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Acta Crystallographica Section E: Structure Reports Online logoLink to Acta Crystallographica Section E: Structure Reports Online
. 2013 May 25;69(Pt 6):o961. doi: 10.1107/S1600536813013585

2-[(3,4-Di­chloro­benzyl­idene)amino]-4-methyl­phenol

Muhammet Kose a,*, Ilyas Gonul b, Vickie McKee c
PMCID: PMC3685100  PMID: 23795119

Abstract

In the title compound, C14H11Cl2NO, the dihedral angle between the benzene rings is 15.36 (8)°. A phenol–imine-type intra­molecular O—H⋯N hydrogen bond generates an S(5) ring motif. In the crystal, a pair of weak C—H⋯O hydrogen bonds form an R 2 1(7) ring motif involving glide-plane-related mol­ecules. The mol­ecules linked via these inter­actions form chains along [101].

Related literature  

For Schiff bases, see: Akine & Nabeshima (2009); Vigato & Tamburini (2004). For related structures, see: Efil et al. (2012); Fridman & Kaftory (2007); Jiao et al. (2006); Wang & Wang (2007). For hydrogen-bond motifs, see: Etter (1990); Bernstein et al. (1995).graphic file with name e-69-0o961-scheme1.jpg

Experimental  

Crystal data  

  • C14H11Cl2NO

  • M r = 280.14

  • Monoclinic, Inline graphic

  • a = 4.6074 (7) Å

  • b = 21.680 (3) Å

  • c = 12.7907 (18) Å

  • β = 93.342 (2)°

  • V = 1275.5 (3) Å3

  • Z = 4

  • Mo Kα radiation

  • μ = 0.49 mm−1

  • T = 150 K

  • 0.64 × 0.14 × 0.07 mm

Data collection  

  • Bruker APEXII CCD diffractometer

  • Absorption correction: multi-scan (SADABS; Sheldrick, 2009) T min = 0.743, T max = 0.966

  • 12828 measured reflections

  • 3159 independent reflections

  • 2556 reflections with I2σ(I)

  • R int = 0.032

Refinement  

  • R[F 2 > 2σ(F 2)] = 0.035

  • wR(F 2) = 0.094

  • S = 1.02

  • 3159 reflections

  • 164 parameters

  • H-atom parameters constrained

  • Δρmax = 0.35 e Å−3

  • Δρmin = −0.23 e Å−3

Data collection: APEX2 (Bruker, 1998); cell refinement: SAINT (Bruker, 1998); data reduction: SAINT; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008); molecular graphics: ORTEP-3 for Windows (Farrugia, 2012) and Mercury (Macrae et al., 2008); software used to prepare material for publication: SHELXTL (Sheldrick, 2008).

Supplementary Material

Crystal structure: contains datablock(s) I, global. DOI: 10.1107/S1600536813013585/fy2096sup1.cif

e-69-0o961-sup1.cif (16.6KB, cif)

Structure factors: contains datablock(s) I. DOI: 10.1107/S1600536813013585/fy2096Isup2.hkl

e-69-0o961-Isup2.hkl (155KB, hkl)

Supplementary material file. DOI: 10.1107/S1600536813013585/fy2096Isup3.cml

Additional supplementary materials: crystallographic information; 3D view; checkCIF report

Table 1. Hydrogen-bond geometry (Å, °).

D—H⋯A D—H H⋯A DA D—H⋯A
C5—H5⋯O1i 0.95 2.67 3.618 (2) 174
C8—H8⋯O1i 0.95 2.65 3.562 (2) 162
O1—H1⋯N1 0.81 2.16 2.6612 (17) 121

Symmetry code: (i) Inline graphic.

Acknowledgments

We are grateful to Loughborough University for the data collection and Cukurova University for financial support (to IG).

supplementary crystallographic information

Comment

Schiff base condensations yield compounds with wide uses as ligands (Akine et al., 2009; Vigato et al., 2004). The title compound was prepared as a part of an investigation of the coordination and biological properties of Schiff base ligands.

