Abstract
This studay is to construct a lentiviral vector harbouring an RNA interference (RNAi) sequence that targets the gene encoding the human high-mobility group nucleosomal binding protein 1 (NSBP1); to study its role in inducing G2/M phase arrest and apoptosis in prostate cancer (PCa) DU145 cells; and to assess the effect of its knockdown on cell proliferation in vitro and in vivo. RNAi was applied to knock down NSBP1 expression in the PCa cell line DU145 by lentiviral plasmids producing an NSBP1 small hairpin RNA. After NSBP1 knockdown in DU145 cells, the growth rate of cells was analyzed by MTT, and G2/M cell cycle arrest and apoptosis were assessed using a FACScalibur flow cytometer. Tumour growth was assessed in nude mice. The mRNA and protein expression levels of NSBP1, cyclin B1 and Bcl-2 were analysed in vitro and in vivo by reverse-transcriptase polymerase chain reaction and Western blotting. Knockdown of NSBP1 resulted in a 22.6% decrease in the growth rate of cells compared with the PscNC lentivirus control cells at 96 h, decreased tumour growth in nude mice, and the induction of G2/M cell cycle arrest (8.78%) and apoptosis (2.19-fold). Consistent with the cell cycle arrest and apoptosis, the mRNA and protein expression levels of cyclin B1 and Bcl-2 were decreased. In conclusion, knockdown of NSBP1 causes a statistically significant inhibition of the in vitro and in vivo growth of the PCa cell line DU145. Growth suppression is at least partially due to NSBP1 knockdown-induced G2/M cell cycle arrest and apoptosis. The present data provide the evidence that the NSBP1 knockdown-induced G2/M phase arrest and apoptosis may result from negative regulation of cyclin B1 and Bcl-2 by NSBP1, with the resulting reduced expression of these proteins.
Keywords: apoptosis, NSBP1, proliferation, prostate cancer, RNA interference
Introduction
The incidence of prostate cancer (PCa) is the highest among all non-skin cancers in the United States, and it is the second leading cause of cancer-related death among American men 1. Many different genes are involved in the initiation and progression of PCa. Recent studies have shown that the nucleosome-binding protein 1 (NSBP1) gene is expressed at high levels in PCa tissues and cells 2, 3. NSBP1 belongs to the high-mobility group nucleosome-binding proteins (HMGNs), which includes HMGN1 and HMGN2, that bind to nucleosome core particles in a sequence-independent manner 4, 5. HMGN proteins are expressed in the nucleus and cytoplasm 6, 7, and they bind DNA transiently, continuously moving to other binding sites within the chromatin 8. These proteins appear to regularly associate with and dissociate from nucleosomes, which reduces the compaction of chromatin fibre 7, 9. HMGN proteins therefore modify the structure of chromatin to attain a conformation that facilitates and enhances transcription, histone modifications, replication and repair 10, 11, 12.
HMGN proteins are found only in vertebrates, and detailed developmental studies on HMGN expression patterns in Xenopus and in mice show that the expression level of HMGN proteins is tightly linked to differentiation 13, 14. During mouse embryogenesis, these HMGN genes are progressively downregulated throughout the entire embryo except in committed but continuously renewing cell types undergoing active differentiation, such as the basal layer of the epithelium or in kidney cells undergoing mesenchyme to epithelium transition 14, 15, 16. Recent studies show that HMGN can associate with mitotic chromatin and that the interaction of HMGNs with chromatin is cell cycle dependent 17. Hmgn1−/− mice fibroblasts have an altered G2/M checkpoint action 18. Dysregulation of the cellular levels of NSBP1 alters the transcription level of numerous genes 19. However, the specific role of NSBP1 in cell proliferation is not clear.
Our previous studies revealed that the downregulation of NSBP1 gene expression can cause G2 cell cycle arrest and decrease the proliferation rate of lymph node carcinoma using PCa (LNCaP) cells 20. However, the effect of this downregulation on androgen-independent PCa DU145 cells in vitro and in vivo remains unclear. The aim of the present study was to construct a lentiviral vector harbouring an RNA interference (RNAi) sequence that targets the human high-mobility group gene NSBP1 and study its role in the in vitro and in vivo growth of cells. These data proved that knockdown of NSBP1 induced G2M phase arrested and the apoptosis may be the result of negative regulation of cyclin B1 and Bcl-2 with reduced expression of their proteins by NSBP1.
