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Acta Crystallographica Section E: Structure Reports Online logoLink to Acta Crystallographica Section E: Structure Reports Online
. 2013 Apr 17;69(Pt 5):o740. doi: 10.1107/S1600536813009902

Ethyl 7-methyl-2-phenyl­pyrazolo­[1,5-a]pyrimidine-5-carboxyl­ate

Ibtissam Bassoude a,b,*, Sabine Berteina-Raboin b, El Mokhtar Essassi a,c, Gérald Guillaumet b, Lahcen El Ammari d
PMCID: PMC3648271  PMID: 23723891

Abstract

The fused pyrazole and pyrimidine rings in the title compound, C16H15N3O2, are almost coplanar, being inclined to one another by 1.31 (12)°. The mean plane of this fused ring system is nearly coplanar with the phenyl ring, as indicated by the dihedral angle between their planes of 1.31 (12)°. The fused-ring system and the phenyl ring are nearly coplanar, as indicated by the dihedral angle of 1.27 (10)°. In the crystal, mol­ecules form inversion dimers via pairs of C—H⋯O hydrogen bonds. C—H⋯N inter­actions connect the dimers into a three-dimensional network. In addition, π–π contacts are observed, with centroid–centroid distances of 3.426 (2) Å.

Related literature  

For pharmacological and biochemical properties of pyrazolo­[1,5-a]pyrimidine derivatives, see: Selleri et al. (2005); Almansa et al. (2001); Suzuki et al. (2001); Chen et al. (2004). For related structures, see: Chimichi et al. (1992).graphic file with name e-69-0o740-scheme1.jpg

Experimental  

Crystal data  

  • C16H15N3O2

  • M r = 281.31

  • Orthorhombic, Inline graphic

  • a = 8.0542 (8) Å

  • b = 16.4104 (19) Å

  • c = 21.635 (2) Å

  • V = 2859.5 (5) Å3

  • Z = 8

  • Mo Kα radiation

  • μ = 0.09 mm−1

  • T = 296 K

  • 0.41 × 0.32 × 0.21 mm

Data collection  

  • Bruker X8 APEXII area-detector diffractometer

  • 12894 measured reflections

  • 2783 independent reflections

  • 1919 reflections with I > 2σ(I)

  • R int = 0.033

Refinement  

  • R[F 2 > 2σ(F 2)] = 0.052

  • wR(F 2) = 0.170

  • S = 1.04

  • 2783 reflections

  • 190 parameters

  • H-atom parameters constrained

  • Δρmax = 0.35 e Å−3

  • Δρmin = −0.36 e Å−3

Data collection: APEX2 (Bruker, 2009); cell refinement: SAINT (Bruker, 2009); data reduction: SAINT; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008); molecular graphics: ORTEP-3 for Windows (Farrugia, 2012); software used to prepare material for publication: PLATON (Spek, 2009) and publCIF (Westrip, 2010).

Supplementary Material

Crystal structure: contains datablock(s) I, global. DOI: 10.1107/S1600536813009902/rz5057sup1.cif

e-69-0o740-sup1.cif (24.1KB, cif)

Structure factors: contains datablock(s) I. DOI: 10.1107/S1600536813009902/rz5057Isup2.hkl

e-69-0o740-Isup2.hkl (136.7KB, hkl)

Supplementary material file. DOI: 10.1107/S1600536813009902/rz5057Isup3.cml

Additional supplementary materials: crystallographic information; 3D view; checkCIF report

Table 1. Hydrogen-bond geometry (Å, °).

D—H⋯A D—H H⋯A DA D—H⋯A
C12—H12⋯O1i 0.93 2.36 3.258 (3) 161
C6—H6⋯N3ii 0.93 2.62 3.507 (3) 161

Symmetry codes: (i) Inline graphic; (ii) Inline graphic.

Acknowledgments

The authors thank the Unit of Support for Technical and Scientific Research (UATRS, CNRST) for the X-ray measurements.

supplementary crystallographic information

Comment

Pyrazolo[1,5-a]pyrimidines have attracted considerable interest because of their biological activity. For instance, they are known for their potent utility as selective peripheral benzodiazepine receptor ligands (Selleri et al., 2005), COX-2 selective inhibitors (Almansa et al., 2001), HMG-CoA reductase inhibitors (Suzuki et al., 2001) and CRF1 antagonists (Chen et al., 2004).