The title compound adopts E configuration with respect to the imine C=N double bond with a C9—C8—N1—C6 torsion angle = -179.98 (13)°. The azomethine (C8═N1) bond distance is 1.2765 (19) Å and within the normal C═N values. The dihedral angle between the two benzene rings is 15.36 (8)°. There is a phenol-imine type intramolecular hydrogen bond (O1H···N1) in the structure forming a S(5) hydrogen bonding motif. There are two intermolecular weak hydrogen bond type (C5H···O1 and C8H···O1) interactions, resulting in a R12(7) hydrogen-bonding motif. Molecules are linked via weak hydrogen bonding form hydrogen-bond chains along the ac diagonal (Fig. 2, Table 1).

There is evidence of π-π stacking in the structure. The C3—C9 section of the molecule is stacked with the C6*—C12* section of an adjacent molecule (* = x + 1, y, z). N1 and C10* are seperated by a distance of 3.302 (2) Å. There is also π-Cl interaction in the structure: Cl2 is stacked with C3** of an adjacent molecule (** = 1/2 - x, 1/2 + y, 3/2 - z) with a distance of 3.407 (2) Å (Fig. 3).

Experimental

A solution of 3,4-dichlorobenzaldehyde (0.0.525 g, 3 mmol) in methanol (25 ml) was added to a methanolic solution (20 ml) of 2-amino-4-methylphenol (0.740 g, 6 mmol). The mixture was stirred for two hours at room temperature and left for air evaporation. After two days, yellow crystals suitable for X-ray diffraction study were collected by filtration.

Refinement

H atoms bonded to C were inserted at calculated positions with C—H distances of 0.95 and 0.99 Å for non-saturated and saturated C atoms, respectively, They were refined using a riding model with Uiso(H) = 1.2 Ueq(C). The H-atom bonded to O1 was taken directly from the difference Fourier map and was refined with a riding model using temperature factors Uiso(H) = 1.5 Ueq(O).

Figures

Fig. 1.

Fig. 1.

Structure of the title compound. Thermal ellipsoids are drawn at 30% probability and the intramolecular hydrogen bond is shown as a dashed line.

Fig. 2.

Fig. 2.

Intra- and intermolecular hydrogen bonding in the structure

Fig. 3.

Fig. 3.

π-π and Cl-π interactions in the crystal of the title compound

Crystal data

C14H11Cl2NO F(000) = 576
Mr = 280.14 Dx = 1.459 Mg m3
Monoclinic, P21/n Mo Kα radiation, λ = 0.71073 Å
Hall symbol: -P 2yn Cell parameters from 3681 reflections
a = 4.6074 (7) Å θ = 2.5–28.0°
b = 21.680 (3) Å µ = 0.49 mm1
c = 12.7907 (18) Å T = 150 K
β = 93.342 (2)° Block, yellow
V = 1275.5 (3) Å3 0.64 × 0.14 × 0.07 mm
Z = 4

Data collection

Bruker APEXII CCD diffractometer 3159 independent reflections
Radiation source: fine-focus sealed tube 2556 reflections with I2σ(I)
Graphite monochromator Rint = 0.032
ω rotation with narrow frames scans θmax = 28.3°, θmin = 1.9°
Absorption correction: multi-scan (SADABS; Sheldrick, 2009) h = −6→6
Tmin = 0.743, Tmax = 0.966 k = −28→28
12828 measured reflections l = −17→16

Refinement

Refinement on F2 Primary atom site location: structure-invariant direct methods
Least-squares matrix: full Secondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.035 Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.094 H-atom parameters constrained
S = 1.02 w = 1/[σ2(Fo2) + (0.0503P)2 + 0.3141P] where P = (Fo2 + 2Fc2)/3
3159 reflections (Δ/σ)max = 0.001
164 parameters Δρmax = 0.35 e Å3
0 restraints Δρmin = −0.23 e Å3

Special details

Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.

