Abstract
In the title compound, C11H9NO3, the phenyl and isoxazole rings form a dihedral angle of 56.64 (8)°. The carboxy group is almost in the same plane as the isoxazole ring with a C—C—C—O torsion angle of −3.3 (2)°. In the crystal, pairs of O—H⋯O hydrogen bonds link the molecules into head-to-head dimers. C—H⋯N hydrogen bonds and π–π stacking interactions between phenyl rings [centroid–centroid distance = 3.9614 (17)Å] link the dimers into a three-dimensional network.
Related literature
For the biological and pharmaceutical importance of isoxazoles, see: Basappa et al., (2003 ▶); Conti et al. (1998 ▶); Kang et al. (2000 ▶); Lee et al. (2009 ▶); Shin et al. (2005 ▶); Stevens & Albizati (1984 ▶). For bond-length and angle data in related structures, see: Wolf et al. (1995 ▶); Chandra et al., (2013 ▶).
Experimental
Crystal data
C11H9NO3
M r = 203.19
Monoclinic,
a = 11.953 (4) Å
b = 5.981 (2) Å
c = 14.142 (5) Å
β = 105.548 (6)°
V = 974.0 (6) Å3
Z = 4
Mo Kα radiation
μ = 0.10 mm−1
T = 273 K
0.30 × 0.25 × 0.20 mm
Data collection
Bruker APEXII CCD area-detector diffractometer
8619 measured reflections
1712 independent reflections
1558 reflections with I > 2σ(I)
R int = 0.026
Refinement
R[F 2 > 2σ(F 2)] = 0.039
wR(F 2) = 0.111
S = 1.05
1712 reflections
138 parameters
H-atom parameters constrained
Δρmax = 0.19 e Å−3
Δρmin = −0.14 e Å−3
Data collection: APEX2 (Bruker, 2009 ▶); cell refinement: SAINT (Bruker, 2009 ▶); data reduction: SAINT; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: PLATON (Spek, 2009 ▶); software used to prepare material for publication: SHELXL97.
Supplementary Material
Crystal structure: contains datablock(s) global, I. DOI: 10.1107/S1600536813011410/bg2504sup1.cif
Structure factors: contains datablock(s) I. DOI: 10.1107/S1600536813011410/bg2504Isup2.hkl
Supplementary material file. DOI: 10.1107/S1600536813011410/bg2504Isup3.cml
Additional supplementary materials: crystallographic information; 3D view; checkCIF report
Table 1. Hydrogen-bond geometry (Å, °).
D—H⋯A | D—H | H⋯A | D⋯A | D—H⋯A |
---|---|---|---|---|
O14—H14⋯O15i | 0.82 | 1.81 | 2.6252 (18) | 172 |
C11—H11A⋯N8ii | 0.96 | 2.51 | 3.427 (2) | 159 |
Symmetry codes: (i) ; (ii)
.
Acknowledgments
The authors would like to thank the UGC, New Delhi, Government of India, for awarding a project under the head F·No.41–920/2012(SR) dated: 25–07-2012.
supplementary crystallographic information
Comment
Isoxazole derivatives bearing various substituents are known to have diverse biological and pharmaceutical activities; such as anti-tumor (Kang et al., 2000), antiviral (Lee et al., 2009), hypoglycemic (Conti et al., 1998), antifungal (Basappa et al., 2003) and anti-HIV activities (Shin et al., 2005). In addition, isoxazoles and related compounds have attracted much interest because of their fungicidal, plant-growth regulating and antibacterial activities (Stevens & Albizati, 1984). As part of our interest in these compounds and our extensive background on isoxazole derivatives, we have synthesized the title compound to study its crystal structure.
Fig. 1 presents an ellipsoid plot of the title compound (I). The (C7/N8/O9/C10/C12) isoxazole ring is in Syn-Clinal conformation with respect to the (C1-C2-C3-C4-C5-C6) phenyl ring, as indicated by the (C1-C6-C7-N8) torsion angle of -54.40 (19)°. The carboxylic acid group at C12 is almost in the same plane as the isoxazole ring (C7-C12-C13-O15 torsion angle = -3.3 (2)°). The bond lengths and angles are within normal ranges and are comparable to related structure (Wolf et al., 1995 & Chandra et al., 2013). The crystal structure is stabilized by O—H···O bonds (Table 1), which define head to head dimers, and weaker C-H···N bonds (Table 1), thus defining planes parallel to (101) (Fig 2). Finally, there are π···π stacking interacions between phenyl rings with Cg···Cg[1-x,1-y,-z] and slippage displacement distances of 3.9614 (17)Å and 1.284Å respectively (Fig 3) which link planes into a 3D structure.