The condensation of 5-amino-3-arylpyrazoles with ethyl 2,4-dioxopentanoate leads to the title compound ethyl-7-methyl-2-phenylpyrazolo[1,5-a]pyrimidine- 5-carboxylate and its isomeric ethyl 5-methyl-2-phenylpyrazolo[1,5-a]pyrimidine-7-carboxylate (Chimichi et al., 1992).

The crystal structure of the title compound is built up from two fused five and six-membered rings (N1/N2/C2–C4 and N2/N3/C1/C2/C11/C12) linked to a methyl, a phenyl (C5–C10) and to an ethylcarboxylate group (C14/O1/O2/C15/C16) as shown in Fig. 1. The pyrazole and pyrimidine rings are almost planar with a maximum deviation for atom C6 of 0.002 (2) Å and 0.004 (2) Å, respectively. The mean plane through the two fused rings is slightly folded around the common edge as indicated by the dihedral angle between them of 1.31 (12)°. The dihedral angle between the phenyl ring and the fused-ring system is 1.27 (10)°.

In the crystal structure C12–H12···O1 hydrogen bonds form inversion dimers. Intermolecular C6—H6···N3 interactions connect the dimers into a three dimensional network. In addition, the molecules are connected by π–π contacts, with centroid–centroid distances of 3.426 (2) Å.

Experimental

A solution of ethyl 2,4-dioxopentanoate (1.64 g, 10.4 mmol) and 5-amino-3-phenylpyrazole (1.5 g, 9.4 mmol) in 10 ml of EtOH was heated to reflux for 30 min. After evaporation of solvent under reduced pressure, the residue was purified on silica gel by column chromatography using a 8:2 (v/v) mixture of petroleum ether and ethyl acetate as eluent. Ethyl-7-methyl-2-phenylpyrazolo[1,5-a]pyrimidine-5-carboxylate was recrystallized from cyclohexane to give colourless crystals.

Refinement

All H atoms could be located in a difference Fourier map and treated as riding with C—H = 0.93 Å (aromatic), C—H = 0.97 Å (methylene) and C—H = 0.96 Å (methyl), and with Uiso(H) = 1.2 Ueq(aromatic, methylene) or Uiso(H) = 1.5 Ueq (methyl).

Figures

Fig. 1.

Fig. 1.

The molecular structure of the title compound with displacement ellipsoids drawn at the 50% probability level. H atoms are represented as small circles.

Fig. 2.

Fig. 2.

Crystal packing of the title compound showing C12–H12···O1 and C6–H6···N3 hydrogen bonds as blue dashed lines, with C—H···π interactions and a π—π contact (red lines). The red spheres represent the centroids of the C5–C10 and N2/N3/C1/C2/C11/C12 rings and their symmetry partners.

Crystal data

C16H15N3O2 F(000) = 1184
Mr = 281.31 Dx = 1.307 Mg m3
Orthorhombic, Pbca Mo Kα radiation, λ = 0.71073 Å
Hall symbol: -p 2ac 2ab Cell parameters from 2783 reflections
a = 8.0542 (8) Å θ = 2.5–26.0°
b = 16.4104 (19) Å µ = 0.09 mm1
c = 21.635 (2) Å T = 296 K
V = 2859.5 (5) Å3 Block, colourless
Z = 8 0.41 × 0.32 × 0.21 mm

Data collection

Bruker X8 APEXII area-detector diffractometer 1919 reflections with I > 2σ(I)
Radiation source: fine-focus sealed tube Rint = 0.033
Graphite monochromator θmax = 26.0°, θmin = 2.5°
φ and ω scans h = −9→9
12894 measured reflections k = −20→19
2783 independent reflections l = −25→26

Refinement

Refinement on F2 Primary atom site location: structure-invariant direct methods
Least-squares matrix: full Secondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.052 Hydrogen site location: difference Fourier map
wR(F2) = 0.170 H-atom parameters constrained
S = 1.04 w = 1/[σ2(Fo2) + (0.0849P)2 + 1.249P] where P = (Fo2 + 2Fc2)/3
2783 reflections (Δ/σ)max < 0.001
190 parameters Δρmax = 0.35 e Å3
0 restraints Δρmin = −0.36 e Å3

Special details

Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
Refinement. Refinement of F2 against all reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on all data will be even larger.