Fractional atomic coordinates and isotropic or equivalent isotropic displacement parameters (Å2)

x y z Uiso*/Ueq
Cl1 0.62127 (9) 0.968261 (19) 0.61947 (3) 0.03521 (12)
N1 −0.1214 (3) 0.79478 (6) 0.73732 (10) 0.0234 (3)
O1 −0.4296 (3) 0.77697 (6) 0.55736 (9) 0.0381 (3)
H1 −0.2991 0.7997 0.5779 0.057*
C1 −0.4801 (3) 0.73837 (7) 0.63921 (12) 0.0264 (3)
Cl2 0.86902 (8) 1.020614 (17) 0.83841 (3) 0.03076 (12)
C2 −0.6873 (4) 0.69200 (8) 0.62554 (13) 0.0321 (4)
H2 −0.7926 0.6872 0.5600 0.039*
C3 −0.7391 (3) 0.65297 (7) 0.70787 (14) 0.0322 (4)
H3 −0.8816 0.6215 0.6982 0.039*
C4 −0.5859 (3) 0.65887 (7) 0.80533 (13) 0.0297 (3)
C5 −0.3799 (3) 0.70580 (7) 0.81783 (12) 0.0261 (3)
H5 −0.2752 0.7107 0.8835 0.031*
C6 −0.3245 (3) 0.74577 (7) 0.73566 (11) 0.0228 (3)
C7 −0.6423 (4) 0.61546 (8) 0.89403 (15) 0.0406 (4)
H7A −0.5103 0.6252 0.9546 0.061*
H7B −0.6092 0.5729 0.8718 0.061*
H7C −0.8439 0.6200 0.9133 0.061*
C8 0.0181 (3) 0.81112 (7) 0.82195 (12) 0.0235 (3)
H8 −0.0153 0.7899 0.8851 0.028*
C9 0.2291 (3) 0.86195 (7) 0.82415 (11) 0.0216 (3)
C10 0.3150 (3) 0.88903 (7) 0.73156 (12) 0.0233 (3)
H10 0.2364 0.8745 0.6658 0.028*
C11 0.5146 (3) 0.93697 (7) 0.73568 (11) 0.0235 (3)
C12 0.6295 (3) 0.95870 (7) 0.83241 (12) 0.0233 (3)
C13 0.5479 (3) 0.93173 (7) 0.92445 (12) 0.0245 (3)
H13 0.6282 0.9461 0.9901 0.029*
C14 0.3485 (3) 0.88372 (7) 0.92030 (12) 0.0239 (3)
H14 0.2924 0.8654 0.9835 0.029*

Atomic displacement parameters (Å2)

