checkCIF report


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