Experimental
A mixture of benzaldehyde oxime (1 mmol), ethyl acetoacetate (2 mmol) and anhydrous zinc chloride (0.1 mmol) were taken in a 10 ml round bottomed flask and the contents were gradually heated to 60°C without any solvent for about one hour. After completion of the reaction (as indicated by TLC), the mixture was cooled to room temperature and ethanol was added with stirring for about 30 min. The solid ethyl 5-methyl-3-phenylisoxazole-4-carboxylate thus obtained was treated with 5% NaOH (10 ml) at room temperature for about 4hr. After completion of the reaction (as indicated by TLC), the reaction mixture was acidified with 2 N HCl. The solids thus obtained were filtered and recrystalized from hot ethanol to get crystals of the title compound.
Refinement
H atoms were placed at idealized positions and allowed to ride on their parent atoms with C–H distances in the range of 0.93 to 0.96 Å; Uiso(H) = 1.2Ueq(carrier atom) for all H atoms.
Figures
Fig. 1.
Perspective diagram of the molecule with 50% probability displacement ellipsoids.
Fig. 2.
Packing diagram of the molecule viewed down the 'b' axis, showing the H-bonded dimers.
Fig. 3.
Packing diagram of the molecule viewed down the 'b' axis, showing the π–π interactions.
Crystal data
C11H9NO3 | F(000) = 424 |
Mr = 203.19 | Dx = 1.386 Mg m−3 |
Monoclinic, P21/n | Mo Kα radiation, λ = 0.71073 Å |
Hall symbol: -P 2yn | Cell parameters from 1712 reflections |
a = 11.953 (4) Å | θ = 2.0–25.0° |
b = 5.981 (2) Å | µ = 0.10 mm−1 |
c = 14.142 (5) Å | T = 273 K |
β = 105.548 (6)° | Block, yellow |
V = 974.0 (6) Å3 | 0.30 × 0.25 × 0.20 mm |
Z = 4 |
Data collection
Bruker APEXII CCD area-detector diffractometer | Rint = 0.026 |
ω and φ scans | θmax = 25.0°, θmin = 2.0° |
8619 measured reflections | h = −14→14 |
1712 independent reflections | k = −7→7 |
1558 reflections with I > 2σ(I) | l = −16→16 |
Refinement
Refinement on F2 | Secondary atom site location: difference Fourier map |
Least-squares matrix: full | Hydrogen site location: inferred from neighbouring sites |
R[F2 > 2σ(F2)] = 0.039 | H-atom parameters constrained |
wR(F2) = 0.111 | w = 1/[σ2(Fo2) + (0.0647P)2 + 0.1799P] where P = (Fo2 + 2Fc2)/3 |
S = 1.05 | (Δ/σ)max = 0.001 |
1712 reflections | Δρmax = 0.19 e Å−3 |
138 parameters | Δρmin = −0.14 e Å−3 |
0 restraints | Extinction correction: SHELXL97 (Sheldrick, 2008), FC*=KFC[1+0.001XFC2Λ3/SIN(2Θ)]-1/4 |
Primary atom site location: structure-invariant direct methods | Extinction coefficient: 0.078 (6) |
Special details