U11 U22 U33 U12 U13 U23
Cl1 0.0427 (3) 0.0358 (2) 0.0276 (2) −0.00705 (17) 0.00626 (17) 0.00436 (15)
N1 0.0204 (6) 0.0227 (6) 0.0268 (6) −0.0010 (5) −0.0001 (5) −0.0005 (5)
O1 0.0430 (7) 0.0457 (7) 0.0249 (6) −0.0154 (6) −0.0044 (5) 0.0008 (5)
C1 0.0253 (8) 0.0272 (8) 0.0270 (8) −0.0017 (6) 0.0029 (6) −0.0035 (6)
Cl2 0.0272 (2) 0.0259 (2) 0.0390 (2) −0.00604 (14) 0.00070 (15) −0.00215 (15)
C2 0.0267 (8) 0.0361 (9) 0.0332 (9) −0.0049 (7) −0.0002 (6) −0.0109 (7)
C3 0.0243 (8) 0.0262 (8) 0.0466 (10) −0.0060 (6) 0.0076 (7) −0.0110 (7)
C4 0.0276 (8) 0.0223 (7) 0.0403 (9) −0.0003 (6) 0.0102 (7) −0.0023 (6)
C5 0.0247 (7) 0.0237 (7) 0.0299 (8) 0.0007 (6) 0.0016 (6) −0.0017 (6)
C6 0.0188 (7) 0.0219 (7) 0.0279 (8) −0.0002 (5) 0.0026 (6) −0.0040 (6)
C7 0.0455 (11) 0.0269 (9) 0.0508 (11) −0.0042 (7) 0.0135 (9) 0.0033 (8)
C8 0.0206 (7) 0.0239 (7) 0.0258 (7) 0.0006 (5) 0.0007 (5) 0.0012 (6)
C9 0.0179 (7) 0.0214 (7) 0.0252 (7) 0.0024 (5) −0.0003 (5) −0.0003 (5)
C10 0.0219 (7) 0.0239 (7) 0.0237 (7) 0.0016 (5) −0.0018 (5) −0.0020 (6)
C11 0.0234 (7) 0.0228 (7) 0.0246 (7) 0.0037 (6) 0.0037 (6) 0.0027 (6)
C12 0.0187 (7) 0.0199 (7) 0.0311 (8) 0.0011 (5) 0.0003 (6) −0.0012 (6)
C13 0.0228 (7) 0.0260 (7) 0.0241 (7) 0.0015 (6) −0.0031 (6) −0.0027 (6)
C14 0.0219 (7) 0.0260 (7) 0.0234 (7) 0.0017 (6) −0.0014 (5) 0.0020 (6)

Geometric parameters (Å, º)

Cl1—C11 1.7310 (15) C5—H5 0.9500
N1—C8 1.2766 (19) C7—H7A 0.9800
N1—C6 1.4153 (19) C7—H7B 0.9800
O1—C1 1.3708 (19) C7—H7C 0.9800
O1—H1 0.8089 C8—C9 1.469 (2)
C1—C2 1.390 (2) C8—H8 0.9500
C1—C6 1.399 (2) C9—C10 1.399 (2)
Cl2—C12 1.7366 (15) C9—C14 1.400 (2)
C2—C3 1.382 (2) C10—C11 1.387 (2)
C2—H2 0.9500 C10—H10 0.9500
C3—C4 1.402 (2) C11—C12 1.399 (2)
C3—H3 0.9500 C12—C13 1.386 (2)
C4—C5 1.394 (2) C13—C14 1.387 (2)
C4—C7 1.508 (2) C13—H13 0.9500
C5—C6 1.397 (2) C14—H14 0.9500
C8—N1—C6 121.40 (13) H7A—C7—H7C 109.5
C1—O1—H1 106.3 H7B—C7—H7C 109.5
O1—C1—C2 119.44 (14) N1—C8—C9 121.64 (14)
O1—C1—C6 120.14 (13) N1—C8—H8 119.2
C2—C1—C6 120.42 (15) C9—C8—H8 119.2
C3—C2—C1 119.65 (15) C10—C9—C14 119.09 (13)
C3—C2—H2 120.2 C10—C9—C8 121.20 (13)
C1—C2—H2 120.2 C14—C9—C8 119.71 (13)
C2—C3—C4 121.39 (15) C11—C10—C9 120.12 (13)
C2—C3—H3 119.3 C11—C10—H10 119.9
C4—C3—H3 119.3 C9—C10—H10 119.9
C5—C4—C3 118.21 (15) N1i—C10—H10 94.2
C5—C4—C7 121.01 (16) C10—C11—C12 120.13 (14)
C3—C4—C7 120.79 (15) C10—C11—Cl1 118.82 (11)
C4—C5—C6 121.28 (15) C12—C11—Cl1 121.04 (12)
C4—C5—H5 119.4 C13—C12—C11 120.12 (14)
C6—C5—H5 119.4 C13—C12—Cl2 119.45 (11)
C5—C6—C1 119.04 (14) C11—C12—Cl2 120.41 (12)
C5—C6—N1 127.15 (13) C12—C13—C14 119.73 (14)
C1—C6—N1 113.81 (13) C12—C13—H13 120.1
C4—C7—H7A 109.5 C14—C13—H13 120.1
C4—C7—H7B 109.5 C13—C14—C9 120.80 (14)
H7A—C7—H7B 109.5 C13—C14—H14 119.6
C4—C7—H7C 109.5 C9—C14—H14 119.6
O1—C1—C2—C3 −179.97 (15) N1—C8—C9—C10 −8.8 (2)
C6—C1—C2—C3 −0.1 (2) N1—C8—C9—C14 171.57 (14)
C1—C2—C3—C4 −0.3 (2) C14—C9—C10—C11 −0.3 (2)
C2—C3—C4—C5 0.6 (2) C8—C9—C10—C11 180.00 (13)
C2—C3—C4—C7 −179.26 (15) C9—C10—C11—C12 −0.4 (2)
C3—C4—C5—C6 −0.5 (2) C9—C10—C11—Cl1 178.69 (11)
C7—C4—C5—C6 179.34 (15) C10—C11—C12—C13 1.1 (2)
C4—C5—C6—C1 0.1 (2) Cl1—C11—C12—C13 −178.00 (11)
C4—C5—C6—N1 −179.53 (14) C10—C11—C12—Cl2 −177.57 (11)
O1—C1—C6—C5 −179.95 (14) Cl1—C11—C12—Cl2 3.38 (18)
C2—C1—C6—C5 0.2 (2) C11—C12—C13—C14 −1.0 (2)
O1—C1—C6—N1 −0.2 (2) Cl2—C12—C13—C14 177.67 (11)
C2—C1—C6—N1 179.88 (14) C12—C13—C14—C9 0.2 (2)
C8—N1—C6—C5 −6.9 (2) C10—C9—C14—C13 0.4 (2)
C8—N1—C6—C1 173.46 (14) C8—C9—C14—C13 −179.91 (13)
C6—N1—C8—C9 −179.98 (13)