Fractional atomic coordinates and isotropic or equivalent isotropic displacement parameters (Å2)

x y z Uiso*/Ueq
C1 0.7015 (3) 0.59846 (13) −0.00919 (11) 0.0423 (5)
C2 0.4533 (2) 0.62909 (13) 0.03355 (10) 0.0392 (5)
C3 0.2988 (3) 0.66217 (13) 0.04562 (11) 0.0431 (5)
H3 0.2464 0.7041 0.0243 0.052*
C4 0.2383 (3) 0.61938 (13) 0.09644 (10) 0.0404 (5)
C5 0.0780 (3) 0.63145 (14) 0.12822 (10) 0.0426 (5)
C6 −0.0290 (3) 0.69261 (15) 0.10875 (12) 0.0531 (6)
H6 0.0002 0.7255 0.0755 0.064*
C7 −0.1796 (3) 0.70489 (17) 0.13873 (14) 0.0660 (8)
H7 −0.2511 0.7456 0.1252 0.079*
C8 −0.2234 (4) 0.65694 (18) 0.18851 (14) 0.0689 (8)
H8 −0.3243 0.6650 0.2085 0.083*
C9 −0.1158 (3) 0.5968 (2) 0.20843 (13) 0.0681 (8)
H9 −0.1438 0.5649 0.2424 0.082*
C10 0.0323 (3) 0.58363 (17) 0.17833 (12) 0.0557 (7)
H10 0.1025 0.5422 0.1917 0.067*
C11 0.6159 (3) 0.52087 (13) 0.07911 (10) 0.0423 (5)
C12 0.7310 (3) 0.53683 (14) 0.03464 (11) 0.0455 (6)
H12 0.8291 0.5070 0.0332 0.055*
C13 0.6281 (3) 0.45638 (16) 0.12736 (12) 0.0584 (7)
H13A 0.5308 0.4578 0.1530 0.088*
H13B 0.7247 0.4658 0.1523 0.088*
H13C 0.6365 0.4040 0.1079 0.088*
C14 0.8285 (3) 0.61382 (15) −0.05871 (12) 0.0493 (6)
C15 0.8726 (4) 0.6665 (2) −0.15930 (14) 0.0784 (9)
H15A 0.9632 0.6276 −0.1601 0.094*
H15B 0.9191 0.7208 −0.1558 0.094*
C16 0.7733 (6) 0.6597 (3) −0.21607 (16) 0.1145 (15)
H16A 0.8427 0.6700 −0.2513 0.172*
H16B 0.6848 0.6989 −0.2150 0.172*
H16C 0.7276 0.6058 −0.2190 0.172*
N1 0.3450 (2) 0.56159 (11) 0.11673 (9) 0.0435 (5)
N2 0.4760 (2) 0.56790 (11) 0.07779 (8) 0.0395 (5)
N3 0.5670 (2) 0.64421 (11) −0.01033 (9) 0.0424 (5)
O1 0.9709 (2) 0.59496 (15) −0.05385 (11) 0.0868 (7)
O2 0.76394 (19) 0.65002 (11) −0.10746 (8) 0.0575 (5)

Atomic displacement parameters (Å2)

U11 U22 U33 U12 U13 U23
C1 0.0374 (11) 0.0394 (12) 0.0500 (14) −0.0004 (9) −0.0033 (9) −0.0011 (11)
C2 0.0402 (11) 0.0342 (11) 0.0432 (13) −0.0002 (9) −0.0029 (9) 0.0031 (10)
C3 0.0424 (11) 0.0386 (12) 0.0484 (14) 0.0045 (9) 0.0018 (10) 0.0049 (10)
C4 0.0398 (11) 0.0401 (11) 0.0411 (13) −0.0031 (9) −0.0021 (9) −0.0020 (10)
C5 0.0410 (11) 0.0439 (12) 0.0429 (13) −0.0096 (9) 0.0017 (9) −0.0050 (11)
C6 0.0491 (13) 0.0494 (14) 0.0607 (16) −0.0019 (11) 0.0115 (11) 0.0015 (12)
C7 0.0535 (14) 0.0578 (16) 0.087 (2) 0.0039 (12) 0.0200 (14) −0.0032 (16)
C8 0.0566 (16) 0.074 (2) 0.076 (2) −0.0108 (14) 0.0254 (14) −0.0131 (17)
C9 0.0625 (16) 0.083 (2) 0.0586 (18) −0.0192 (15) 0.0127 (13) 0.0060 (15)
C10 0.0517 (13) 0.0662 (16) 0.0492 (15) −0.0084 (12) −0.0017 (11) 0.0072 (13)
C11 0.0392 (11) 0.0382 (12) 0.0496 (14) −0.0004 (9) −0.0137 (9) 0.0017 (11)
C12 0.0359 (10) 0.0436 (13) 0.0570 (15) 0.0039 (9) −0.0077 (10) −0.0002 (12)
C13 0.0522 (14) 0.0578 (15) 0.0650 (17) 0.0032 (12) −0.0134 (12) 0.0171 (13)
C14 0.0387 (12) 0.0475 (13) 0.0618 (16) 0.0016 (10) 0.0021 (10) −0.0024 (12)
C15 0.0669 (17) 0.101 (2) 0.068 (2) −0.0081 (17) 0.0267 (15) 0.0040 (18)
C16 0.124 (3) 0.146 (4) 0.073 (3) 0.013 (3) 0.020 (2) 0.028 (3)
N1 0.0415 (9) 0.0463 (11) 0.0428 (11) −0.0036 (8) −0.0023 (8) 0.0023 (9)
N2 0.0384 (9) 0.0375 (10) 0.0425 (11) −0.0020 (7) −0.0056 (8) 0.0024 (8)
N3 0.0388 (9) 0.0402 (10) 0.0482 (11) 0.0021 (8) 0.0031 (8) 0.0030 (9)
O1 0.0407 (10) 0.1158 (18) 0.1039 (17) 0.0204 (10) 0.0123 (10) 0.0295 (14)
O2 0.0442 (9) 0.0723 (12) 0.0561 (11) 0.0020 (8) 0.0098 (8) 0.0099 (10)

