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Acta Crystallographica Section E: Structure Reports Online logoLink to Acta Crystallographica Section E: Structure Reports Online
. 2013 May 4;69(Pt 6):o818. doi: 10.1107/S1600536813011380

1,3-Bis(2-methyl­prop-2-eno­yl)-1H-benz­imidazol-2(3H)-one

N Haridharan a,*, V Ramkumar b
PMCID: PMC3684908  PMID: 23795010

Abstract

The mol­ecules of the title compound, C15H14N2O3, possesses crystallographically imposed twofold rotational symmetry, so the asymmetric unit contains one half-mol­ecule. The fused-ring system deviates significantly from planarity; the planes of the five- and six-membered rings are twisted with respect to each other by 3.0 (1)°. In the crystal, weak C—H⋯O hydrogen bonds link mol­ecules related by translation in [010] into chains.

Related literature  

For applications of substituted benzimidazoles, see: Gravatt et al. (1994); Srikanth et al. (2011). For the crystal structures of related compounds, see: Ouzidan et al. (2011); Kandri Rodi et al. (2011).graphic file with name e-69-0o818-scheme1.jpg

Experimental  

Crystal data  

  • C15H14N2O3

  • M r = 270.28

  • Monoclinic, Inline graphic

  • a = 16.6359 (9) Å

  • b = 8.8629 (5) Å

  • c = 9.6221 (4) Å

  • β = 102.775 (2)°

  • V = 1383.59 (12) Å3

  • Z = 4

  • Mo Kα radiation

  • μ = 0.09 mm−1

  • T = 298 K

  • 0.22 × 0.18 × 0.10 mm

Data collection  

  • Bruker APEXII CCD area-detector diffractometer

  • Absorption correction: multi-scan (SADABS; Bruker, 2004) T min = 0.980, T max = 0.991

  • 4086 measured reflections

  • 1165 independent reflections

  • 1042 reflections with I > 2σ(I)

  • R int = 0.014

Refinement  

  • R[F 2 > 2σ(F 2)] = 0.057

  • wR(F 2) = 0.208

  • S = 1.16

  • 1165 reflections

  • 93 parameters

  • 2 restraints

  • H-atom parameters constrained

  • Δρmax = 0.41 e Å−3

  • Δρmin = −0.36 e Å−3

Data collection: APEX2 (Bruker, 2004); cell refinement: SAINT-Plus (Bruker, 2004); data reduction: SAINT-Plus; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008); molecular graphics: ORTEP-3 for Windows (Farrugia, 2012); software used to prepare material for publication: SHELXL97.

Supplementary Material

Crystal structure: contains datablock(s) global, I. DOI: 10.1107/S1600536813011380/cv5390sup1.cif

e-69-0o818-sup1.cif (14KB, cif)

Structure factors: contains datablock(s) I. DOI: 10.1107/S1600536813011380/cv5390Isup2.hkl

e-69-0o818-Isup2.hkl (57.7KB, hkl)

Supplementary material file. DOI: 10.1107/S1600536813011380/cv5390Isup3.cml

Additional supplementary materials: crystallographic information; 3D view; checkCIF report

Table 1. Hydrogen-bond geometry (Å, °).

D—H⋯A D—H H⋯A DA D—H⋯A
C1—H1⋯O1i 0.93 2.57 3.193 (3) 124

Symmetry code: (i) Inline graphic.

Acknowledgments

The authors acknowledge the Department of Chemistry, IIT Madras, for the data collection.

supplementary crystallographic information

Comment

Substituted benzimidazole derivatives have found wide range of therapeutic and pharmacological applications (Gravatt et al., 1994; Srikanth et al., 2011). Herewith we present the title compound, (I), which is a new derivative of benzimidazole.

In (I) (Fig. 1), all bond lengths and angles are normal and comparable with those reported for related compounds (Ouzidan et al., 2011; Kandri Rodi et al., 2011). The molecules in (I) possess a crystallographically imposed twofold rotational symmetry, with half of the molecule in the assymetric unit. The five- and six-membered rings are twisted with a dihedral angle of 3.0 (1)°.

In the crystal, weak intermolecular C—H···O hydrogen bonds (Table 1) link the molecules related by translation in [010] into chains.

Experimental

2-Hydroxy benzimidazole (1 g, 0.007 moles) and THF (100 ml) were placed in a 3-neck round bottomed flask. Methacrylic anhydride (2.29 g, 0.014 moles) was added slowly, using a syringe, with stirring. The mixture was allowed to cool to 0 °C using ice-salt mixture with stirring. The mixture was treated with sodium hydroxide (0.56 g, 0.014 moles) drop by drop and the amide formation reaction was allowed to stir for 6 h at RT. The resulting crude product was dissolved in ethyl acetate, washed with bicarbonate solution and then with water thrice followed by brine solution and dried over anhydrous sodium sulfate. The resulting solvent was removed by rotary evaporation. The product was purified by column chromatography technique using 12% ethyl acetate in hexane as the eluent to obtain a product as a bright white solid. Recrystallization of the compound from acetone gave X-ray diffraction quality crystals of (I).