Materials and methods
Cell culture
The DU145 cell line (American Type Culture Collection) was obtained from the Institute of Urology, Peking University First Hospital (Beijing, China). Human PCa cells were cultured in RPMI1640 medium containing 10% fetal calf serum (Cell Centre of Peking Union Medical College, Beijing, China). The cells were maintained at 37ºC in a humidified chamber containing 5% CO2/95% air.
Materials
Specific antibodies against NSBP1 were obtained from the Prostate Disease Prevention and Cure Centre of Ji Lin University (Jilin, China). Antibodies against Bcl-2 (mouse polyclonal antibodies) and cyclin B1 (rabbit polyclonal antibodies), secondary rabbit anti-mouse IgG and goat anti-rabbit IgG were obtained from Santa Cruz Biotechnology (Santa Cruz, CA, USA). Lentivirus was purchased from Shanghai Genechem Inc. (Shanghai, China). The Wizard® PureFection plasmid DNA purification system and Moloney murine leukemia virus (MMLV) reverse transcriptase were obtained from Promega Corp. (Madison, WI, USA) and LipofectAMINE 2000 from Invitrogen (Carlsbad, CA, USA).
Lentivirus vector construction for RNAi
The lentivirus vector system is composed of the vectors pGCSIL-GFP, pHelper1.0 (gag/pol element) and Helper2.0 (VSVG element). The plasmid pGCSIL-GFP stably expressed siRNA and a marker (GFP-RFP fusion protein). The vectors pHelper1.0 and pHelper2.0 contain virus package imperative elements. The siRNA sequences targeting the human NSBP1 (Gene ID, NM_030763) transcript were designed using the software developed by Ambion Inc. (Foster, CA, USA). PscSI616 (CACAGCCTTTCTTTAGCATTTCAAGAGAATGCTAAAGAAAGGCTGTG/CACAGCCTTT CTTTAGCATTCTCTTGAAATGCTAAAGAAAGGCTGTG) were selected for RNAi, and siRNA duplexes were verified for specificity by BLAST searches against the human genome. PscNC (TTCTCCGAACGTGTCACGTTTCAAGAGA ACGTGACACGTTCGGAGAA/TTCTCCGAACGTGTCACGTTCTCTTGAA ACGTGACACGTTCGGAGAA) was used as a negative control and showed no homology to any human transcripts. Oligonucleotides were cloned into the U6 promoter-containing pGCSIL-GFP vector between the AgeI and EcoRI sites. DNA sequence analysis was done to confirm the sequences of the inserts.
Western blot analysis
Whole-cell extracts were prepared in lysis buffer (50 mmol L−1 Tris-HCl [pH 7.4], 150 mmol L−1 NaCl, 1 mmol L−1 EDTA, 0.25% Na-deoxycholate and 1% NP40). The protein concentration of the extract was determined by performing a Bradford assay. Protein (50 μg) was resolved by SDS-PAGE and probed by immunoblot using the antibodies mentioned in the figure legends. Immunodetection was performed using enhanced chemiluminescence.
Reverse-transcriptase polymerase chain reaction (RT-PCR) and TaqMan real-time RT-PCR analysis
DU145 cells were grown in RPMI1640 containing 10% fetal calf serum for 3 days and then transfected with lentivirus; 4 h before transfection, cells were placed in serum-free media. Five days post-transfection, total RNA was isolated using the Trizol reagent. First-strand cDNA was generated using 2 μg of total RNA via MMLV-reverse transcriptase. From each sample, 100 ng of total RNA was used to determine the specific RNA level by TaqMan real-time RT-PCR using an ABI Prism 7300 (Applied Biosystems, Foster City, CA, USA). The specific primers used to amplify the NSBP1 gene were as follows: NSBP1, 5′-GCAGTCAGGCAGTGACTGCCTTCG-3′ (forward) and 5′-CCCTTTTCTGTGGCATCTTC-3′ (reverse) and 5′-CAGTTGTTGAAGAAGACTACAAT-3′ (probe). The primers for human GAPDH were as follows: 5′-CAGTCAGCCGCATCTTCTTTT-3′ (forward), 5′-GTGACCAGGCGCCCAATAC-3′ (reverse) and 5′-CGTCGCCAGCCGAGCCACA-3′ (probe). The primers for human Bcl-2 were as follows: 5′-GGGAGGATTGTGGCCTTCTT-3′ (forward), 5′-TCATCCACAGGGCGATGTT-3′ (reverse) and 5′-TCAACCGGGAGATGTCGCCCC-3′ (probe). The primers for human cyclin B1 were as follows: 5′-AGCCTGTTAAAGAAGAAAAACTTTCG-3′ (forward), 5′-ATTACATCAGAGAAAGCCTGACACA-3′ (reverse) and 5′-ATACTGCCTCTCCAAGCCCAATGGAAAC-3′ (probe). The 5′-end of all probes was labelled with the reporter fluorescent dye FAM. The 3′-end of all probes was labelled with the quencher dye TAMRA. Typically, thermal cycling was initiated with a denaturation step for 5 min at 94ºC followed by 4 cycles done in three steps: 30 s at 94ºC, 30 s at 55.5ºC and 1 min at 72ºC. Results are expressed as the ratio of NSBP1, Bcl-2 and cyclin B1 to GAPDH. Duplicate reactions for each sample were done, and the standard curve method was used for analysing data.