Geometry. Bond distances, angles etc. have been calculated using the rounded fractional coordinates. All su's are estimated from the variances of the (full) variance-covariance matrix. The cell e.s.d.'s are taken into account in the estimation of distances, angles and torsion angles |
Refinement. Refinement on F2 for ALL reflections except those flagged by the user for potential systematic errors. Weighted R-factors wR and all goodnesses of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The observed criterion of F2 > σ(F2) is used only for calculating -R-factor-obs etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R-factors based on ALL data will be even larger. |
Fractional atomic coordinates and isotropic or equivalent isotropic displacement parameters (Å2)
x | y | z | Uiso*/Ueq | ||
O9 | 0.78858 (10) | 0.77608 (19) | −0.16618 (8) | 0.0644 (4) | |
O14 | 0.98209 (9) | 0.19333 (19) | −0.09796 (8) | 0.0626 (4) | |
O15 | 0.89662 (9) | 0.16156 (18) | 0.02382 (7) | 0.0583 (4) | |
N8 | 0.72219 (12) | 0.7544 (2) | −0.09692 (10) | 0.0627 (5) | |
C1 | 0.70696 (13) | 0.6540 (3) | 0.10434 (12) | 0.0577 (5) | |
C2 | 0.65298 (14) | 0.6027 (3) | 0.17680 (13) | 0.0667 (6) | |
C3 | 0.59319 (14) | 0.4050 (3) | 0.17315 (12) | 0.0646 (6) | |
C4 | 0.58949 (14) | 0.2546 (3) | 0.09855 (13) | 0.0634 (5) | |
C5 | 0.64525 (13) | 0.3017 (3) | 0.02718 (11) | 0.0556 (5) | |
C6 | 0.70323 (11) | 0.5035 (2) | 0.02904 (9) | 0.0458 (4) | |
C7 | 0.75633 (11) | 0.5675 (2) | −0.05041 (10) | 0.0465 (4) | |
C10 | 0.85935 (12) | 0.6006 (2) | −0.15866 (10) | 0.0503 (4) | |
C11 | 0.93670 (14) | 0.6030 (3) | −0.22477 (11) | 0.0643 (6) | |
C12 | 0.84386 (10) | 0.4605 (2) | −0.08704 (9) | 0.0445 (4) | |
C13 | 0.90974 (11) | 0.2583 (2) | −0.05073 (10) | 0.0454 (4) | |
H1 | 0.74570 | 0.78940 | 0.10620 | 0.0690* | |
H2 | 0.65710 | 0.70230 | 0.22810 | 0.0800* | |
H3 | 0.55530 | 0.37280 | 0.22100 | 0.0780* | |
H4 | 0.54920 | 0.12080 | 0.09630 | 0.0760* | |
H5 | 0.64400 | 0.19820 | −0.02220 | 0.0670* | |
H11A | 0.91180 | 0.49090 | −0.27460 | 0.0960* | |
H11B | 1.01490 | 0.57240 | −0.18750 | 0.0960* | |
H11C | 0.93350 | 0.74740 | −0.25510 | 0.0960* | |
H14 | 1.01490 | 0.07930 | −0.07260 | 0.0940* |
Atomic displacement parameters (Å2)
U11 | U22 | U33 | U12 | U13 | U23 | |
O9 | 0.0729 (7) | 0.0625 (7) | 0.0640 (7) | 0.0040 (5) | 0.0289 (6) | 0.0164 (5) |
O14 | 0.0661 (7) | 0.0664 (7) | 0.0657 (7) | 0.0140 (5) | 0.0357 (5) | 0.0054 (5) |
O15 | 0.0618 (6) | 0.0630 (7) | 0.0569 (6) | 0.0092 (5) | 0.0275 (5) | 0.0080 (5) |
N8 | 0.0654 (8) | 0.0622 (8) | 0.0683 (8) | 0.0096 (6) | 0.0312 (7) | 0.0138 (6) |
C1 | 0.0544 (8) | 0.0569 (9) | 0.0676 (9) | −0.0019 (7) | 0.0264 (7) | −0.0099 (7) |