Refinement

All hydrogen atoms were fixed geometrically and allowed to ride on the parent carbon atoms with aromatic C—H = 0.93 Å, methylene C—H = 0.97 Å and methyl C—H = 0.96 Å. The displacement parameters were set as Uiso(H) = 1.2–1.5 Ueq(C).

Figures

Fig. 1.

Fig. 1.

View of (I) showing the atomic numbering and 50% probability displacement ellipsoids [symmetry code: -x, y, 1/2 - z].

Crystal data

C15H14N2O3 F(000) = 568
Mr = 270.28 Dx = 1.298 Mg m3
Monoclinic, C2/c Mo Kα radiation, λ = 0.71073 Å
Hall symbol: -C 2yc Cell parameters from 3023 reflections
a = 16.6359 (9) Å θ = 2.6–28.4°
b = 8.8629 (5) Å µ = 0.09 mm1
c = 9.6221 (4) Å T = 298 K
β = 102.775 (2)° Prism, colourless
V = 1383.59 (12) Å3 0.22 × 0.18 × 0.10 mm
Z = 4

Data collection

Bruker APEXII CCD area-detector diffractometer 1165 independent reflections
Radiation source: fine-focus sealed tube 1042 reflections with I > 2σ(I)
Graphite monochromator Rint = 0.014
phi and ω scans θmax = 25.0°, θmin = 3.2°
Absorption correction: multi-scan (SADABS; Bruker, 2004) h = −16→19
Tmin = 0.980, Tmax = 0.991 k = −10→10
4086 measured reflections l = −11→7

Refinement

Refinement on F2 Primary atom site location: structure-invariant direct methods
Least-squares matrix: full Secondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.057 Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.208 H-atom parameters constrained
S = 1.16 w = 1/[σ2(Fo2) + (0.1442P)2 + 0.5014P] where P = (Fo2 + 2Fc2)/3
1165 reflections (Δ/σ)max < 0.001
93 parameters Δρmax = 0.41 e Å3
2 restraints Δρmin = −0.36 e Å3

Special details

Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.

Fractional atomic coordinates and isotropic or equivalent isotropic displacement parameters (Å2)

x y z Uiso*/Ueq
C1 0.47013 (18) 0.8707 (3) 0.7898 (4) 0.0750 (10)
H1 0.4508 0.9622 0.8167 0.090*
C2 0.43851 (17) 0.7372 (3) 0.8301 (3) 0.0601 (8)
H2 0.3981 0.7370 0.8832 0.072*
C3 0.46936 (12) 0.6045 (2) 0.7882 (2) 0.0444 (6)
C4 0.5000 0.3574 (3) 0.7500 0.0437 (8)
C5 0.38571 (13) 0.4045 (2) 0.8743 (2) 0.0461 (7)
C6 0.34437 (13) 0.2572 (2) 0.8323 (2) 0.0529 (7)
N1 0.44820 (10) 0.45224 (19) 0.80638 (19) 0.0430 (6)
O1 0.5000 0.2222 (2) 0.7500 0.0654 (8)
O2 0.36526 (12) 0.4856 (2) 0.9606 (2) 0.0703 (7)
C7 0.31257 (19) 0.2319 (4) 0.6791 (2) 0.0781 (10)
H7A 0.3577 0.2117 0.6345 0.117*
H7B 0.2836 0.3201 0.6371 0.117*
H7C 0.2757 0.1472 0.6655 0.117*
C8 0.3311 (2) 0.1649 (4) 0.9330 (3) 0.0889 (11)
H8A 0.2999 0.0779 0.9084 0.107*
H8B 0.3529 0.1870 1.0284 0.107*

Atomic displacement parameters (Å2)

U11 U22 U33 U12 U13 U23
C1 0.0787 (19) 0.0326 (12) 0.117 (3) 0.0049 (10) 0.0282 (17) −0.0064 (13)
C2 0.0603 (15) 0.0416 (13) 0.0812 (19) 0.0069 (10) 0.0217 (14) −0.0045 (11)
C3 0.0411 (11) 0.0326 (12) 0.0578 (14) 0.0014 (7) 0.0071 (10) 0.0007 (8)
C4 0.0413 (15) 0.0329 (14) 0.0592 (19) 0.000 0.0162 (13) 0.000
C5 0.0396 (11) 0.0463 (13) 0.0546 (14) 0.0070 (8) 0.0152 (10) 0.0035 (9)
C6 0.0398 (12) 0.0520 (13) 0.0710 (17) −0.0020 (9) 0.0208 (11) 0.0046 (10)
N1 0.0389 (9) 0.0329 (10) 0.0599 (12) 0.0014 (6) 0.0166 (8) 0.0003 (7)
O1 0.0647 (16) 0.0316 (13) 0.111 (2) 0.000 0.0435 (15) 0.000
O2 0.0726 (13) 0.0674 (12) 0.0816 (14) 0.0023 (9) 0.0399 (11) −0.0090 (9)
C7 0.0629 (17) 0.077 (2) 0.089 (2) −0.0211 (13) 0.0050 (16) 0.0023 (15)
C8 0.100 (2) 0.081 (2) 0.095 (2) −0.0197 (18) 0.0398 (19) 0.0097 (17)

