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Acta Crystallographica Section E: Structure Reports Online logoLink to Acta Crystallographica Section E: Structure Reports Online
. 2013 May 18;69(Pt 6):m332. doi: 10.1107/S1600536813013135

Tris(ethyl­enedi­amine)­cobalt(II) dichloride

Kristin Cooke a, Andrei V Olenev a, Kirill Kovnir a,*
PMCID: PMC3684892  PMID: 23794994

Abstract

The title compound, [CoII(C2H8N2)3]Cl2, was obtained unexpectedly as the product of an attempted solvothermal synthesis of cobalt selenide from the elements in the presence of NH4Cl in ethyl­enedi­amine solvent. The three chelate rings of the distorted octa­hedral [Co(C2H8N2)3]2+ complex cation adopt twisted conformations about their C—C bonds. The spread of cis-N—Co—N bond angles [80.17 (6)–98.10 (6)°] in the title compound is considerably greater than the equivalent data for [CoIII(C2H8N2)3]Cl3 [Takamizawa et al. (2008). Angew. Chem. Int. Ed. 47, 1689–1692]. In the crystal, the components are linked by numerous N—H⋯Cl hydrogen bonds, generating a three-dimensional network in which the cationic complexes are stacked in columns along [010] and separated by columns of chloride anions.

Related literature  

The corresponding CoIII–tris-ethyl­enedi­amine complex with chloride counter-anions has been reported by Takamizawa et al. (2008).graphic file with name e-69-0m332-scheme1.jpg

Experimental  

Crystal data  

  • [Co(C2H8N2)3]Cl2

  • M r = 310.14

  • Orthorhombic, Inline graphic

  • a = 8.1590 (8) Å

  • b = 17.047 (3) Å

  • c = 20.3974 (14) Å

  • V = 2837.0 (6) Å3

  • Z = 8

  • Cu Kα radiation

  • μ = 12.81 mm−1

  • T = 90 K

  • 0.31 × 0.17 × 0.15 mm

Data collection  

  • Bruker APEXII CCD diffractometer

  • Absorption correction: multi-scan (SADABS; Bruker, 2003) T min = 0.109, T max = 0.243

  • 17930 measured reflections

  • 2700 independent reflections

  • 2437 reflections with I > 2σ(I)

  • R int = 0.042

Refinement  

  • R[F 2 > 2σ(F 2)] = 0.024

  • wR(F 2) = 0.059

  • S = 1.06

  • 2700 reflections

  • 232 parameters

  • All H-atom parameters refined

  • Δρmax = 0.26 e Å−3

  • Δρmin = −0.37 e Å−3

Data collection: APEX2 (Bruker, 2003); cell refinement: SAINT (Bruker, 2003); data reduction: SAINT; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008); molecular graphics: Mercury (Macrae et al., 2008); software used to prepare material for publication: SHELXL97.

Supplementary Material

Crystal structure: contains datablock(s) I, global. DOI: 10.1107/S1600536813013135/hb7079sup1.cif

e-69-0m332-sup1.cif (17.7KB, cif)

Structure factors: contains datablock(s) I. DOI: 10.1107/S1600536813013135/hb7079Isup2.hkl

e-69-0m332-Isup2.hkl (132.7KB, hkl)

Additional supplementary materials: crystallographic information; 3D view; checkCIF report

Table 1. Selected bond lengths (Å).

Co—N1 2.1540 (15)
Co—N3 2.1558 (15)
Co—N2 2.1635 (15)
Co—N5 2.1748 (15)
Co—N4 2.1767 (15)
Co—N6 2.1791 (16)

Table 2. Hydrogen-bond geometry (Å, °).