Cytoactive assays
DU145 cells were seeded at a density of 3 000 cells per well in 96-well microplates and grown overnight. Four hours before transfection, cells were changed to serum-free media and transfected with lentivirus (3 × 104 per well) for 0, 24, 48, 72 or 96 h. At the end of culture, 50 μL of MTT (2.5 mg mL−1) was added to each well, cell plates were placed at 37ºC for 4 h, and 200 μL of dimethylsulfoxide was added to each well to lyse the cells. Absorbance was measured at 570 nm using a multiwell spectrophotometer.
Apoptosis assay
After trypsinization, DU145 cells were plated in six-well plates at a density of 0.5 × 105 to 1 × 105 per well. These plates were placed in a 37ºC, 5% CO2 incubator. Three days later, cells were transfected with the lentivirus (1 × 107 per well); 4 h before the transfection, cells were changed to serum-free media. After 24, 48, 72 or 96 h of incubation, cells were gently trypsinized and washed with ice-cold PBS. Cells were resuspended in 100 μL of 1 × binding buffer, stained with 5 μL of FITC-Annexin V (25 μg mL−1) and 5 μL propidium iodide. Cells were incubated for 15 min on ice in the dark. Every sample was diluted with 385 μL of 1 × binding buffer (10 mmol L−1 HEPES buffer solution [pH 7.4], 150 mmol L−1 NaCl, 1 mmol L−1 CaCl2) and immediately analysed with a FACScalibur flow cytometer (Becton Dickinson, Erembodegem, Belgium). At least 10 000 cells were detected for each sample.
Cell cycle analysis
DU145 cells (0.2 × 106–0.8 × 106) were plated in 25 cm2 flasks. After cells grew to 90%–95% confluency, media was changed to serum-free RPMI1640 for 24 h. Cells were infected with NSBP1-KO lentivirus (1 × 107 per flask) and cultured for 24, 48, 72 or 96 h. At the end of incubation, cells were harvested by gentle trypsinization, washed with cold PBS (calcium and magnesium free), and collected by centrifugation. For cell cycle analysis, ∼106 cells were resuspended in 1 mL PBS and fixed in 75% ice-cold ethanol with a 24-h incubation at −20ºC. After brief centrifugation, cells were washed once with PBS and incubated for 30 min at 37ºC in PBS containing 40 μg mL−1 of propidium iodide and 100 U RNase. For each tube, 20 000 cells were immediately measured on a FACScalibur flow cytometer using CellQuest Pro Software (BD company, Franklin Lakes, NJ, USA).
Tumourigenesis assay in nude mice
Uninfected and lentivirus-infected cells were cultured in 100-mm dishes. The cells in exponential growth stage were trypsinized, washed twice with serum-free RPMI 1640 medium and resuspended in PBS. The cells (2 × 106/0.2 mL) were injected subcutaneously on the right flank of Balb/c nude mice (Nu/Nu, male, 5–6 weeks old, 8 per group). The formation of subcutaneous tumours was monitored and measured with a digital calliper. The tumour volumes were calculated based on the formula LW2/2, where L is the length and W is the shortest width of the tumour. After 34 days, the nude mice were killed. All procedures for animal studies were conducted in compliance with the policies and regulations of Peking University Institutional Animal Care and Use Committee (Beijing, China).
Statistical analysis
Statistical analysis was done with SPSS 13.0 (SPSS, San Jose, CA, USA). Results are expressed as the mean ± SD of at least triplicate determination, and statistical comparisons are based on ANOVA. P < 0.05 was considered significant.
Results
Suppression of NSBP1 expression by RNAi
A previous study by our group measured NSBP1 expression levels in PCa tissue and normal prostate tissue using an improved mRNA differential display technique and found significantly higher NSBP1 levels in PCa tissue 2.