Geometric parameters (Å, º)

C1—N3 1.318 (3) C9—H9 0.9300
C1—C12 1.407 (3) C10—H10 0.9300
C1—C14 1.503 (3) C11—C12 1.361 (3)
C2—N3 1.342 (3) C11—N2 1.366 (3)
C2—C3 1.383 (3) C11—C13 1.490 (3)
C2—N2 1.399 (3) C12—H12 0.9300
C3—C4 1.393 (3) C13—H13A 0.9600
C3—H3 0.9300 C13—H13B 0.9600
C4—N1 1.353 (3) C13—H13C 0.9600
C4—C5 1.476 (3) C14—O1 1.192 (3)
C5—C10 1.388 (3) C14—O2 1.318 (3)
C5—C6 1.389 (3) C15—O2 1.448 (3)
C6—C7 1.390 (3) C15—C16 1.470 (5)
C6—H6 0.9300 C15—H15A 0.9700
C7—C8 1.380 (4) C15—H15B 0.9700
C7—H7 0.9300 C16—H16A 0.9600
C8—C9 1.382 (4) C16—H16B 0.9600
C8—H8 0.9300 C16—H16C 0.9600
C9—C10 1.376 (4) N1—N2 1.354 (2)
N3—C1—C12 124.1 (2) N2—C11—C13 118.0 (2)
N3—C1—C14 116.8 (2) C11—C12—C1 120.0 (2)
C12—C1—C14 119.09 (19) C11—C12—H12 120.0
N3—C2—C3 132.5 (2) C1—C12—H12 120.0
N3—C2—N2 121.83 (18) C11—C13—H13A 109.5
C3—C2—N2 105.69 (18) C11—C13—H13B 109.5
C2—C3—C4 105.43 (19) H13A—C13—H13B 109.5
C2—C3—H3 127.3 C11—C13—H13C 109.5
C4—C3—H3 127.3 H13A—C13—H13C 109.5
N1—C4—C3 112.77 (19) H13B—C13—H13C 109.5
N1—C4—C5 119.9 (2) O1—C14—O2 124.6 (2)
C3—C4—C5 127.3 (2) O1—C14—C1 123.3 (2)
C10—C5—C6 118.7 (2) O2—C14—C1 112.16 (18)
C10—C5—C4 121.3 (2) O2—C15—C16 107.7 (3)
C6—C5—C4 119.9 (2) O2—C15—H15A 110.2
C5—C6—C7 120.3 (2) C16—C15—H15A 110.2
C5—C6—H6 119.8 O2—C15—H15B 110.2
C7—C6—H6 119.8 C16—C15—H15B 110.2
C8—C7—C6 120.3 (3) H15A—C15—H15B 108.5
C8—C7—H7 119.8 C15—C16—H16A 109.5
C6—C7—H7 119.8 C15—C16—H16B 109.5
C7—C8—C9 119.4 (2) H16A—C16—H16B 109.5
C7—C8—H8 120.3 C15—C16—H16C 109.5
C9—C8—H8 120.3 H16A—C16—H16C 109.5
C10—C9—C8 120.5 (3) H16B—C16—H16C 109.5
C10—C9—H9 119.7 C4—N1—N2 103.87 (17)
C8—C9—H9 119.7 N1—N2—C11 125.91 (18)
C9—C10—C5 120.7 (3) N1—N2—C2 112.24 (16)
C9—C10—H10 119.6 C11—N2—C2 121.85 (18)
C5—C10—H10 119.6 C1—N3—C2 116.24 (19)
C12—C11—N2 115.98 (19) C14—O2—C15 117.8 (2)
C12—C11—C13 126.0 (2)
N3—C2—C3—C4 178.2 (2) N3—C1—C14—O2 −22.0 (3)
N2—C2—C3—C4 0.3 (2) C12—C1—C14—O2 157.4 (2)
C2—C3—C4—N1 −0.2 (3) C3—C4—N1—N2 −0.1 (2)
C2—C3—C4—C5 179.4 (2) C5—C4—N1—N2 −179.70 (18)
N1—C4—C5—C10 −1.1 (3) C4—N1—N2—C11 −178.94 (19)
C3—C4—C5—C10 179.3 (2) C4—N1—N2—C2 0.3 (2)
N1—C4—C5—C6 177.8 (2) C12—C11—N2—N1 178.77 (19)
C3—C4—C5—C6 −1.8 (3) C13—C11—N2—N1 0.0 (3)
C10—C5—C6—C7 −0.6 (4) C12—C11—N2—C2 −0.4 (3)
C4—C5—C6—C7 −179.4 (2) C13—C11—N2—C2 −179.1 (2)
C5—C6—C7—C8 0.6 (4) N3—C2—N2—N1 −178.54 (18)
C6—C7—C8—C9 0.3 (4) C3—C2—N2—N1 −0.4 (2)
C7—C8—C9—C10 −1.2 (4) N3—C2—N2—C11 0.7 (3)
C8—C9—C10—C5 1.3 (4) C3—C2—N2—C11 178.88 (19)
C6—C5—C10—C9 −0.4 (4) C12—C1—N3—C2 −0.4 (3)
C4—C5—C10—C9 178.5 (2) C14—C1—N3—C2 179.02 (19)
N2—C11—C12—C1 −0.3 (3) C3—C2—N3—C1 −177.9 (2)
C13—C11—C12—C1 178.3 (2) N2—C2—N3—C1 −0.3 (3)
N3—C1—C12—C11 0.7 (3) O1—C14—O2—C15 1.4 (4)
C14—C1—C12—C11 −178.7 (2) C1—C14—O2—C15 −178.5 (2)
N3—C1—C14—O1 158.1 (3) C16—C15—O2—C14 147.1 (3)
C12—C1—C14—O1 −22.5 (4)