D—H⋯A D—H H⋯A DA D—H⋯A
N1—H1B⋯Cl2 0.82 (2) 2.48 (3) 3.2839 (17) 167 (2)
N1—H1A⋯Cl2i 0.86 (2) 2.57 (2) 3.3056 (16) 145.4 (18)
N2—H2A⋯Cl1ii 0.83 (2) 2.92 (2) 3.5494 (16) 133.6 (17)
N2—H2A⋯Cl2iii 0.83 (2) 2.94 (2) 3.5887 (17) 135.8 (17)
N2—H2B⋯Cl1 0.88 (2) 2.65 (2) 3.4566 (17) 152.5 (18)
N5—H5B⋯Cl1ii 0.87 (2) 2.51 (2) 3.3770 (16) 173.1 (19)
N5—H5A⋯Cl1iv 0.82 (2) 2.70 (2) 3.4514 (18) 152.4 (19)
N6—H6B⋯Cl1 0.88 (3) 2.66 (3) 3.4552 (18) 150.3 (19)
N6—H6A⋯Cl1v 0.83 (2) 2.71 (2) 3.4653 (16) 152.9 (19)
N3—H3A⋯Cl1iv 0.88 (2) 2.59 (2) 3.4075 (17) 154.2 (17)
N3—H3B⋯Cl2i 0.82 (2) 2.49 (2) 3.2560 (16) 156 (2)
N4—H4A⋯Cl2 0.85 (2) 2.68 (2) 3.5003 (17) 161 (2)
N4—H4B⋯Cl2iii 0.87 (2) 2.55 (2) 3.2919 (16) 143.5 (19)

Symmetry codes: (i) Inline graphic; (ii) Inline graphic; (iii) Inline graphic; (iv) Inline graphic; (v) Inline graphic.

Acknowledgments

The authors thank the UC Davis ChemEnergy NSF REU Grant #CHE-1004925 for financial support.

supplementary crystallographic information

Comment

In the chiral Co(II)(en)3 cationic complex (Fig. 1) N atoms form distorted octahedron around central Co atom, cis angles deviate from 90° by less than 10°. Both Λ and Δ isomers are present in equal amounts in the centrosymmetric crystal structure.

Co(en)3 cationic complexes are stacked in columns along [010] direction (Figure 2) and separated by the columns of Cl anions. There two types of chlorine anions in the crystal structure. Cl1 has distorted octahedral coordination by 6 hydrogen atoms from 4 different Co(en)3 complexes. Cl2 has distorted trigonal bipyramid coordination by 5 hydrogen atoms from 2 different Co(en)3 complexes. H···Cl distances vary from 2.45 to 2.70 Å.

The corresponding Co(III) trisethylenediamine complex with chloride counter-anions has been reported. (Takamizawa et al., 2008). The Co(III)(en)3 cationic complex is more regular: cis angles deviate from 90° by less than 4°.

Experimental

The title compound, [Co(C2N2H8)3]Cl2, was obtained unintentionally as the product of an attempted synthesis of cobalt selenide. Co (64 mg), Se (86 mg), and NH4Cl (100 mg) were reacted in ethylenediamine (en) solvent (30 ml). Reaction was performed in closed hydrothermal vessel at 180°C for 48 h. Degree of the vessel filling was 70%. Irregular moisture-sensitive yellow crystals of the title compound were recovered.

Refinement

H atoms bonded to N and C atoms were located in a difference Fourier maps and refined without any restraints.

Figures

Fig. 1.

Fig. 1.

The molecular structure of (I) with 50% probability displacement ellipsoids for non-H atoms.

Fig. 2.

Fig. 2.

Packing of the molecules in the crystal structure of (I) along (top) [100] and (bottom) [010] crystallographic directions. Cl–H distances in the range from 2.45 to 2.70 Å are shown with dashed lines.