Geometric parameters (Å, º)

C1—C1i 1.382 (6) C5—O2 1.203 (3)
C1—C2 1.385 (4) C5—N1 1.410 (3)
C1—H1 0.9300 C5—C6 1.489 (3)
C2—C3 1.378 (3) C6—C8 1.3242 (19)
C2—H2 0.9300 C6—C7 1.4689 (19)
C3—C3i 1.383 (4) C7—H7A 0.9600
C3—N1 1.415 (3) C7—H7B 0.9600
C4—O1 1.198 (4) C7—H7C 0.9600
C4—N1 1.397 (2) C8—H8A 0.9300
C4—N1i 1.397 (2) C8—H8B 0.9300
C1i—C1—C2 121.28 (17) C8—C6—C7 124.0 (3)
C1i—C1—H1 119.4 C8—C6—C5 119.0 (2)
C2—C1—H1 119.4 C7—C6—C5 116.65 (19)
C3—C2—C1 117.3 (3) C4—N1—C5 125.50 (19)
C3—C2—H2 121.4 C4—N1—C3 109.53 (17)
C1—C2—H2 121.4 C5—N1—C3 124.95 (17)
C2—C3—C3i 121.42 (15) C6—C7—H7A 109.5
C2—C3—N1 131.2 (2) C6—C7—H7B 109.5
C3i—C3—N1 107.37 (11) H7A—C7—H7B 109.5
O1—C4—N1 127.01 (12) C6—C7—H7C 109.5
O1—C4—N1i 127.01 (12) H7A—C7—H7C 109.5
N1—C4—N1i 106.0 (2) H7B—C7—H7C 109.5
O2—C5—N1 119.4 (2) C6—C8—H8A 120.0
O2—C5—C6 121.8 (2) C6—C8—H8B 120.0
N1—C5—C6 118.77 (18) H8A—C8—H8B 120.0
C1i—C1—C2—C3 0.3 (6) N1i—C4—N1—C3 −1.51 (11)
C1—C2—C3—C3i 1.4 (5) O2—C5—N1—C4 153.7 (2)
C1—C2—C3—N1 −177.0 (2) C6—C5—N1—C4 −28.9 (3)
O2—C5—C6—C8 −46.6 (4) O2—C5—N1—C3 −24.6 (3)
N1—C5—C6—C8 136.0 (3) C6—C5—N1—C3 152.8 (2)
O2—C5—C6—C7 126.7 (3) C2—C3—N1—C4 −177.4 (2)
N1—C5—C6—C7 −50.7 (3) C3i—C3—N1—C4 4.0 (3)
O1—C4—N1—C5 0.0 (2) C2—C3—N1—C5 1.1 (4)
N1i—C4—N1—C5 180.0 (2) C3i—C3—N1—C5 −177.4 (2)
O1—C4—N1—C3 178.48 (11)

Symmetry code: (i) −x+1, y, −z+3/2.

Hydrogen-bond geometry (Å, º)

D—H···A D—H H···A D···A D—H···A
C1—H1···O1ii 0.93 2.57 3.193 (3) 124

Symmetry code: (ii) x, y+1, z.

Footnotes

Supplementary data and figures for this paper are available from the IUCr electronic archives (Reference: CV5390).

References

  1. Bruker (2004). APEX2, SAINT-Plus and SADABS Bruker AXS Inc., Madison, Wisconsin, USA.
  2. Farrugia, L. J. (2012). J. Appl. Cryst. 45, 849–854.
  3. Gravatt, G. L., Baguley, B. C., Wilson, W. R. & Denny, W. A. (1994). J. Med. Chem. 37, 4338–4345. [DOI] [PubMed]
  4. Kandri Rodi, Y., Ouazzani Chahdi, F., Essassi, E. M., Luis, S. V., Bolte, M. & El Ammari, L. (2011). Acta Cryst. E67, o3234. [DOI] [PMC free article] [PubMed]
  5. Ouzidan, Y., Kandri Rodi, Y., Jasinski, J. P., Butcher, R. J., Golen, J. A. & El Ammari, L. (2011). Acta Cryst. E67, o1091. [DOI] [PMC free article] [PubMed]
  6. Sheldrick, G. M. (2008). Acta Cryst. A64, 112–122. [DOI] [PubMed]
  7. Srikanth, L., Varunraj, V., Raghunandar, N. & Venkateshwerlu, L. (2011). Pharma Chem. 3, 172–193.

Associated Data

This section collects any data citations, data availability statements, or supplementary materials included in this article.

Supplementary Materials

Crystal structure: contains datablock(s) global, I. DOI: 10.1107/S1600536813011380/cv5390sup1.cif

e-69-0o818-sup1.cif (14KB, cif)

Structure factors: contains datablock(s) I. DOI: 10.1107/S1600536813011380/cv5390Isup2.hkl

e-69-0o818-Isup2.hkl (57.7KB, hkl)

Supplementary material file. DOI: 10.1107/S1600536813011380/cv5390Isup3.cml

Additional supplementary materials: crystallographic information; 3D view; checkCIF report


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