To assess whether endogenous NSBP1 expression is essential for the growth of PCa DU145 cells, lentivirus short hairpin constructs against NSBP1 (PscSI616) were designed and the capacity of siRNA suppressing the expression of NSBP1 was examined. The effect of siRNA on the protein and mRNA levels of NSBP1 was examined by western blot analysis and real-time quantitative RT-PCR. Transfection efficiency was analysed by fluorescence-activated cell sorting (FACS); GFP+ cells were detected 30 h after infection and peaked at 96 h, typically in about 80% of cells.
The expression level of the NSBP1 mRNA (5 days after infection) and protein (7 days after infection) were measured by comparison with a PscNC control and the mRNA inhibitory efficiency was found to be 75.6% (Figure 1A), while the protein inhibitory efficiency was 75.1% (Figure 1B). Assessment of the expression levels in nude mice tumour tissues showed that mRNA inhibitory efficiency was 72.2% (Figure 1C) and the protein inhibitory efficiency was 74.1% (Figure 1D).
Knockdown of NSBP1 expression inhibits PCa DU145 cell proliferation in vitro and in vivo
Equal numbers of DU145 cells and PscSI616 and PscNC lentivirus were transfected at 24, 48, 72 and 96 h, and cell growth activity was detected using the MTT assay for the DU145 cells. After 72 h, a decrease in the growth of DU145 cells was observed, and at 96 h, DU145 cells infected with the PscSI616 lentivirus showed a decrease in growth rate of about 22.6% compared with the PscNC lentivirus control cells (Figure 2A). These findings support the notion that NSBP1 has an important regulatory role in androgen-independent PCa cell proliferation.
The effects of NSBP1 knockdown on tumourigenicity were examined in a xenograft model. At week 2, tumours began to appear, and after 34 days, the mice were killed. Transfected PscSI616 lentivirus cell tumours showed a 40% decrease in tumour size, compared with PscNC controls (Figure 2B). These data provide further evidence that NSBP1 suppression abrogates oncogenic potential in vivo.
Knockdown of NSBP1 expression induces G2/M phase arrest and cell apoptosis in PCa DU145 cells
In view of the decreased proliferation of PCa DU145 cells in vitro following the loss of NSBP1, it is predicted that silencing NSBP1 will likewise inhibit cell cycle progression. At the 24-, 48-, 72- and 96-h time points, cell cycle G2/M, S and G1 phase were analyzed by flow cytometry after transfection with the PscSI616 and PscNC lentivirus. Loss of NSBP1 expression increased the number of cells at G2/M phase by 5.94% (Figure 3A) and 8.78% (Figure 3B) in comparison with PscNC controls at 72 and 96 h, respectively. Loss of NSBP1 expression also caused an increase of cells in S phase of 0.3% (Figure 3A) and 15.26% (Figure 3B) at 72 and 96 h, respectively. Taken together, these findings suggest that NSBP1 is important for androgen-independent prostate cell proliferation and cell cycle progression.
The observed inhibition of PCa cell proliferation and cell cycle progression following the loss of NSBP1 suggests that NSBP1 might function, at least in part, by promoting cell survival. To address this issue more closely, DU145 cells were transfected with PscSI616 and PNC lentivirus and cell death was measured by flow cytometry. When compared with cells transfected with PscNC lentivirus, loss of NSBP1 increased apoptosis 1.45- and 2.19-fold (Figures 3C and D) at 72 and 96 h, respectively. Thus, the findings suggest that NSBP1 also promotes PCa cell survival.
Effects of NSBP1 on gene expression, tumour cell proliferation and apoptosis-related regulators in vitro and in vivo
To understand the molecular basis for the NSBP1-knockdown-induced cell cycle arrest and apoptosis in the DU145 cells, mRNA and protein expression levels of cyclin B1 and Bcl-2 were analysed. Western blot analysis showed that cyclin B1 and Bcl-2 expression were reduced by approximately 20.0% and 46.8%, respectively (Figure 4B) in PscSI616 lentivirus-transfected cells compared with PscNC control cells. The mRNA expression of these proteins was detected using RT -PCR, and the results showed that cyclin B1 and Bcl-2 mRNA expression decreased about 28.2% and 49.5% (Figure 4A). Cyclin B1 and Bcl-2 protein expression in nude mice tumour tissues decreased by 26.8% and 45.3% (Figure 4C), and mRNA expression decreased by 23.2% and 53.7% (Figure 4A).