C2 | 0.0636 (9) | 0.0795 (11) | 0.0660 (10) | 0.0025 (8) | 0.0328 (8) | −0.0163 (8) |
C3 | 0.0604 (9) | 0.0801 (11) | 0.0630 (9) | 0.0064 (8) | 0.0332 (7) | 0.0068 (8) |
C4 | 0.0634 (9) | 0.0615 (9) | 0.0722 (10) | −0.0058 (7) | 0.0304 (8) | 0.0056 (8) |
C5 | 0.0597 (9) | 0.0553 (9) | 0.0559 (8) | −0.0029 (7) | 0.0226 (7) | −0.0044 (7) |
C6 | 0.0397 (7) | 0.0511 (8) | 0.0488 (7) | 0.0059 (5) | 0.0155 (5) | 0.0022 (6) |
C7 | 0.0442 (7) | 0.0481 (7) | 0.0483 (7) | −0.0006 (6) | 0.0142 (6) | 0.0001 (6) |
C10 | 0.0513 (7) | 0.0547 (8) | 0.0459 (7) | −0.0069 (6) | 0.0147 (6) | −0.0019 (6) |
C11 | 0.0708 (10) | 0.0761 (11) | 0.0535 (9) | −0.0162 (8) | 0.0297 (8) | −0.0023 (7) |
C12 | 0.0430 (7) | 0.0496 (7) | 0.0425 (7) | −0.0052 (5) | 0.0145 (5) | −0.0040 (5) |
C13 | 0.0432 (7) | 0.0510 (8) | 0.0449 (7) | −0.0037 (5) | 0.0169 (5) | −0.0059 (6) |
Geometric parameters (Å, º)
O9—N8 | 1.4222 (19) | C7—C12 | 1.4363 (19) |
O9—C10 | 1.3342 (18) | C10—C12 | 1.3649 (19) |
O14—C13 | 1.2863 (18) | C10—C11 | 1.481 (2) |
O15—C13 | 1.2488 (17) | C12—C13 | 1.4593 (18) |
O14—H14 | 0.8200 | C1—H1 | 0.9300 |
N8—C7 | 1.3057 (18) | C2—H2 | 0.9300 |
C1—C2 | 1.384 (2) | C3—H3 | 0.9300 |
C1—C6 | 1.386 (2) | C4—H4 | 0.9300 |
C2—C3 | 1.375 (3) | C5—H5 | 0.9300 |
C3—C4 | 1.378 (3) | C11—H11A | 0.9600 |
C4—C5 | 1.380 (2) | C11—H11B | 0.9600 |
C5—C6 | 1.389 (2) | C11—H11C | 0.9600 |
C6—C7 | 1.4813 (19) | ||
O9···C10i | 3.268 (2) | C10···O15iii | 3.345 (2) |
O9···C11i | 3.351 (2) | C10···C13iii | 3.566 (2) |
O14···O15ii | 2.6252 (18) | C11···O14 | 2.999 (2) |
O14···C11 | 2.999 (2) | C11···O9iv | 3.351 (2) |
O15···C11iii | 3.316 (2) | C11···N8iv | 3.427 (2) |
O15···O14ii | 2.6252 (18) | C11···O15iii | 3.316 (2) |
O15···C13ii | 3.367 (2) | C12···C13iii | 3.496 (2) |
O15···C5 | 3.132 (2) | C13···O15ii | 3.367 (2) |
O15···C6 | 3.102 (2) | C13···C10iii | 3.566 (2) |
O15···C10iii | 3.345 (2) | C13···C12iii | 3.496 (2) |
O9···H11Ai | 2.6500 | C13···H14ii | 2.6600 |
O14···H11B | 2.6800 | H1···N8 | 2.8200 |
O14···H14ii | 2.9000 | H11A···O9iv | 2.6500 |
O15···H11Biii | 2.7700 | H11A···N8iv | 2.5100 |
O15···H14ii | 1.8100 | H11B···O14 | 2.6800 |
N8···C11i | 3.427 (2) | H11B···O15iii | 2.7700 |
N8···H1 | 2.8200 | H14···O14ii | 2.9000 |
N8···H11Ai | 2.5100 | H14···O15ii | 1.8100 |
C5···O15 | 3.132 (2) | H14···C13ii | 2.6600 |
C6···O15 | 3.102 (2) | H14···H14ii | 2.3700 |
C10···O9iv | 3.268 (2) | ||
N8—O9—C10 | 109.41 (11) | O14—C13—C12 | 116.24 (12) |
C13—O14—H14 | 109.00 | O15—C13—C12 | 120.20 (12) |
O9—N8—C7 | 105.56 (12) | O14—C13—O15 | 123.54 (12) |
C2—C1—C6 | 119.97 (16) | C2—C1—H1 | 120.00 |