Symmetry code: (i) x+1, y, z.

Hydrogen-bond geometry (Å, º)

D—H···A D—H H···A D···A D—H···A
C5—H5···O1ii 0.95 2.67 3.618 (2) 174
C8—H8···O1ii 0.95 2.65 3.562 (2) 162
O1—H1···N1 0.81 2.16 2.6612 (17) 121

Symmetry code: (ii) x+1/2, −y+3/2, z+1/2.

Footnotes

Supplementary data and figures for this paper are available from the IUCr electronic archives (Reference: FY2096).

References

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  3. Bruker (1998). APEX2 and SAINT Bruker AXS Inc., Madison, Wisconsin, USA.
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  6. Farrugia, L. J. (2012). J. Appl. Cryst. 45, 849–854.
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  8. Jiao, Y.-H., Zhang, Q. & Ng, S. W. (2006). Acta Cryst. E62, o3614–o3615.
  9. Macrae, C. F., Bruno, I. J., Chisholm, J. A., Edgington, P. R., McCabe, P., Pidcock, E., Rodriguez-Monge, L., Taylor, R., van de Streek, J. & Wood, P. A. (2008). J. Appl. Cryst. 41, 466–470.
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  11. Sheldrick, G. M. (2009). SADABS University of Göttingen, Germany.
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  13. Wang, Q. & Wang, D.-Q. (2007). Acta Cryst. E63, o4838.

Associated Data

This section collects any data citations, data availability statements, or supplementary materials included in this article.

Supplementary Materials

Crystal structure: contains datablock(s) I, global. DOI: 10.1107/S1600536813013585/fy2096sup1.cif

e-69-0o961-sup1.cif (16.6KB, cif)

Structure factors: contains datablock(s) I. DOI: 10.1107/S1600536813013585/fy2096Isup2.hkl

e-69-0o961-Isup2.hkl (155KB, hkl)

Supplementary material file. DOI: 10.1107/S1600536813013585/fy2096Isup3.cml

Additional supplementary materials: crystallographic information; 3D view; checkCIF report


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