These data provide the evidence that NSBP1 knockdown may have induced G2/M arrest and apoptosis due to a reduction in the expression of cyclin B1 and Bcl-2 proteins.
Discussion
The NSBP1 gene was identified by King 5 in 2001 at sites in the chromosomal segment Xq 13.3 between DXS983 and DXS995. This gene is 8 600 bp long and contains 6 exons and 5 introns. The whole cDNA sequence contains 1 865 bp and encodes a 282-amino-acid nucleoprotein.
In this study, we successfully constructed an efficient target sequence to knock down endogenous NSBP1 expression. The silencing of NSBP1 in DU145 cells inhibited cell growth. In an in vivo study, the downregulation of NSBP1 reduced the cancer growth rate, whereas tumourigenicity was not influenced. These results suggest that NSBP1 might function as a nucleosomal binding element and transcriptional activating protein, enhancing the growth of DU145 cells. NSBP1 might have an important role in the proliferation of PCa cells and might be involved in the multigene-related and multistep carcinogenesis of PCa.
One notable effect was a decrease in the cell proliferation rate in vitro and in vivo. These results suggest that NSBP1 expression influences proliferation rates in DU145 cells. One possible explanation for this phenomenon could be a decrease in the expression of cell cycle proteins or an increase in the steady-state levels of apoptosis in PCa cells. The cell cycle is a highly regulated process involving cyclins (cyclin D1, cyclin B1) 21, 22. The cyclin B1/CDK1 complex is required for correct transition from the G2 to the M phase of the cell cycle; in late G2, there is an increase in cyclin B1 transcription that is necessary for the initiation of mitosis 23. Cyclin B1 has an important role in G2/M transition 24. Therefore, decreased expression of cyclin B1 may reduce the kinase activity of cyclin B1–cdc2 complexes in DU145 cells, thereby delaying the exit from the G2/M phase. We found that the expression levels of cyclin B1 mRNA and protein decreased slightly by about 19.7% and 20.0% in vitro, respectively, and 23.2% and 26.8% in vivo. These experiments showed that NSBP1 knockdown may affect cyclin B1 gene transcription and reduce the expression of cyclin B1 mRNA and protein, and that NSBP1 is actively involved in cell cycle regulation.
The rate of cancer cell growth can be determined by the rates of cell proliferation and cell death 25, 26. Apoptosis is an important physiological mechanism in the regulation of cell growth 27, 28, 29. Mitotic death often occurs in G2/M phase-arrested cells after incomplete or defective mitosis 30. In this study, we examined the fate of NSBP1 knockdown-induced G2/M arrest. It was apparent from the increase in the numbers of dead cells and the decreased number of cells in the G2/M phase that NSBP1 knockdown leads to mitotic cell death. The Bcl-2 gene is known as an inhibitor of apoptosis, and it may be considered a generalised cell death suppressor gene 31. We found that Bcl-2 mRNA and protein expression decreased by about 52.1% and 46.8% in vitro, respectively, and 53.7% and 45.3% in vivo. Therefore, the reduction of Bcl-2 expression at the basal level induced by the suppression of endogenous NSBP1 in DU145 cells suggests that NSBP1 may be actively involved in cell apoptosis regulation. It is unclear whether NSBP1-mediated regulation of cyclin B1 and Bcl-2 is direct or through other transcription factors. NSBP1 may bind to the cyclin B1 promoter or its protein may combine with C-myc protein, acting on the cyclin B1 promoter and regulating cyclin B1 transcription. Further studies are required to better understand the mechanism underlying this regulatory process.
In summary, a positive correlation was observed between NSBP1 expression and cell proliferation and apoptosis in DU145 cells. NSBP1 has an important role in the cell cycle and apoptosis of DU145 cells by regulating the expression of cyclin B1 and Bcl-2, which are essential for proper regulation of the S–G2–M phases and apoptosis. Endogenous expression of NSBP1 is required for the proper execution of the cell cycle and for cell proliferation in androgen-independent PCa cells. HMGN proteins are the only well-characterized proteins known to bind specifically to the 147-bp nucleosome core particle and affect chromatin structure and activity; this suggests that NSBP1 may be important in regulating cell proliferation and development in humans and may be a potential therapeutic target in androgen-independent PCa.
Acknowledgments
This work was supported by grants from the National Natural Science Foundation of China (Nos. 30271295 and 30672099) and Beijing Natural Science Foundation of China (No. 7092101).
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