Crystal data

[Co(C2H8N2)3]Cl2 Dx = 1.451 Mg m3
Mr = 310.14 Melting point: not measured K
Orthorhombic, Pbca Cu Kα radiation, λ = 1.54178 Å
a = 8.1590 (8) Å Cell parameters from 6618 reflections
b = 17.047 (3) Å θ = 4.3–71.0°
c = 20.3974 (14) Å µ = 12.81 mm1
V = 2837.0 (6) Å3 T = 90 K
Z = 8 Irregular, yellow
F(000) = 1304 0.31 × 0.17 × 0.15 mm

Data collection

Bruker APEXII CCD diffractometer 2700 independent reflections
Radiation source: fine-focus sealed tube 2437 reflections with I > 2σ(I)
Graphite monochromator Rint = 0.042
φ and ω scans θmax = 72.0°, θmin = 4.3°
Absorption correction: multi-scan (SADABS; Bruker, 2003) h = −9→9
Tmin = 0.109, Tmax = 0.243 k = −19→20
17930 measured reflections l = −24→18

Refinement

Refinement on F2 Primary atom site location: structure-invariant direct methods
Least-squares matrix: full Secondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.024 Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.059 All H-atom parameters refined
S = 1.06 w = 1/[σ2(Fo2) + (0.0273P)2 + 1.3198P] where P = (Fo2 + 2Fc2)/3
2700 reflections (Δ/σ)max = 0.001
232 parameters Δρmax = 0.26 e Å3
0 restraints Δρmin = −0.37 e Å3

Special details

Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.

Fractional atomic coordinates and isotropic or equivalent isotropic displacement parameters (Å2)

x y z Uiso*/Ueq
Co 0.22206 (3) 0.636475 (16) 0.101937 (14) 0.01130 (9)
Cl1 0.22916 (5) 0.38557 (2) 0.02211 (2) 0.01517 (10)
Cl2 0.19514 (5) 0.63342 (2) 0.32464 (2) 0.01878 (11)
N1 0.31525 (19) 0.56644 (9) 0.18154 (8) 0.0144 (3)
H1A 0.419 (3) 0.5613 (12) 0.1780 (10) 0.021 (6)*
H1B 0.297 (3) 0.5888 (15) 0.2164 (12) 0.023 (6)*
N2 0.04364 (19) 0.54264 (9) 0.09943 (8) 0.0155 (3)
H2A −0.051 (3) 0.5597 (13) 0.0934 (10) 0.019 (6)*
H2B 0.068 (3) 0.5088 (13) 0.0683 (11) 0.023 (6)*
C1 0.2324 (2) 0.48967 (10) 0.18119 (9) 0.0169 (4)
H1C 0.238 (2) 0.4648 (12) 0.2236 (10) 0.014 (5)*
H1D 0.285 (2) 0.4581 (12) 0.1472 (10) 0.016 (5)*
C2 0.0533 (2) 0.50142 (11) 0.16281 (9) 0.0167 (4)
H2C 0.003 (2) 0.5343 (12) 0.1971 (10) 0.020 (5)*
H2D 0.001 (2) 0.4511 (12) 0.1614 (10) 0.018 (5)*
N6 0.37572 (19) 0.57543 (9) 0.03100 (8) 0.0156 (3)
H5B 0.044 (3) 0.6765 (13) 0.0010 (10) 0.023 (6)*
H5A 0.135 (3) 0.7409 (15) 0.0172 (10) 0.024 (6)*
N5 0.14074 (19) 0.69328 (9) 0.01218 (8) 0.0152 (3)
H6A 0.474 (3) 0.5868 (13) 0.0328 (10) 0.020 (5)*
H6B 0.372 (3) 0.5247 (15) 0.0387 (11) 0.029 (6)*
C5 0.2573 (2) 0.67473 (11) −0.04124 (9) 0.0179 (4)
H5D 0.351 (2) 0.7073 (12) −0.0344 (9) 0.016 (5)*
H5C 0.211 (2) 0.6829 (13) −0.0850 (11) 0.021 (5)*
C6 0.3113 (2) 0.59006 (11) −0.03548 (9) 0.0182 (4)
H6D 0.217 (2) 0.5559 (11) −0.0402 (9) 0.008 (4)*
H6C 0.391 (3) 0.5790 (12) −0.0690 (10) 0.019 (5)*
N3 0.38406 (18) 0.73377 (9) 0.12091 (8) 0.0146 (3)
H3A 0.385 (2) 0.7681 (13) 0.0886 (10) 0.016 (5)*
H3B 0.478 (3) 0.7190 (13) 0.1278 (11) 0.023 (6)*
N4 0.07178 (18) 0.70245 (9) 0.17074 (8) 0.0155 (3)
H4B −0.032 (3) 0.7045 (13) 0.1610 (10) 0.027 (6)*
H4A 0.079 (3) 0.6796 (14) 0.2080 (11) 0.026 (6)*
C3 0.3253 (2) 0.77480 (11) 0.17991 (9) 0.0175 (4)
H3D 0.353 (2) 0.7452 (12) 0.2186 (9) 0.011 (5)*
H3C 0.374 (2) 0.8260 (12) 0.1837 (9) 0.016 (5)*
C4 0.1402 (2) 0.78212 (10) 0.17682 (10) 0.0178 (4)
H4C 0.109 (2) 0.8107 (12) 0.1386 (10) 0.018 (5)*
H4D 0.097 (3) 0.8110 (12) 0.2159 (10) 0.020 (5)*