C1—C2—C3 | 120.23 (16) | C6—C1—H1 | 120.00 |
C2—C3—C4 | 119.98 (16) | C1—C2—H2 | 120.00 |
C3—C4—C5 | 120.28 (16) | C3—C2—H2 | 120.00 |
C4—C5—C6 | 120.02 (15) | C2—C3—H3 | 120.00 |
C1—C6—C7 | 118.88 (12) | C4—C3—H3 | 120.00 |
C5—C6—C7 | 121.56 (12) | C3—C4—H4 | 120.00 |
C1—C6—C5 | 119.49 (13) | C5—C4—H4 | 120.00 |
N8—C7—C6 | 117.63 (12) | C4—C5—H5 | 120.00 |
N8—C7—C12 | 111.06 (12) | C6—C5—H5 | 120.00 |
C6—C7—C12 | 131.31 (11) | C10—C11—H11A | 109.00 |
O9—C10—C11 | 115.59 (12) | C10—C11—H11B | 109.00 |
O9—C10—C12 | 109.44 (12) | C10—C11—H11C | 110.00 |
C11—C10—C12 | 134.94 (13) | H11A—C11—H11B | 110.00 |
C7—C12—C13 | 128.23 (11) | H11A—C11—H11C | 109.00 |
C10—C12—C13 | 127.03 (12) | H11B—C11—H11C | 109.00 |
C7—C12—C10 | 104.53 (11) | ||
C10—O9—N8—C7 | 0.33 (15) | C1—C6—C7—C12 | 124.36 (16) |
N8—O9—C10—C11 | −178.39 (12) | C5—C6—C7—N8 | 122.44 (15) |
N8—O9—C10—C12 | −0.04 (15) | N8—C7—C12—C10 | 0.45 (16) |
O9—N8—C7—C12 | −0.47 (15) | N8—C7—C12—C13 | 175.43 (13) |
O9—N8—C7—C6 | 178.53 (11) | C6—C7—C12—C10 | −178.37 (14) |
C2—C1—C6—C5 | −0.1 (2) | C6—C7—C12—C13 | −3.4 (2) |
C6—C1—C2—C3 | −1.6 (3) | O9—C10—C12—C7 | −0.23 (15) |
C2—C1—C6—C7 | 176.80 (14) | O9—C10—C12—C13 | −175.28 (12) |
C1—C2—C3—C4 | 1.7 (3) | C11—C10—C12—C7 | 177.67 (16) |
C2—C3—C4—C5 | −0.2 (3) | C11—C10—C12—C13 | 2.6 (3) |
C3—C4—C5—C6 | −1.5 (3) | C7—C12—C13—O14 | 178.55 (13) |
C4—C5—C6—C7 | −175.22 (14) | C7—C12—C13—O15 | −3.3 (2) |
C4—C5—C6—C1 | 1.6 (2) | C10—C12—C13—O14 | −7.5 (2) |
C1—C6—C7—N8 | −54.40 (19) | C10—C12—C13—O15 | 170.61 (13) |
C5—C6—C7—C12 | −58.8 (2) |
Symmetry codes: (i) −x+3/2, y+1/2, −z−1/2; (ii) −x+2, −y, −z; (iii) −x+2, −y+1, −z; (iv) −x+3/2, y−1/2, −z−1/2.
Hydrogen-bond geometry (Å, º)
D—H···A | D—H | H···A | D···A | D—H···A |
O14—H14···O15ii | 0.82 | 1.81 | 2.6252 (18) | 172 |
C11—H11A···N8iv | 0.96 | 2.51 | 3.427 (2) | 159 |
Symmetry codes: (ii) −x+2, −y, −z; (iv) −x+3/2, y−1/2, −z−1/2.
Footnotes
Supplementary data and figures for this paper are available from the IUCr electronic archives (Reference: BG2504).
References
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Associated Data
This section collects any data citations, data availability statements, or supplementary materials included in this article.
Supplementary Materials
Crystal structure: contains datablock(s) global, I. DOI: 10.1107/S1600536813011410/bg2504sup1.cif
Structure factors: contains datablock(s) I. DOI: 10.1107/S1600536813011410/bg2504Isup2.hkl
Supplementary material file. DOI: 10.1107/S1600536813011410/bg2504Isup3.cml
Additional supplementary materials: crystallographic information; 3D view; checkCIF report