Hydrogen-bond geometry (Å, º)

D—H···A D—H H···A D···A D—H···A
C12—H12···O1i 0.93 2.36 3.258 (3) 161
C6—H6···N3ii 0.93 2.62 3.507 (3) 161

Symmetry codes: (i) −x+2, −y+1, −z; (ii) x−1/2, −y+3/2, −z.

Footnotes

Supplementary data and figures for this paper are available from the IUCr electronic archives (Reference: RZ5057).

References

  1. Almansa, C. A., Alberto, F., Cavalcanti, F. L., Gomez, L. A., Miralles, A., Merlos, M., Garcia-Rafanell, J. & Forn, J. (2001). J. Med. Chem. 44, 350–361. [DOI] [PubMed]
  2. Bruker (2009). APEX2 and SAINT Bruker AXS Inc., Madison, Wisconsin, USA.
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  6. Selleri, S., Gratteri, P., Costagli, C., Bonaccini, C., Costanzo, A., Melani, F., Guerrini, G., Ciciani, G., Costa, B., Spinetti, F., Martini, C. & Bruni, F. (2005). Bioorg. Med. Chem. 13, 4821–4834. [DOI] [PubMed]
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  10. Westrip, S. P. (2010). J. Appl. Cryst. 43, 920–925.

Associated Data

This section collects any data citations, data availability statements, or supplementary materials included in this article.

Supplementary Materials

Crystal structure: contains datablock(s) I, global. DOI: 10.1107/S1600536813009902/rz5057sup1.cif

e-69-0o740-sup1.cif (24.1KB, cif)

Structure factors: contains datablock(s) I. DOI: 10.1107/S1600536813009902/rz5057Isup2.hkl

e-69-0o740-Isup2.hkl (136.7KB, hkl)

Supplementary material file. DOI: 10.1107/S1600536813009902/rz5057Isup3.cml

Additional supplementary materials: crystallographic information; 3D view; checkCIF report


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