Atomic displacement parameters (Å2)

U11 U22 U33 U12 U13 U23
Co 0.00953 (15) 0.00972 (15) 0.01465 (16) −0.00031 (10) −0.00038 (10) 0.00023 (10)
Cl1 0.0154 (2) 0.0123 (2) 0.0178 (2) −0.00106 (14) −0.00053 (15) 0.00024 (15)
Cl2 0.0122 (2) 0.0245 (2) 0.0197 (2) 0.00031 (15) 0.00082 (16) −0.00254 (17)
N1 0.0125 (8) 0.0140 (7) 0.0166 (8) 0.0004 (6) −0.0007 (6) −0.0010 (6)
N2 0.0127 (8) 0.0134 (8) 0.0204 (9) 0.0004 (6) −0.0011 (6) −0.0001 (6)
C1 0.0196 (9) 0.0125 (9) 0.0186 (9) −0.0005 (7) −0.0005 (7) 0.0022 (7)
C2 0.0176 (9) 0.0119 (8) 0.0207 (10) −0.0024 (7) 0.0022 (7) 0.0013 (7)
N6 0.0120 (8) 0.0138 (8) 0.0211 (8) 0.0009 (6) 0.0007 (6) 0.0007 (6)
N5 0.0133 (7) 0.0118 (8) 0.0204 (8) 0.0009 (6) −0.0020 (6) −0.0005 (6)
C5 0.0184 (9) 0.0175 (9) 0.0177 (10) −0.0011 (7) −0.0012 (7) 0.0010 (7)
C6 0.0189 (9) 0.0177 (9) 0.0181 (10) 0.0006 (7) 0.0022 (8) −0.0030 (7)
N3 0.0114 (7) 0.0136 (7) 0.0189 (8) −0.0005 (6) −0.0006 (6) 0.0020 (6)
N4 0.0132 (8) 0.0129 (7) 0.0205 (9) −0.0011 (6) 0.0019 (6) 0.0000 (6)
C3 0.0201 (9) 0.0125 (9) 0.0198 (10) −0.0034 (7) −0.0015 (7) 0.0003 (7)
C4 0.0210 (9) 0.0106 (8) 0.0217 (10) 0.0001 (7) 0.0023 (8) −0.0001 (7)

Geometric parameters (Å, º)

Co—N1 2.1540 (15) N5—C5 1.480 (2)
Co—N3 2.1558 (15) N5—H5B 0.87 (2)
Co—N2 2.1635 (15) N5—H5A 0.82 (2)
Co—N5 2.1748 (15) C5—C6 1.514 (3)
Co—N4 2.1767 (15) C5—H5D 0.95 (2)
Co—N6 2.1791 (16) C5—H5C 0.98 (2)
N1—C1 1.473 (2) C6—H6D 0.967 (19)
N1—H1A 0.86 (2) C6—H6C 0.96 (2)
N1—H1B 0.82 (2) N3—C3 1.472 (2)
N2—C2 1.473 (2) N3—H3A 0.88 (2)
N2—H2A 0.83 (2) N3—H3B 0.82 (2)
N2—H2B 0.88 (2) N4—C4 1.474 (2)
C1—C2 1.522 (2) N4—H4B 0.87 (2)
C1—H1C 0.96 (2) N4—H4A 0.85 (2)
C1—H1D 0.98 (2) C3—C4 1.517 (2)
C2—H2C 0.99 (2) C3—H3D 0.963 (19)
C2—H2D 0.96 (2) C3—H3C 0.96 (2)
N6—C6 1.475 (2) C4—H4C 0.95 (2)
N6—H6A 0.83 (2) C4—H4D 1.00 (2)
N6—H6B 0.88 (3)
N1—Co—N3 94.28 (6) H6A—N6—H6B 105 (2)
N1—Co—N2 81.11 (6) C5—N5—Co 109.18 (11)
N3—Co—N2 170.27 (6) C5—N5—H5B 108.7 (14)
N1—Co—N5 171.51 (6) Co—N5—H5B 110.5 (14)
N3—Co—N5 89.75 (6) C5—N5—H5A 109.8 (15)
N2—Co—N5 95.97 (6) Co—N5—H5A 110.6 (15)
N1—Co—N4 89.95 (6) H5B—N5—H5A 108 (2)
N3—Co—N4 80.33 (6) N5—C5—C6 109.49 (15)
N2—Co—N4 91.05 (6) N5—C5—H5D 106.3 (12)
N5—Co—N4 98.10 (6) C6—C5—H5D 108.2 (12)
N1—Co—N6 91.88 (6) N5—C5—H5C 113.1 (12)
N3—Co—N6 97.69 (6) C6—C5—H5C 108.5 (13)
N2—Co—N6 91.05 (6) H5D—C5—H5C 111.1 (17)
N5—Co—N6 80.17 (6) N6—C6—C5 109.64 (15)
N4—Co—N6 177.41 (6) N6—C6—H6D 105.8 (11)
C1—N1—Co 109.07 (11) C5—C6—H6D 109.6 (11)
C1—N1—H1A 111.3 (14) N6—C6—H6C 112.2 (12)
Co—N1—H1A 110.0 (14) C5—C6—H6C 109.1 (13)
C1—N1—H1B 109.6 (16) H6D—C6—H6C 110.4 (16)
Co—N1—H1B 109.5 (16) C3—N3—Co 108.21 (11)
H1A—N1—H1B 107 (2) C3—N3—H3A 107.4 (13)
C2—N2—Co 107.21 (11) Co—N3—H3A 112.6 (13)
C2—N2—H2A 110.2 (14) C3—N3—H3B 108.1 (16)
Co—N2—H2A 111.6 (15) Co—N3—H3B 111.7 (15)
C2—N2—H2B 108.0 (14) H3A—N3—H3B 109 (2)
Co—N2—H2B 110.4 (14) C4—N4—Co 108.49 (11)
H2A—N2—H2B 109 (2) C4—N4—H4B 110.5 (15)
N1—C1—C2 108.96 (14) Co—N4—H4B 114.9 (15)
N1—C1—H1C 111.3 (12) C4—N4—H4A 108.7 (16)
C2—C1—H1C 109.1 (12) Co—N4—H4A 107.5 (15)
N1—C1—H1D 106.9 (12) H4B—N4—H4A 107 (2)
C2—C1—H1D 108.7 (11) N3—C3—C4 109.24 (15)
H1C—C1—H1D 111.9 (16) N3—C3—H3D 110.2 (11)
N2—C2—C1 109.29 (15) C4—C3—H3D 108.0 (11)
N2—C2—H2C 109.2 (12) N3—C3—H3C 111.2 (12)
C1—C2—H2C 107.6 (12) C4—C3—H3C 110.0 (12)
N2—C2—H2D 112.1 (12) H3D—C3—H3C 108.2 (16)
C1—C2—H2D 108.4 (12) N4—C4—C3 107.74 (14)
H2C—C2—H2D 110.2 (17) N4—C4—H4C 107.6 (12)
C6—N6—Co 108.95 (11) C3—C4—H4C 109.8 (12)
C6—N6—H6A 110.3 (15) N4—C4—H4D 112.8 (12)
Co—N6—H6A 114.7 (15) C3—C4—H4D 110.8 (12)
C6—N6—H6B 108.5 (14) H4C—C4—H4D 108.0 (16)
Co—N6—H6B 109.3 (14)

Hydrogen-bond geometry (Å, º)

D—H···A D—H H···A D···A D—H···A
N1—H1B···Cl2 0.82 (2) 2.48 (3) 3.2839 (17) 167 (2)
N1—H1A···Cl2i 0.86 (2) 2.57 (2) 3.3056 (16) 145.4 (18)
N2—H2A···Cl1ii 0.83 (2) 2.92 (2) 3.5494 (16) 133.6 (17)
N2—H2A···Cl2iii 0.83 (2) 2.94 (2) 3.5887 (17) 135.8 (17)
N2—H2B···Cl1 0.88 (2) 2.65 (2) 3.4566 (17) 152.5 (18)
N5—H5B···Cl1ii 0.87 (2) 2.51 (2) 3.3770 (16) 173.1 (19)
N5—H5A···Cl1iv 0.82 (2) 2.70 (2) 3.4514 (18) 152.4 (19)
N6—H6B···Cl1 0.88 (3) 2.66 (3) 3.4552 (18) 150.3 (19)
N6—H6A···Cl1v 0.83 (2) 2.71 (2) 3.4653 (16) 152.9 (19)
N3—H3A···Cl1iv 0.88 (2) 2.59 (2) 3.4075 (17) 154.2 (17)
N3—H3B···Cl2i 0.82 (2) 2.49 (2) 3.2560 (16) 156 (2)
N4—H4A···Cl2 0.85 (2) 2.68 (2) 3.5003 (17) 161 (2)
N4—H4B···Cl2iii 0.87 (2) 2.55 (2) 3.2919 (16) 143.5 (19)

Symmetry codes: (i) x+1/2, y, −z+1/2; (ii) −x, −y+1, −z; (iii) x−1/2, y, −z+1/2; (iv) −x+1/2, y+1/2, z; (v) −x+1, −y+1, −z.

Footnotes

Supplementary data and figures for this paper are available from the IUCr electronic archives (Reference: HB7079).

References

  1. Bruker (2003). APEX2, SAINT and SADABS Bruker AXS Inc., Madison, Wisconsin, USA.
  2. Macrae, C. F., Bruno, I. J., Chisholm, J. A., Edgington, P. R., McCabe, P., Pidcock, E., Rodriguez-Monge, L., Taylor, R., van de Streek, J. & Wood, P. A. (2008). J. Appl. Cryst. 41, 466–470.
  3. Sheldrick, G. M. (2008). Acta Cryst. A64, 112–122. [DOI] [PubMed]
  4. Takamizawa, S., Akatsuka, T. & Ueda, T. (2008). Angew. Chem. Int. Ed. 47, 1689–1692. [DOI] [PubMed]

Associated Data

This section collects any data citations, data availability statements, or supplementary materials included in this article.

Supplementary Materials

Crystal structure: contains datablock(s) I, global. DOI: 10.1107/S1600536813013135/hb7079sup1.cif

e-69-0m332-sup1.cif (17.7KB, cif)

Structure factors: contains datablock(s) I. DOI: 10.1107/S1600536813013135/hb7079Isup2.hkl

e-69-0m332-Isup2.hkl (132.7KB, hkl)

Additional supplementary materials: crystallographic information; 3D view; checkCIF report


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